DOI:
10.1039/C6RA11867D
(Paper)
RSC Adv., 2016,
6, 93602-93620
Microbial assisted industrially important multiple enzymes from fish processing waste: purification, characterization and application for the simultaneous hydrolysis of lipid and protein molecules
Received
7th May 2016
, Accepted 13th September 2016
First published on 15th September 2016
Abstract
Fish processing waste (FPW) was evaluated as the substrate for the concomitant production of industrially important alkaline lipase and protease by Streptomyces thermolineatus for the hydrolysis of lipid and protein rich FPW. The FPW contributed to the effective growth of the organism and also aided the enzyme production. Media optimization was performed using response surface methodology for maximum enzyme production (lipase 402 U ml−1; protease 896 U ml−1). The enzymes were purified with ammonium sulphate precipitation, dialysis, and gel filtration chromatography and achieved a specific activity of lipase and protease of 903 and 2539 U mg−1 respectively, and purity of 8.6 and 10.8 fold respectively. The purified enzymes were stable over a wide range of temperatures (30–70 °C), pH (6.5–9.5), organic solvents and surfactants, with higher affinities for their substrates. Hydrolysis studies showed that the purified lipase and protease hydrolysed 76 and 86% of lipid and protein respectively. In conclusion, these enzymes have great potential for industrial applications especially treating waste containing multiple substrates.
1. Introduction
The food processing industries, slaughter houses, oil processing and refineries, dairy industries, etc. generate considerable amounts of lipid and protein-rich solid waste that are used in the production of low value-added products.1 The fish processing waste (FPW) produced during fish processing is rich in lipids and proteins. The FPW is usually discharged into the marine environment, dewatered and landfilled/composted or sent to a fishmeal plant which contributes to environmental problems and also increases cost in terms of transportation and processing.2 In order to minimise the problems related to disposing of the FPW, these wastes are used as ingredients in the preparation of low value-added products like animal feed.3
The fish processing industries face major problems in handling these wastes and their disposal. The presence of lipid and protein increases the COD, BOD and organic matter.4 Despite of the biodegradability of lipid and protein molecules, their degradation is difficult because of the varied structure, solubility and the substrate specificity among them.5 Hence, there is a need of specific enzymes which are produced from specific substrates/wastes (lipid or protein) to degrade the respective wastes effectively.
The present study dealt with the microbial utilization of FPW and production of high value-added enzymes such as lipase and protease for industrial applications. The usage of combination of enzymes like lipase and protease for the treatment of lipid and protein rich waste is gaining interest nowadays as it is specific and environmentally safe. There are several industrially important strains one being Streptomyces species which produces many secondary metabolites and enzymes with different substrate specificities.6,7 The variety of secondary metabolites and enzymes produced by the Streptomyces sp. are of extracellular nature which is considered as “generally regarded as safe” (GRAS) according to food and drug administration.8 Various Streptomyces sp. are reported to produce extracellular protease9–11 and lipase.12–14 But there is no report on the concomitant production of lipase and protease by Streptomyces sp. to the best of our knowledge. Also, there is no literature on the production of lipase or protease from Streptomyces thermolineatus. The Streptomyces sp. used in our study produced both lipase and protease by utilizing the FPW as the substrate.
The production of industrially important enzymes like lipase and protease using a single fermentation medium would greatly reduce the production and purification cost. Very few reports are available on the concomitant production and purification of lipase and protease which would be applicable for the processes requiring both lipase and protease.15 It is also mandatory that the produced lipase must be proteolytic resistant in order to perform its function in presence of protease.
The culture conditions like the physicochemical parameters, nutritional requirements and components present in the media not only interfere with the extracellular enzyme production but also vary for different organisms and different substrates and hence careful efforts must be taken to maximise the enzyme production. In the modern biotechnological era, the statistical approach, response surface methodology (RSM) is an effective tool, used for multiple variable optimization utilizing the basic principles of statistics, randomization, replication and duplication.16 RSM enables the identification of optimum conditions, significant factors involved and their interactions and also to quantify the relationship of the responses and important input factors in limited number of experiments.17
In the present investigation, the FPW was evaluated for its usability as substrate for the concomitant production of enzymes in a single fermentation system. In order to hydrolyse the FPW and to concomitantly produce lipase and protease, Streptomyces sp. was chosen as it is an industrially important organism that produces enzymes with different substrate specificity, high activity and a wide temperature and pH stability. The organism S. thermolineatus was used for the biodegradation of FPW containing lipid and protein and simultaneously produces lipase and protease. The culture conditions were optimized using RSM based on full factorial central composite design (CCD). The lipase and protease produced were characterized and used for the hydrolysis of FPW.
2. Materials and methods
Sample collection and preparation
The FPW obtained from a local fish market in refrigerated conditions was cooked until boiling and the hard parts were removed. The cooked FPW was blended in blender and the resulting slurry was stored at −20 °C until use. The sample was prepared in bulk quantity and stored in deep freezer (at −20 °C) as a stock and used for our entire study. Hence, the stability was maintained throughout the same. The lipid portion of FPW was extracted using chloroform and the lipid content was estimated by the procedure followed by Joseph et al.18 The residual sample containing protein was subjected to acetone precipitation at 4 °C, dissolved in distilled water and its protein content was checked using the method followed by Bradford.19
Screening and isolation of lipolytic and proteolytic organisms
The organism that produces alkaline lipase and protease, Streptomyces thermolineatus was isolated from oil contaminated soil of Chennai petroleum corporation limited (CPCL), Chennai using starch casein broth containing (g l−1) starch, 10; casein powder, 1.0; KNO3, 2.0; NaCl, 2.0; K2HPO4, 0.02; and CaCO3, 0.01. The organisms that showed the zone of clearance on both tributyrin agar and skim milk agar plates were acclimatized to degrade fish processing waste. Tributyrin in tributryin agar is a triglyceride, composed of butyric acid and glycerol. The organism producing lipase cleaves the tributyrin and forms halos around the colony forming clear zones. Skim milk agar is used to demonstrate the proteolysis by cleaving casein. The tributyrin and skim milk agar are the selective media for the isolation of lipase and protease producing strains. Out of 31 isolates, the Streptomyces thermolineatus showed a better degradation of lipid18 and protein19 in FPW as well as produced maximum amount of lipase and protease and hence, it was chosen for the further study. The quantitative activity of lipase was determined by titrimetry method using olive oil emulsion as the substrate as described in Ramani et al., 2013.5 Five ml of olive oil emulsion, 2 ml of 0.03% Triton X-100, 1 ml of 3 M NaCl, 2 ml of 0.075% CaCl2 and 4 ml of phosphate buffer (pH 8.0) was added to 1 ml of the enzyme solution. The enzyme–substrate mixture was incubated at 45 °C for 15 min and the reaction was terminated by adding ethanol
:
acetone (1
:
1, v/v) to the mixture. The liberated fatty acids were titrated against 0.02 N NaOH, using phenolphthalein as an indicator with the appearance of pale pink color is the end point. The quantity of fatty acids liberated is calculated based on the equivalents of NaOH used to reach the titration end point. The blank experiment was performed following the same procedure without the enzyme addition. One unit of lipase activity was defined as the amount of enzyme that released 1 μM of fatty acid per min under assay conditions.
The quantitative assay of protease was determined using casein as the substrate with slight modification in the method followed by Anson, 1938.20 Five hundred microlitre of enzyme solution was added to 0.5 ml of 1% (w/v) substrate solution (casein) with 50 mM citrate phosphate buffer, (pH 8) and incubated for 30 min at 45 °C and the reaction was stopped by adding 1 ml of 10% trichloro acetic acid (TCA). The TCA added to enzyme–casein mixture without incubation served as the blank. Both the blank and test solutions were centrifuged at 10
000 rpm for 10 min. To 0.4 ml of supernatant, 1.0 ml of 50 mM Na2CO3 and 0.2 ml of Folin–Ciocalteau reagent were added, and the reaction mixture was incubated at room temperature for 30 min and the absorbance was measured at 660 nm. One unit (U) of proteolytic enzyme activity was defined as the amount of enzyme that liberated 1 μg tyrosine per ml per minute from casein under specified assay conditions and the amount of tyrosine liberated was determined from the tyrosine standard curve.
The organism was maintained on starch casein agar slants at 4 °C and sub-cultured every 15 days. The selected organism was then characterized by morphological analysis, staining methods, biochemical tests and 16S rRNA sequencing. The phylogenetic tree was constructed to identify the closely related species.
Optimization of culture conditions by response surface methodology (RSM)
The lipase and protease production by biodegrading FPW were screened by varying the different time points (0–144 h), pH (2.0–10), temperature (10–70 °C), ammonium sulphate concentration (0.5, 1.0, 1.5, 2.0 and 2.5 g l−1 of the mineral salt medium), inoculum concentration (2.5–12.5% (v/v)) and different concentrations of metal ions (g l−1) [K2HPO4 (0.5–2.5), MgSO4 (0.1–0.5), NaCl (0.5–2.5), CaCl2 (0.1–0.5), FeSO4 (0.05–0.25)]. The significant factors were then optimized by RSM.
Response surface methodology (RSM) is a mathematical modelling tool that was employed to study the significant factors such as temperature, pH, incubation time and nitrogen source and also their interaction among them on the lipase and protease production. Central composite design (CCD) in Design Expert software, version 8.0.7.1 (Stat Ease Inc. Minneapolis, USA, trial version) was employed to design the experiment and to analyse the interaction of significant factors on multiple enzyme production. The above mentioned independent variables were studied at three different levels and a series of experiments (n = 30) were carried out. The model equation used for the analysis was given below:
where
Y is the predicted response,
k is the number of factors,
α0 is the design factor of interest,
αi and
αij are coefficients. The significance of the model was analyzed statistically using
F-test of ANOVA and the coefficient of determination to measure the goodness of fit. The
R2 value determines the accuracy and quality of the above polynomial model. The model was validated by performing the experiment for three times using the optimized conditions obtained from RSM.
Enzymes production
The organism Streptomyces thermolineatus was inoculated in the mineral salt medium containing composition (g l−1) K2HPO4 (1.0); CaCl2 (0.4); MgSO4 (0.2); NaCl (0.5); FeSO4·7H2O (0.2); fructose (0.5); (NH4)2 SO4 (2.0) and FPW (150) at pH 8 and incubated for 96 h and 120 h for protease and lipase extraction respectively. The cell free culture supernatant obtained by centrifugation at 6500 rpm for 20 min at 4 °C was assayed for lipase and protease activity. All experiments were done in triplicates.
Characterization of substrates and fermented products
CHN analysis. The composition of carbon, hydrogen and nitrogen content of the FPW was analyzed using Perkin-Elmer Series II 2400 CHNS/O Elemental Analyser. Required quantity of (2–5 mg) of FPW was combusted at 1500 °C under argon atmosphere and the elements were detected by the detector.
Determination of fatty acid composition by gas chromatography and mass spectrophotometry (GC-MS)
The composition of fatty acid present in initial and fermented FPW was determined by preparing methyl esters according to the methodology followed in Ichihara and Fukubayashi, 2010.21 The fatty acid methyl esters (FAME) were then identified using gas chromatography coupled to mass spectroscopy (GC-MS) model (Agilent technologies, USA, 7890B GC system connected to 5977A MSD) which is equipped with HP_5MS 5% phenyl methyl silox column with dimensions 30 m × 250 μm × 0.25 μm. Helium was used as carrier gas with a flow rate of 1 ml min−1, in a split ratio of 100
:
1. The analysis was carried out using 60 °C for 2 min, 10 °C min−1 to 200 °C, 5 °C min−1 to 240 °C and held at 240 °C for 8 min. The temperature of the injector and detector were set at 250 and 260 °C respectively. The obtained MS spectra were compared with the reference spectra present in the NIST.Lib.
Determination of amino acid composition by HPLC
The amino acid composition present in initial and fermented FPW was analyzed by HPLC. The samples were hydrolyzed using 6 N HCL at 100 °C for 24 h and neutralized to pH 7 with 10 N NaOH. The samples were then analyzed using Agilent 1100 HPLC amino acid analyzer.5
Enzymes purification
For enzymes purification, the cell free supernatant obtained was subjected to gradient ammonium sulphate precipitation from 20–80% (w/v) with the increase of 20% (w/v) each time. The ammonium sulphate was added to the supernatant to a saturation of 20% (w/v) and incubated for 2 h and centrifuged at 12
000 rpm for 15 min at 4 °C and same procedure was repeated for 40, 60 and 80% (w/v) saturation. The precipitate collected was resuspended in 50 mM phosphate buffer (pH 8.0) and it was dialysed against the same buffer at 4 °C. The dialysate was loaded onto a pre-equilibriated Sephadex G-100 column, set at a flow rate of 0.5 ml min−1 using phosphate buffer (pH 8.0) and the fractions were collected. The quantitative activity of lipase and protease were determined after ammonium sulphate precipitation, dialysis and gel filtration column chromatography. The fractions containing the lipase and protease were pooled separately, lyophilised and subjected to SDS-PAGE for molecular weight determination and homogeneity. The amino acid composition of purified lipase and protease were analyzed by HPLC as described earlier.5
Determination of optimum reaction conditions
Effect of pH and temperature on the activity and stability of purified enzymes. The optimum pH for the purified lipase and protease were studied at different pH ranging from 3 to 9 in the following buffers: 100 mM acetate buffer (pH 3.0–5.0), 100 mM phosphate buffer (6.0–8.0), 100 mM tris buffer (pH 9.0–10.0) using olive oil and casein as substrate for lipase and protease respectively under standard assay conditions. The stability of the purified lipase and protease were studied by incubating the purified enzymes in different buffers of varying pH ranging from 3.0 to 10.0 for 1 h at 37 °C and the activity of lipase and protease were measured under standard assay conditions.The optimum temperature for the purified lipase and protease were determined by incubating the enzyme at varying temperatures ranging from 30 to 90 °C at optimized pH 8. The thermal stability was studied by incubating lipase and protease at various temperatures (30 to 90 °C) for 1 h and the activity of lipase and protease were measured under standard assay conditions.
Effect of solvents, metal ions, detergents, reducing agents and inhibitors. The effect of polar solvents (methanol, ethanol, isopropanol, acetone and acetonitrile) and non polar solvents (pentane, toluene, hexane, benzene and octane) on the purified lipase and protease were carried out by incubating the purified enzymes with different solvents for 1 h at 45 °C. The stimulatory or inhibitory effects of metal ions on the enzymes were studied by incubating 1 mM concentration of CuSO4, MgCl2, ZnCl2, KCl, CaCl2, FeSO4 and MnCl2 with the buffered (pH 8.0) enzymes for 1 h at 45 °C and the activity of the lipase and protease were recorded.The detergents like SDS, Triton X-100, Tween 20 and Tween 80 of concentration 0.1% were incubated with the buffered (pH 8.0) enzyme for 1 h at 45 °C. The buffered (pH 8.0) lipase and protease were also incubated with the reducing agents such as β-mercaptoethanol and dithiothritol and inhibitor like PMSF for 1 h at 45 °C. After the incubation time, the activity of the lipase and protease were determined.
Amino acid sequence analysis with liquid chromatography and mass spectrophotometry/mass spectrophotometry (LC-MS/MS)
The amino acid sequence of the purified lipase and protease was determined by LC-MS/MS LC (Shimadzu UFLC, Japan) MS/MS (Bruker, Germany, impact HD MS/MS TOF). Samples of purified lipase and protease were prepared according to the protocol described by Shevchenko et al.22 with slight modification. Briefly, 5 μg of purified lipase and protease were run in SDS-PAGE and the protein bands were excised into cubes (1 × 1 mm) using a clean scalpel. The excised bands were washed with milliQ water. After washing, 500 μl of 50 mM ammonium bicarbonate
:
acetonitrile (1
:
1, v/v) was added and incubated for 15 min and repeated the step twice. Then, 500 μl of acetonitrile was added and incubated at room temperature for 15 min and repeated the step twice. The gel pieces were saturated with 50 μl of 12 ng of trypsin in ammonium bicarbonate buffer and incubated overnight for enzymatic digestion of proteins. Added 50 μl of extraction buffer containing 5% formic acid in acetonitrile to each tube and incubated for 15 min at 37 °C under shaking. The supernatant was collected and dried in vacuum centrifuge and stored at −20 °C until use. For further LC-MS/MS analysis, 20 μl of 0.1% (v/v) trifluoro acetic acid was added, vortexed and centrifuged. The digested peptides were analysed by LC-MS/MS with the column zorbax eclipse plus C18 (4.6 × 100 mm × 3.5 μm). Two microlitre of the sample was injected to the column through autosampler (SIL20ACHT) with the flow rate of 0.4 ml min−1. The column was equilibriated with water and 0.1% formic acid and a linear gradient was performed for 30 min to reach 70% acetonitrile and it remained the same for another 5 min and brought back to 2% acetonitrile with the total run time of 45 min. The obtained mass spectra were analysed by data analysis software and data were compared with Swissprot database through Mascot search engine.
Fourier transform-infrared spectroscopy (FT-IR) of purified enzymes
The functional groups present in the purified lipase and protease were identified using a Perkin Elmer FT-IR spectrophotometer and the spectrum was analyzed in the spectral range of 400–4000 cm−1.
Substrate specificity of purified lipase and protease
The substrate specificity of purified lipase was determined according to the procedure followed by Gururaj et al.27 with the following substrates: p-nitrophenyl alkanoate esters of varying carbon chain length like p-NP acetate (C2), p-NP butyrate (C4), p-NP decanoate (C10), p-NP myristate (C14), and p-NP palmitate (C16). The substrate specificity of purified protease was tested using casein, bovine serum albumin, gelatin and azocasein at pH 8.0 and temperature 45 °C.
Determination of kinetic parameters
The enzyme kinetic parameters like maximum velocity (Vmax) and Michaelis–Menten constant (Km) for the purified lipase and protease were studied using the different concentration of olive oil emulsion and casein (1–10%) at pH 8.0 and temperature 45 °C. The Lineweaver–Burk equation plot (eqn (1)) was used to determine the kinetic parameters.| |
 | (1) |
where [S] is the substrate concentration (mM) and V is the initial reaction rate of the enzyme (mM min−1).
Kinetic studies on the hydrolysis of FPW using the purified enzymes
In order to determine the efficiency of the purified lipase and protease on the hydrolysis of FPW, a series of batch experiments were performed by varying the incubation time (1–24 h), pH (3.0–9.0) and temperature (30–65 °C). The experiments were performed in a 100 ml conical flask by adding 1 g of FPW into 15 ml of 50 mM phosphate buffer (pH 8) containing 1000 U of purified lipase and protease each and incubated at 45 °C for the hydrolysis of FPW. The residual lipid and protein content in the sample were then analyzed. The % hydrolysis of FPW was calculated by
3. Results and discussion
Isolation and identification of lipolytic and proteolytic microorganism
The oil contaminated soil samples are rich in organisms that are capable of producing lipase and protease. Amongst 31 organisms isolated, one organism showed clear zones on both tributyrin and skim milk agar suggesting that the organism was capable of producing both lipase and protease and it also indicated that the produced enzymes are extracellular. Upon staining, the organism was found to be rod shaped and Gram positive. The organism grows well at 45 °C and pH 8.0. The biochemical characterization (data not shown) and 16S rRNA sequencing followed by the BLAST revealed that the isolate was Streptomyces thermolineatus (Fig. 1). The NCBI Gene bank assigned an accession number for the submitted sequence and is KT757685. The blast result showed that it is closely related to S. thermolineatus (accession no. NR0112442.1).
 |
| | Fig. 1 Phylogenetic tree showing the relationship of S. thermolineatus with other Streptomyces sp. | |
Optimization of culture conditions using response surface methodology (RSM)
The growth rate of S. thermolineatus was satisfactory using FPW as substrate indicating that the FPW catered the needs of the organism for its growth. The production of protease and lipase began after 24 and 48 h of incubation respectively when the organism was in the exponential phase and the enzyme production reached their maximum during the stationary phase.23 In order to examine the factors that influence the growth and the enzyme production, RSM was used. After the preliminary experiments, RSM using the full factorial CCD method was employed to study the interactions of four significant factors (incubation time, temperature, pH and nitrogen source) that had great impact on lipase and protease production. Table 1 shows the high and low levels with the coded levels for the various significant factors. The software generated 30 different experiments using different combinations of four factors such as temperature, pH, time and nitrogen concentration. After the experiments were conducted, the results were fed to the software, analyzed the results and were depicted in Tables 2 and 3 for lipase and protease respectively. The regression analysis shown on Table 4 depicts the effects of the significant factors on the lipase and protease activity and were predicted by the second order polynomial function as
| Lipase activity (U ml−1) = +389.6 − 9.5 × A − 2.17 × B − 9.0 × C − 2.3 × D − 3.00 × A × B + 4.00 × A × C + 6.25 × A × D + 5.0 × B × C + 4.75 × B × D + 2.75 × C × D − 28.46 × A2 − 51.46 × B2 − 67.21 × C2 − 50.96 × D2 |
| Protease activity (U ml−1) = +868.67 − 5.50 × A − 17.83 × B − 6.50 × C + 3.33 × D + 9.25 × A × B − 30.00 × A × C + 21.2 × A × D − 10.75 × B × C + 6.50 × B × D − 1.75 × C × D − 77.29 × A2 − 62.04 × B2 − 74.29 × C2 − 58.79 × D2 |
where A, B, C and D correspond to incubation time, pH, temperature and nitrogen source respectively.
Table 1 High and low levels of significant factors with coded levels
| Factor |
Name |
Lipase |
Protease |
| Low level |
High level |
Low level |
High level |
| A |
Incubation time (h) |
96 |
144 |
72 |
120 |
| B |
pH |
7 |
9 |
7 |
9 |
| C |
Temperature (°C) |
40 |
50 |
40 |
50 |
| D |
Ammonium sulphate concentration (g l−1) |
1 |
3 |
1 |
3 |
Table 2 Experimental design for RSM with four independent variables showing the observed and predicted values of lipase production
| Run |
A (incubation time, h) |
B (pH) |
C (temperature °C) |
D (nitrogen source g l−1) |
Mean observed response (U ml−1) |
Predicted response (U ml−1) |
| 1 |
144 |
9 |
50 |
1 |
170 |
165.5 |
| 2 |
72 |
8 |
45 |
2 |
300 |
294 |
| 3 |
144 |
9 |
40 |
3 |
190 |
192.8 |
| 4 |
120 |
8 |
45 |
2 |
390 |
389.6 |
| 5 |
96 |
7 |
50 |
3 |
160 |
191.6 |
| 6 |
120 |
6 |
45 |
2 |
196 |
188.1 |
| 7 |
120 |
8 |
45 |
2 |
390 |
389.6 |
| 8 |
144 |
7 |
40 |
1 |
190 |
200.8 |
| 9 |
96 |
9 |
50 |
1 |
186 |
195 |
| 10 |
144 |
9 |
50 |
3 |
172 |
188.3 |
| 11 |
144 |
7 |
50 |
1 |
168 |
175.3 |
| 12 |
120 |
8 |
45 |
0 |
200 |
195.5 |
| 13 |
96 |
7 |
40 |
1 |
240 |
234.3 |
| 14 |
120 |
8 |
45 |
2 |
386 |
389.6 |
| 15 |
144 |
7 |
40 |
3 |
192 |
193.6 |
| 16 |
120 |
8 |
45 |
2 |
402 |
389.6 |
| 17 |
96 |
9 |
40 |
3 |
200 |
203.3 |
| 18 |
96 |
9 |
50 |
3 |
206 |
192.8 |
| 19 |
144 |
9 |
40 |
1 |
172 |
171 |
| 20 |
96 |
7 |
40 |
3 |
200 |
202.1 |
| 21 |
96 |
7 |
50 |
1 |
188 |
192.8 |
| 22 |
144 |
7 |
50 |
3 |
188 |
179.1 |
| 23 |
168 |
8 |
45 |
2 |
260 |
256.8 |
| 24 |
120 |
8 |
55 |
2 |
110 |
102.8 |
| 25 |
120 |
8 |
45 |
2 |
386 |
389.6 |
| 26 |
120 |
8 |
35 |
2 |
140 |
138.3 |
| 27 |
120 |
8 |
45 |
2 |
384 |
389.6 |
| 28 |
120 |
8 |
45 |
4 |
180 |
181.1 |
| 29 |
120 |
10 |
45 |
2 |
180 |
199.5 |
| 30 |
96 |
9 |
40 |
1 |
210 |
216.5 |
Table 3 Experimental design for RSM with four independent variables showing the observed and predicted values of protease production
| Run |
A (incubation time, h) |
B (pH) |
C (temperature °C) |
D (nitrogen source g l−1) |
Mean observed response (U ml−1) |
Predicted response (U ml−1) |
| 1 |
96 |
6 |
45 |
2 |
656 |
656.1 |
| 2 |
72 |
9 |
40 |
3 |
576 |
552.2 |
| 3 |
72 |
9 |
50 |
1 |
616 |
600.5 |
| 4 |
96 |
8 |
45 |
2 |
816 |
868.6 |
| 5 |
72 |
7 |
50 |
1 |
680 |
689.2 |
| 6 |
96 |
8 |
55 |
2 |
540 |
558.5 |
| 7 |
120 |
7 |
50 |
1 |
544 |
557.2 |
| 8 |
144 |
8 |
45 |
2 |
540 |
548.5 |
| 9 |
72 |
9 |
50 |
3 |
580 |
574.2 |
| 10 |
96 |
10 |
45 |
2 |
554 |
584.8 |
| 11 |
96 |
8 |
35 |
2 |
572 |
584.5 |
| 12 |
96 |
8 |
45 |
2 |
896 |
868.6 |
| 13 |
96 |
8 |
45 |
2 |
864 |
868.6 |
| 14 |
96 |
8 |
45 |
2 |
880 |
868.6 |
| 15 |
96 |
8 |
45 |
2 |
868 |
868.6 |
| 16 |
120 |
7 |
40 |
3 |
640 |
644.9 |
| 17 |
96 |
8 |
45 |
4 |
616 |
640.1 |
| 18 |
120 |
9 |
50 |
3 |
560 |
564.2 |
| 19 |
96 |
8 |
45 |
2 |
888 |
868.6 |
| 20 |
72 |
9 |
40 |
1 |
580 |
571.5 |
| 21 |
48 |
8 |
45 |
2 |
548 |
570.5 |
| 22 |
120 |
7 |
40 |
1 |
620 |
605.2 |
| 23 |
120 |
9 |
50 |
1 |
538 |
505.5 |
| 24 |
120 |
9 |
40 |
3 |
578 |
596.5 |
| 25 |
96 |
8 |
45 |
0 |
620 |
626.8 |
| 26 |
72 |
7 |
50 |
3 |
666 |
636.9 |
| 27 |
120 |
9 |
40 |
3 |
692 |
662.1 |
| 28 |
72 |
7 |
40 |
1 |
632 |
617.2 |
| 29 |
120 |
7 |
50 |
3 |
602 |
589.9 |
| 30 |
72 |
7 |
40 |
3 |
560 |
571.9 |
Table 4 ANOVA for the second-order polynomial model for the lipase and protease production
| Source |
Degree of freedom |
Mean square |
F value |
P value prob > F |
| Lipase |
| Model |
14 |
15 582.12 |
153.38 |
<0.0001 (significant) |
| Residual |
15 |
101.59 |
|
|
| Lack of fit |
10 |
133.63 |
3.56 |
0.0867 (non-significant) |
| Pure error |
5 |
37.5 |
|
|
| Total |
29 |
|
|
|
| R2 |
|
|
|
0.9931 |
![[thin space (1/6-em)]](https://www.rsc.org/images/entities/char_2009.gif) |
| Protease |
| Model |
14 |
27 578.59 |
31.15 |
<0.0001 (significant) |
| Residual |
15 |
885.31 |
|
|
| Lack of fit |
10 |
923.43 |
1.14 |
0.4697 (non-significant) |
| Pure error |
5 |
809.07 |
|
|
| Total |
29 |
|
|
|
| R2 |
|
|
|
0.9667 |
Analysis of variance (ANOVA-partial sum of squares-type III)
The significance of the model for the second order polynomial model was determined by the F and p-values shown in Table 4. The p-value is less than 0.0001 for both lipase and protease and the F-value is 153.3 and 31.15 for lipase and protease respectively. The p values denote the significance of each coefficient which is mandate to infer the interaction between the significant factors. Ordinarily, smaller the p value, greater is the significance of their coefficient.24 The F-value depicts the model adjusted well to the experimental data. The F-value of lack of fit for lipase and protease are 3.56 and 1.14 respectively denotes the pure error is not significant which is the indicative of the goodness of model devised. The Prob > F less than 0.0500 indicate the model is significant. Typically, as the coefficient of variation (CV) value gets lowered, the reliability of the experiment becomes more eminent. CV is a statistical measure that describes the amount of variability relative to the mean. CV value of lipase and protease are 4.35 and 4.55 respectively suggesting a better precision and reliability of experiments.25 The regression coefficient R2 was used to determine the model precision and was calculated to be 0.9931 and 0.9667 for lipase and protease respectively. The regression coefficient shows that the model could explain 99.3 and 96.7% of variability in the responses indicating that the devised model is more accurate and consistent.
Localization of the optimum conditions
The effects of the individual, independent factors and the interaction among them can be studied by the 3D response surface plots that are graphical representations of the regression equation. The optimum level of each factor can also be evaluated from 3D response surface plot based on model regression equation. The 3D response surface plots showed that the lipase and protease were produced in maximum levels at an optimum condition of temperature 45 °C, pH 8, ammonium sulphate concentration 2 g l−1 and time 96 h and 120 h for protease and lipase respectively. Fig. 2a–f showed the effects of interaction of two significant factors while keeping the other factor at zero level. The optimum point for each component can be obtained from the coordinates of the central point within the highest contour levels from each of the Fig. 2a–f.26
 |
| | Fig. 2 Response surface curve for lipase activity (U ml−1) by S. thermolineatus as a function of (a) time (h) and pH, (b) time (h) and temperature (°C) and (c) time and ammonium sulphate (g l−1) and protease activity (U ml−1) as a function of (d) time (h) and pH, (e) time (h) and temperature (°C) and (f) time and ammonium sulphate (g l−1). | |
The activity of lipase and protease were 402 and 897 U ml−1 at the optimized condition of time 120 h for lipase enzyme production, 96 h for protease enzyme production, temperature 45 °C, pH 8.0, ammonium sulphate concentration 2 g l−1, and 1% substrate concentration suggesting that the optimum culture condition is required for the maximum enzyme production.5 The presence of protease did not affected the production or the activity of lipase suggesting that the produced lipase is proteolytic resistant lipase.
Product characterization
The FPW before and after the fermentation was characterized by using C, H and N content, GC-MS and amino acid composition analysis. The total lipid and protein concentration in FPW were 13.19 and 68.8 mg g−1 respectively. The maximum lipid and protein conversion was observed at 120 and 96 hours and pH 8.0, temperature 45 °C. After fermentation at the optimized conditions, the lipid and protein levels were greatly reduced to 2.96 and 16.44 mg g−1 respectively suggesting the effective fermentation of S. thermolineatus. The percentage (w/w) of carbon, hydrogen and nitrogen present in the FPW before and after fermentation were 52.39, 9.53 and 8.82 and 32.2, 5.11 and 7.19 respectively. The CHN result showed there is a considerable decrease in the percentage of carbon, hydrogen and nitrogen after fermentation. This result clearly indicates the conversion of complex biomolecules present in the FPW into simpler units. The GC-MS chromatogram revealed the fatty acid profile with retention time before and after fermentation (Fig. 3a and b). The predominant fatty acids that are present before fermentation are palmitic acid (C17H34O2 – 42%), stearic acid (C19H38O2 – 21%), oleic acid (C19H36O2 – 18%), tetradecanoate (C15H30O2 – 5.1%), palmitoleic acid (C17H32O2 – 4.09%) and arachidic acid (C21H42O2 – 1.12%) with the retention time of 18.082, 20.778, 20.565, 15.730, 17.844 and 23.499 min respectively. The peaks of palmitoleic acid and arachidic acid present before fermentation were absent after fermentation. Also, the peak area of palmitic acid, stearic acid, oleic acid and myristic acid with the retention time of 18.082, 20.653, 20.315 and 15.730 min respectively, were greatly reduced after fermentation confirming the lipid degradation. The composition of amino acid in the initial and fermented FPW was shown in the Table 5. The increase in the amount of free amino acid in the fermented FPW indicates the proteolytic ability of the organism. The S. thermolineatus produces protease and breaks down the complex proteins into peptides and amino acids and utilizes them for their growth and survival. The amino acids such as serine, glutamine, glycine, valine, methionine, leucine, tryptophan are greatly increased after fermentation in the medium.
 |
| | Fig. 3 GC-MS chromatogram of fatty acid (a) initial FPW and (b) fermented FPW using S. thermolineatus. | |
Table 5 Amino acid composition of initial and fermented FPW
| S. no. |
Amino acid |
Initial (%) |
Fermented (%) |
| 1 |
Aspartic acid |
0.563 |
0.613 |
| 2 |
Glutamic acid |
0.113 |
0.205 |
| 3 |
Asparagine |
0.209 |
0.135 |
| 4 |
Serine |
0.436 |
0.831 |
| 5 |
Glutamine |
0.346 |
0.593 |
| 6 |
Glycine |
0.536 |
0.893 |
| 7 |
Alanine |
0.916 |
1.035 |
| 8 |
Tyrosine |
0.332 |
0.356 |
| 9 |
Histidine |
0.593 |
0.693 |
| 10 |
Valine |
0.395 |
1.103 |
| 11 |
Methionine |
0.693 |
0.955 |
| 12 |
Isoleucine |
0.963 |
1.084 |
| 13 |
Phenylalanine |
0.783 |
0.983 |
| 14 |
Leucine |
0.291 |
0.883 |
| 15 |
Lysine |
0.195 |
0.382 |
| 16 |
Proline |
0.559 |
0.778 |
| 17 |
Trytophan |
0.193 |
0.465 |
Purification of enzymes
The extracellular lipase and protease present in 120 h cell free culture supernatant was purified by ammonium sulphate precipitation and gel filtration chromatography. Table 6 depicts the summary of the purification steps showing the specific activity of purified lipase and protease as 904 and 2540 U mg−1 with a yield of 21 and 27% respectively. The purification fold of 8.64 and 10.8 were achieved for lipase and protease respectively. The molecular mass of the purified lipase and protease were determined to be 34 and 23 kDa respectively on SDS-PAGE (Fig. 4). Mander et al.13 reported that the lipase produced from Streptomyces sp. was 37.5 kDa whereas the molecular weight of the protease was comparatively lower than protease isolated from Streptomyces sp. MAB18.23
Table 6 Summary of purification steps of lipase and protease from S. thermolineatus
| Purification steps |
Total activity (U) |
Total protein (mg) |
Specific activity (mg) |
Yield (%) |
Purification fold |
| Lipase |
| Crude lipase |
402 000 |
3844 |
105 |
100 |
1 |
| Ammonium sulphate precipitation |
232 000 |
1865 |
124 |
58 |
1.18 |
| Dialysis |
168 000 |
438 |
384 |
42 |
3.67 |
| Sephadex G-100 |
86 000 |
95 |
904 |
21 |
8.64 |
![[thin space (1/6-em)]](https://www.rsc.org/images/entities/char_2009.gif) |
| Protease |
| Crude protease |
895 833 |
3844 |
233 |
100 |
1 |
| Ammonium sulphate precipitation |
580 833 |
1865 |
311 |
65 |
1.3 |
| Dialysis |
465 833 |
438 |
1064 |
52 |
4.56 |
| Sephadex G-100 |
241 667 |
95 |
2540 |
27 |
10.8 |
 |
| | Fig. 4 SDS-PAGE showing the molecular weight of purified lipase and protease. Lane M molecular weight marker (14.3 to 97.4), lane 1 purified protease (23 kDa), lane 2 purified lipase (34 kDa). | |
Determination of amino acid sequence of purified enzymes by LC-MS/MS analysis
The amino sequence of the purified lipase and protease were determined by LC-MS/MS analysis. The obtained sequence of lipase and protease from Mascot search were compared with Swissprot database for homology search. The purified lipase and protease of S. thermolineatus showed 74 and 60% homology with lipase of Thermomyces langinosus and protease of Streptomyces griseus respectively. To date, there is no sequence data available for the lipase and protease of S. thermolineatus. The possible amino acid sequence of the purified lipase and protease were shown in Fig. 5 and 6 respectively. The molecular mass and isoelectric point (pI) of purified lipase were determined as 32 kDa and 5.36 respectively whereas for protease the molecular mass and pI were found as 29.81 kDa and 5.60 respectively. The amino acid sequencing analysis suggested that the isolated lipase and protease exhibits the characteristic of lipase and protease enzyme family.27 The LC-MS/MS analysis also suggested that the protease produced from S. thermolineatus is an aminopeptidase that cleaves the amino acid from N-terminal side of a protein.28 This result suggests the exopeptidase activity of the protease isolated from S. thermolineatus.
 |
| | Fig. 5 LC-MS/MS analysis and peptide sequence matches of lipase. (a) MS/MS fragmentation of VVFTGHSLGGALATVAGADLR found in LIP_THELA in SwissProt, lipase OS = Thermomyces lanuginosus (b) observed ions of each type are shown in bold and (c) possible sequence of purified lipase. Matched peptides are shown in bold. | |
 |
| | Fig. 6 LC-MS/MS analysis and peptide sequence matches of protease. (a) MS/MS fragmentation of AHLTQLSTIAANNGGNR found in APX_STRGG in SwissProt, aminopeptidase S OS = Streptomyces griseus subsp. griseus (b) observed ions of each type are shown in bold and (c) possible sequence of protease. Matched peptides are shown in bold. | |
Characterization of purified enzymes
Effect of pH and temperature on the purified enzymes activity and stability. The maximum activity of purified alkaline lipase and protease from S. thermolineatus were best at pH 8.0 suggesting the alkaline nature of the enzymes which is preferred for industrial use especially in detergent industry.29,30 Fig. 7a shows the relative activity and stability of purified lipase and protease at different pH. The purified lipase showed above 86% activity in the pH range of 7–9 and it retained very good activity after 1 h confirming its stability at this pH range. At pH 9.5 and 6.5, the residual lipase activity was declined to 31.8 and 56.2% respectively, due to the denaturation of lipase. This result is in agreement with that of lipase produced from Streptomyces coelicolor A(3)2 showing pH stability in the range (6.0–9.0) reported by Cote and Shareck.31 The lipases produced by Streptomyces bambergiensis OC25-4
14 and Streptomyces sp.12 were also found to be active at an optimum pH of 8.0. Though the protease showed its optimum activity at pH 8.0, it exhibited good stability retaining more than 80% of its initial activity in pH range between 6.5 and 9.0. At pH 6 and 9.5, the enzyme retained the residual activity of 75 and 64.8% respectively as reported by other workers.9,32,33 Ghorbel et al.8 also reported that the protease produced from Streptomyces flavogriseus HS1 was highly active between pH 6.0 and 8.0, with optimum pH at 7.0. Our data suggested that the purified alkaline lipase and protease from S. thermolineatus were stable over a broad range of pH and this property is highly desirable for industrial applications.
 |
| | Fig. 7 Relative activity and stability of purified lipase and protease at different (a) pH and (b) temperatures. | |
The activity of the purified lipase and protease were determined by varying temperatures from 30 to 90 °C and is depicted in Fig. 7b. The maximum activity of lipase and protease were observed at 45 °C and 68 and 77% of residual lipase and protease activity respectively were observed at 70 °C. The activity of both enzymes declined beyond 70 °C. The loss of activity above 70 °C could be due to the denaturation of enzyme structure by heat.34 Fig. 7b also showed that the lipase and protease produced by S. thermolineatus are highly stable (100%) at 45 °C and they can withstand temperatures from 30–60 °C retaining more than 85% of their initial activities whereas at 70 °C, purified lipase and protease retained 74 and 47% activity respectively, after 1 h of incubation. These results suggest that the produced lipase and protease can withstand high temperatures which are highly preferable for the industrial purpose. The enzymes that withstand high temperatures are good candidates for biotechnological applications especially in synthetic reactions.35
Effect of organic solvents and metal ions. The use of enzymes for many industrial purposes has gained attention in last few decades. The lipases are employed for the bioconversion in presence of organic solvents and the proteases are used in the peptide and ester synthesis under non-aqueous conditions. So there is a constant search for novel solvent tolerable enzymes to use for industrial applications.13 The stability of purified lipase and protease were tested on various organic solvents such as DMSO, methanol, acetonitrile, ethanol, acetone, isopropanol, benzene, toluene, hexane and octane with varying log
P values from −1.378 to 4.783 at 10% solvent concentration (Table 7). The log
P value is a logarithm of the partition coefficient between water and n-octanol and it provides a measure of differential solubility of the solvent.13 The purified lipase was more stable in the presence of non-polar solvents (log
P value > 2.13–4.783) like benzene, hexane, toluene and octane showing 114–138% of residual activities. The purified lipase was moderately stable in the presence of polar solvents (log
P < −1.378) like DMSO, methanol, ethanol, acetone and isopropanol with the residual activities of 52–93%. The lipase was more stable in non polar solvents than polar solvents. The polar solvents clear off the water molecule from the enzyme's active site attributing to lesser activity whereas the non polar solvents being immiscible with enzyme render it work at the interphase thereby enhancing the enzyme's activity.13
Table 7 Effect of organic solvents and metal ions on purified lipase and protease activity
| Organic solvents (10%) |
log P value |
Relative lipase activity (%) |
Relative protease activity (%) |
Metal ions (1 mM) |
Relative lipase activity (%) |
Relative protease activity (%) |
| Control |
|
100 |
100 |
Control |
100 |
100 |
| DMSO |
−1.378 |
97 |
93 |
Cu2+ |
71 |
87 |
| Methanol |
−0.764 |
77 |
80 |
Mg2+ |
113 |
96 |
| Acetonitrile |
−0.394 |
15 |
37 |
Zn2+ |
53 |
69 |
| Ethanol |
−0.235 |
60 |
74 |
Mn2+ |
35 |
92 |
| Acetone |
−0.208 |
43 |
52 |
Fe2+ |
93 |
95 |
| Isopropanol |
0.074 |
49 |
60 |
K+ |
98 |
94 |
| Benzene |
2.13 |
119 |
24 |
Ca2+ |
96 |
123 |
| Toulene |
2.46 |
114 |
30 |
EDTA |
33 |
63 |
| Hexane |
3.764 |
138 |
86 |
|
|
|
| Octane |
4.783 |
115 |
94 |
|
|
|
The purified protease was quiet stable in both polar and non-polar solvents of which DMSO showed maximum relative activity of 93%. DMSO enhanced the protease activity of Streptomyces sp.11 Benzene and toluene inhibited the protease activity retaining 24 and 30% respectively of its initial activity. This is in contrast with the results reported by Sangeetha et al.15 and Doddapaneni et al.36 Acetonitrile inhibited both lipase and protease retaining the residual activity of 15 and 37% respectively after 1 h of incubation whereas acetone moderately inhibited both enzymes with the residual activity of 43 and 52% for lipase and protease respectively. Acetonitrile found to strongly inhibit the lipase of Streptomyces sp. CS268
13 and Pseudomonas otitidis.5 The above results showed that the purified lipase and protease from S. thermolineatus are stable in both polar and non-polar solvents. This property is highly applicable in various industrial applications which are processed with the polar and non-polar solvents particularly in pharmaceutical and food processing industries for flavour synthesis.37
Many enzymes require metal ions for their activity and certain enzymes use metal ions as a cofactor. In this study, the effect of various metal ions such as Cu2+, Mg2+, Zn2+, Mn2+, Fe2+, K+, Ca2+ and EDTA at a concentration of 1 mM was studied on the activity of purified lipase and protease and the results were tabulated in Table 7. The activity of lipase was enhanced by Mg2+ to 113% whereas Cu2+, Zn2+, Mn2+ and EDTA inhibited the lipase and it retained 71, 53, 35 and 33% respectively of its original activity. Similar results has been reported by Ayaz et al.12 in which it was observed that lipase from Streptomyces sp. OC119-7 showed stimulatory effect by Mg2+ and inhibitory effect by Zn2+ and Mn2+. The Fe2+, K+ and Ca2+ had least effect on the lipase activity. The calcium ion stimulated the activity of protease by 123%. Apart from Ca2+, other metal ions had least effect on purified protease except for Zn2+ and EDTA that inhibited the protease activity by 31 and 37% respectively. The Ca2+ enhances the activity of protease produced from Lactobacillus brevis, Anthrobacter sp., Corynebacterium sp. and Bacillus subtilis.38,39 The inhibitory effect of EDTA was observed on both purified lipase and protease suggesting that the enzymes from S. thermolineatus are metal dependent.15
Effect of detergents, inhibitors and reducing agents. In the last few decades, the usage of enzymes in the detergent industries is common and hence the need for enzymes compatible with detergent formulation is a common requisite. The effect of surfactants such as SDS, Triton X-100, Tween 20 and Tween 80 on the activity of purified lipase and protease were tabulated in Table 8. The activity of lipase and protease were unaffected by the non-ionic detergent Triton X-100. Tween 20 inhibited lipase activity by 50% whereas SDS and Tween 80 moderately inhibited it retaining the residual lipase activities of 71 and 73% respectively. Mander et al.13 reported that lipase produced from Streptomyces sp. CS268 was inhibited by Tween 20, Tween 80 and SDS but the Triton X-100 enhanced the lipase activity. The protease remains unaffected by the surfactant tested except for Tween 20 which moderately inhibited the activity by 21%. Tween 20, Tween 80 and Triton X-100 had little influence on the protease from Streptomyces flavogriseus HS1 whereas SDS strongly inhibited it retaining only 19% of protease activity.8 The above results demonstrated that the presence of surfactant did not have much impact on the produced lipase and protease activity suggesting their applicability in industries.
Table 8 Effect of detergents, inhibitors and reducing agents on purified lipase and protease activitya
| Detergents (0.1%) |
Relative lipase activity (%) |
Relative protease activity (%) |
Inhibitors & reducing agents (1 mM) |
Relative lipase activity (%) |
Relative protease activity (%) |
| The enzyme activity of the control was taken as 100%. SDS-sodium dodecyl sulphate, DTT – dithiothreitol. |
| Control |
100 |
100 |
Control |
100 |
100 |
| SDS |
71 |
99 |
PMSF |
96 |
29 |
| Triton X-100 |
97 |
96 |
β-Mercaptoethanol |
75 |
80 |
| Tween-20 |
50 |
79 |
DTT |
82 |
88 |
| Tween-80 |
73 |
92 |
|
|
|
The purified lipase and protease were incubated with 1 mM PMSF, beta mercaptoethanol and dithiothritol for 1 h at 45 °C and their effect on enzyme activity has been tabulated in Table 8. The lipase remains unaffected by PMSF whereas residual activity of protease was greatly reduced to 29% suggesting that protease produced by S. thermolineatus is a serine protease.40 The reducing agent like β-mercaptoethanol and dithiothritol showed moderate inhibition on the activity of both lipase and protease suggesting the need for the disulphide bridges for the enzyme's activity.5 The disulphide bridges in the enzymes helps in the stabilization of the enzyme structure thereby establishing the function of the enzymes.
Amino acid composition of purified lipase and protease
The amino acid composition of purified lipase and protease from S. thermolineatus were determined using HPLC (Table 9). It was found that the purified lipase contained 30.81% of polar amino acid and 69.18% of non-polar amino acid whereas the protease had 42.7 and 57.2% of polar and non-polar amino acids respectively. The ratio of polar/non-polar amino acid of lipase and protease was found as 0.44 and 0.74 respectively. The presence of high percentage of non-polar amino acids present in the lipase attributes to the hydrophobicity of the lipase.
Table 9 Amino acid composition of purified lipase and protease
| Amino acids in lipase |
Mol (%) |
Amino acids in protease |
Mol (%) |
| Polar amino acids |
| Aspartic acid |
4.14 |
Aspartic acid |
4.15 |
| Glutamic acid |
11.14 |
Glutamic acid |
2.24 |
| Serine |
Traces |
Serine |
Traces |
| Glutamine |
4.08 |
Glutamine |
1.84 |
| Threonine |
2.41 |
Threonine |
2.48 |
| Arginine |
6.75 |
Arginine |
3.86 |
| Lysine |
2.74 |
Lysine |
2.36 |
| Tyrosine |
9.08 |
Tyrosine |
10.01 |
| Histidine |
2.36 |
Histidine |
3.83 |
![[thin space (1/6-em)]](https://www.rsc.org/images/entities/char_2009.gif) |
| Non-polar amino acids |
| Glycine |
2.49 |
Glycine |
2.04 |
| Valine |
2.47 |
Valine |
6.04 |
| methionine |
6.75 |
Methionine |
10.83 |
| Isoleucine |
11.39 |
Isoleucine |
16.58 |
| Leucine |
10.18 |
Leucine |
11.8 |
| Alanine |
7.62 |
Alanine |
4.03 |
| Proline |
1.52 |
Proline |
10.7 |
| Cysteine |
11 |
Cysteine |
2.36 |
| Phenylalanine |
2.79 |
Phenylalanine |
2.36 |
| Trptophan |
1.01 |
Trptophan |
2.36 |
Functional groups of purified lipase and protease
The FT-IR spectra reveal the major functional groups present in the purified lipase and protease and is shown in the Fig. 8a and b. The spectral region from 1300 to 1800 cm−1 represents the peaks corresponding to the peptide group vibration. The peaks at 1427.92 cm−1, 1643.661 cm−1 and 1449.97 cm−1, 1648.5 cm−1 in the spectra of purified lipase and protease respectively, can be attributed to the C–N stretching vibrations of amide and C
O stretching vibrations of amide I of enzymes.41 The broad band at 3426.98 cm−1 and 3429.46 cm−1 in the spectra of lipase and protease respectively, could be attributed to secondary amine and peptide bond.42
 |
| | Fig. 8 FT-IR spectra of purified (a) lipase and (b) protease from S. thermolineatus. | |
Substrate specificity of purified lipase and protease
The purified lipase showed more specificity towards long and intermediate carbon length of p-nitrophenyl esters than the short carbon chain fatty acid (Table 10). The specific activity towards the C16 substrate was about 4.5 fold higher than that of C4 carbon chain length. The specificity of purified protease towards various substrates like casein, bovine serum albumin, gelatin and azocasein was evaluated. The protease exhibited highest specificity for casein (610 U ml−1), followed by BSA (530.83 U ml−1), azocasein (436.67 U ml−1) and gelatin (304.16 U ml−1) (Table 10). This suggests that the protease showed specificity for a wide range of substrates. The specificity towards a range of substrate shows that the protease produced from S. thermolineatus could be used for the hydrolysis of large polypeptides and complex proteins.43
Table 10 Substrate specificity of purified lipase and protease
| Substrate |
Enzyme activity (U ml−1) |
| Substrate specificity of lipase (U ml−1) |
| p-Nitrophenyl acetate (C2) |
50 |
| p-Nitrophenyl butyrate (C4) |
66.99 |
| p-Nitrophenyl decanoate (C10) |
118.91 |
| p-Nitrophenyl myristate (C14) |
124.34 |
| p-Nitrophenyl palmitate (C16) |
223.11 |
![[thin space (1/6-em)]](https://www.rsc.org/images/entities/char_2009.gif) |
| Substrate specificity of protease (U ml−1) |
| BSA |
530.833 |
| Casein |
610 |
| Azocasein |
436.67 |
| Gelatin |
304.166 |
Determination of enzyme kinetic parameters
The Michaelis Menten constant (Km) and maximum velocity (Vmax) of the purified lipase and protease using olive oil and casein respectively were determined by Lineweaver–Burk plot (Fig. 9a and b). The Km and Vmax of purified lipase were 2.25 mM and 149.54 mM min−1 respectively, which was 30 times higher than the Vmax of lipase from Streptomyces sp. CS326.44 The Km and Vmax of purified protease were 5.6 mM and 32.38 mM min−1 respectively. The Km represents the enzyme's affinity towards the substrate while Vmax denotes the catalytic efficiency. The lower the Km greater is the affinity of the enzyme towards the substrate which in turn show better hydrolysis of substrate. This hydrolytic property can be used to hydrolyse the lipids and proteins present in FPW.5,45
 |
| | Fig. 9 Lineweaver–Burk plot of (a) purified lipase using olive oil and (b) purified protease using casein as substrate. | |
Kinetic studies on the hydrolysis of FPW
The microorganism produces enzymes to utilize the available substrate present in the surrounding environment. The lipase produced by the organism cleaves esters of glycerol into glycerol and fatty acid by cleaving at ester bonds whereas the protease converts the polypeptides and peptides into amino acids by breaking the amide linkages between the two amino acids.46 In order to determine the efficiency of the purified lipase and protease in the hydrolysis of lipid and protein of FPW, the following hydrolysis kinetic studies were carried out.
Effect of time, pH and temperature on FPW hydrolysis using purified lipase and protease
The FPW substrate was allowed to react with the buffered (pH 7.0) purified lipase and protease. The batch hydrolysis of FPW with respect to time, pH and temperature is shown in Fig. 10a–c respectively. The maximum percentage conversion of lipid and protein in FPW are 60 and 65.5% respectively. The time taken for the maximum conversion for lipase and protease is 8 h and 5 h respectively beyond which the reaction reached saturation and there was no further conversion seen (Fig. 10a). Thus, the optimum time for the hydrolysis of FPW was chosen as 8 h for further study.
 |
| | Fig. 10 Enzymatic hydrolysis of FPW: effect of (a) time (conditions: FPW 66.7 g l−1, pH 7.0 and temperature 35 °C) (b) pH (conditions: FPW 66.7 g l−1, incubation time 8 h, temperature 35 °C) and (c) temperature (conditions: FPW 66.7 g l−1, pH 8.0 and incubation time 8 h). | |
The determination of optimum pH for the hydrolysis of FPW was carried out at 45 °C using various pH buffers ranging from 3.0 to 10.0 that were prepared, using acetate, phosphate and tris buffers. The results in Fig. 10b showed that the optimum pH for maximum conversion of FPW was pH 8.0 for both the enzymes and the percentage conversion of lipid and protein in FPW was 67 and 76.8%. The conversion of lipid and protein was decreased when the pH value was set above or below 8.0. Since the optimum pH of the purified lipase and protease activity was pH 8.0, the enzymes were highly active in converting the FPW and thus attained maximum hydrolysis of FPW at pH 8.0.
The hydrolysis of FPW using purified lipase and protease at different temperatures (30–65 °C) was carried out and the results are shown in Fig. 10c. The maximum percentage of hydrolysis of lipid and protein were 76 and 86% respectively at 45 °C.
Identification of hydrolysed products using FT-IR
The FT-IR spectrum of the unhydrolysed and the hydrolysed FPW using the purified lipase and protease produced from S. thermolineatus using FPW is shown in the Fig. 11a and b respectively. The unhydrolysed FPW spectrum (Fig. 11a) shows the N–H stretching vibration of protein at 3433.44 cm−1. The N–H bending vibration of primary amines of the protein was observed at 1651.16 cm−1. The C–N stretching vibration of protein can be viewed at 1239.14 cm−1. The peak at 1746.19 cm−1 can be attributed to the C
O stretching of ester group present in lipid. The peak at 1464.36 cm−1 can be attributed to the –CH2 scissoring vibration.
 |
| | Fig. 11 FT-IR spectra of (a) unhydrolysed FPW and (b) hydrolysed FPW using purified enzymes produced from S. thermolineatus using FPW. | |
The FT-IR spectrum of hydrolysed FPW (Fig. 11b) showed that the proteins present in the FPW was hydrolysed into amino acids. This was confirmed by the presence of peaks at 1642.86 and 875 cm−1 that attributed to N–H bending of the amino acid and the deformed structure of the aromatic ring of degraded protein respectively. The disappearance of peak at 1746.19 cm−1 in the hydrolysed FPW spectrum indicated the major conversion of triacylglycerides into fatty acids and glycerol. This conversion could be further confirmed by the peaks present at 1550.25 and 1403.09 cm−1 that corresponds to carboxylate ion formation. The peaks at 1550.25 and 1403.09 cm−1 denotes a strong asymmetrical and weaker asymmetrical C
O stretching vibrations respectively, of carboxylic acid present in the fatty acid.
4. Conclusions
FPW is utilized to synthesize high value-added products like lipase and protease concomitantly by S. thermolineatus. Waste utilization for enzyme production enables reduction of waste, environmental pollution and disposal cost. The devised fitted model ensured optimal growth requirements for the maximal production of enzymes using single fermentation system. Enzyme's stability over a broad range of temperatures, pH, organic solvents and reducing agents is conducive with industrial applications. Enzymatic FPW hydrolysis revealed that multiple substrate degradation is possible in one pot reaction. This property could be exploited for treating other lipid and protein rich industrial wastes like dairy, tannery, slaughter houses, etc.
Acknowledgements
SRM-DBT Partnership Platform for Contemporary Research Services and Skill Development in Advanced Life Sciences Technologies (No. BT/PR12987/INF/22/205/2015) is acknowledged for providing LC-MS-MS facility. Also the authors are grateful to the Dept. of Biotechnology, School of Bioengineering, SRM University for the analytical services like FT-IR and GC-MS.
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