Open Access Article
Johannes
Tauber
a,
Markus
Rohr
b,
Thorsten
Walter
b,
Dieter
Schollmeyer
a,
Karin
Rahn-Hotze
c,
Gerhard
Erkel
b and
Till
Opatz
*a
aInstitute of Organic Chemistry, Johannes Gutenberg-University, Duesbergweg 10-14, 55128 Mainz, Germany. E-mail: opatz@uni-mainz.de
bDepartment of Molecular Biotechnology & Systems Biology, University of Kaiserslautern, Erwin-Schrödinger Str. 70, Building 70, 67663 Kaiserslautern, Germany
cR&D LGCR/Chemistry FF, Sanofi GmbH, D-65926 Frankfurt am Main, Germany
First published on 22nd March 2016
Oxacyclododecindione-type macrolactones exhibit highly potent anti-inflammatory activities even at nanomolar concentration. After the determination of the relative configuration of the stereocenters at C14 and C15 by total synthesis of 4-dechloro-14-deoxyoxacyclododecindione and 14-deoxyoxacyclododecindione, the absolute configuration has now been assigned by X-ray crystallography. Surprisingly, the absolute configuration is (14S,15R) which differs for C15 from that of the well-known derivatives of (S)-curvularin. The biological activities of both enantiomers of 14-deoxyoxacyclododecindione, obtained by racemic synthesis and optical resolution, were investigated and the ring conformation of the natural product was compared to that of (S)-curvularin and (R)-dehydrocurvularin.
Comparison of the optical rotations of the pure synthetic enantiomers of 4 ([α]26D = +23° (c = 0.57 g per 100 mL, MeOH) and [α]26D = −21° (c = 0.55 g per 100 mL, MeOH)) with the respective value of the natural product ([α]22D = +9.6° (c = 0.34 g per 100 mL, methanol-d4)) allowed the assignment of the naturally occurring isomer as the dextrorotatory enantiomer.2 Crystallization and subsequent X-ray crystallography of this enantiomer using anomalous dispersion at the chlorine substituent revealed that its absolute configuration is (14S,15R). This is in contrast to the assumed configuration and is rather surprising because the structurally related macrolactones (−)-1 and (−)-2 have the (S)-configurations at C15.17–19 A comparison of the crystal structures of (+)-4 with (−)-18,20 shows that the carbonyl group in both cases is perpendicular to the aromatic system and that the ester group adopts the trans-configuration (Fig. 2). However, the conformation of the 12-membered ring in (+)-4 differs considerably and is even less similar to that of (R)-curvularin (+)-1
20,21 (Fig. 3). Thus, the double bond between C10–C11 appears to have a significant effect on the ring conformation. Therefore, the crystal structure of (+)-4 was compared with the structure of (15S)-dehydrocurvularin (−)-2
22 and its enantiomer (+)-2,19 the conformations of which were previously discussed by Dai et al. and differ from each other due to the presence of solvent molecules in the crystal (Fig. 4).19 The crystal structures of (+)-4 and (+)-2 reveal a highly similar spatial orientation of both 12-membered rings and demonstrate that the ring conformation is largely governed by the unsaturation.
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| Fig. 2 Crystal structure of (14S,15R)-14-deoxyoxacyclododecindione ((+)-4) (left: hydrate), (15S)-curvularin ((−)-1) (center) and overlay of (+)-4 and (−)-1 (right, blue: (+)-4, yellow: (−)-1). | ||
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| Fig. 3 X-ray structures of (15R)-curvularin ((+)-1) (left) and overlay with (+)-4 (right, blue: (+)-4, grey: (15R)-curvularin (+)-1). | ||
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| Fig. 4 X-ray structure of (15S)-dehydrocurvularin (−)-2 (left), (15R)-dehydrocurvularin (+)-2 (center), and overlay of (+)-4 and (+)-2 (right, blue: (+)-2, yellow: (+)-4). | ||
The reason for the inconsistency in the orientation of the methyl group at C15 between the oxacyclododecindione and the curvularin series is unclear and worthwhile of investigation. Given the close structural relationship of lactone 4 and oxacyclododecindione (5), it might be speculated that the latter natural products could have (14R,15R)-configuration if 4 is its direct biogenetic precursor but an independent analysis is absolutely required in view of the nonuniform stereochemistry within this series.
| (CAGA)9x-MLP-Luc (Smad2/3) | pgl3-TK-7xN4 (Stat6) | Optical rotation | |
|---|---|---|---|
| IC50 (nM) | IC50 (nM) | ||
| IC90 (nM) | IC90 (nM) | ||
| HepG2 cells were transiently transfected with the indicated reporter gene construct and the constitutively active pRL-EF1α reporter gene and stimulated with 5 ng mL−1 TGF-β or 5 ng mL−1 IL-4 with or without test compounds for 16 h as described in Materials and methods. | |||
| Natural (14S/15R)-14-deoxyoxacyclododecindione ((+)-4) | 198.2 ± 7.8 | 140 ± 5.2 | [α]22D = +9.6° (c = 0.34 g per 100 mL, methanol-d4) |
| 402 ± 5.3 | 396 ± 4.2 | ||
| Racemic 14-deoxyoxacyclododecindione ((±)-4) | 137.9 ± 4.8 | 58.4 ± 2.6 | — |
| 485.17 ± 5.2 | 214.3 ± 4.7 | ||
| Synthetic (14S/15R)-14-deoxyoxacyclo-dodecindione ((+)-4) | 90.1 ± 9.6 | 20.1 ± 1.4 | [α]26D = +23° (c = 0.57 g per 100 mL, MeOH) |
| 221.7 ± 15.8 | 87.9 ± 2.9 | ||
| Synthetic (14R/15S)-14-deoxyoxacyclo-dodecindione ((−)-4) | 2400 ± 11.6 | 343.0 ± 1.2 | [α]26D = −21° (c = 0.55 g per 100 mL, MeOH) |
| 8050 ± 43.6 | 2134.4 ± 1.5 | ||
The synthetic, naturally occurring enantiomer (+)-4 at concentrations of IC50 = 90 nM (Smad) and IC50 = 20 nM (Stat6) is around 27- and 17-fold more active than its synthetic antipode (−)-4 (2400 nM and 343 nM, respectively, as measured for IC50 and supported by the IC90 data, see Table 1). Thus, the second hypothesis (see above) was disproved and the higher activity of synthetic (+)-4 compared to the isolated natural product (198 nM and 140 nM) appears to originate from a higher degree of purity which is consistent with the higher optical rotation of synthetic (+)-4.
:
ethanol
:
methanol 5
:
1
:
1. Rt ((+)-4) = 6.2 min, Rt ((−)-4) = 4.5 min. Preparative, chiral HPLC was performed on a chiralpak AD-H column, 250 × 30 mm i.D., flow 30 mL min−1. Solvent system heptane
:
ethanol
:
methanol 5
:
1
:
1.
The polarimeter values were measured with a Perkin-Elmer 241 polarimeter at 546 nm and 578 nm. The data were extrapolated to a wavelength of λ = 589 nm by using the Drude equation.23
Crystallization was performed by the solvent diffusion method using ethyl acetate and petroleum ether.
X-ray crystallography of (+)-4 was performed on a STOE IPDS 2T with Mo-Kα radiation (graphite monochromator).
CCDC 1454207 contains the supplementary crystallographic data for (14S/15R)-14-deoxyoxacyclododecindione (+)-4.
Footnote |
| † Electronic supplementary information (ESI) available. CCDC 1454207. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/c6ob00430j |
| This journal is © The Royal Society of Chemistry 2016 |