Ian
Swyer‡
a,
Ronald
Soong‡
b,
Michael D. M.
Dryden
a,
Michael
Fey
c,
Werner E.
Maas
c,
André
Simpson
*b and
Aaron R.
Wheeler
*ade
aDepartment of Chemistry, University of Toronto, 80 St. George St, Toronto, ON M5S 3H6, Canada. E-mail: aaron.wheeler@utoronto.ca; Fax: +1 (416) 946 3865; Tel: +1 (416) 946 3864
bDepartment of Chemistry, University of Toronto Scarborough, 1256 Military Trail, Toronto, ON M1C 1A4, Canada. E-mail: andre.simpson@utoronto.ca; Fax: +1 (416) 287 7279; Tel: +1 (416) 287 7547
cBruker BioSpin Corp, 15 Fortune Drive, Billerica, Massachusetts 01821-3991, USA
dDonnelly Centre for Cellular and Biomolecular Research, University of Toronto, 160 College St, Toronto, ON M5S 3E1, Canada
eInstitute for Biomaterials and Biomedical Engineering, University of Toronto, 164 College St, Toronto, ON M5S 3G9, Canada
First published on 19th October 2016
Nuclear magnetic resonance (NMR) spectroscopy is extremely powerful for chemical analysis but it suffers from lower mass sensitivity compared to many other analytical detection methods. NMR microcoils have been developed in response to this limitation, but interfacing these coils with small sample volumes is a challenge. We introduce here the first digital microfluidic system capable of interfacing droplets of analyte with microcoils in a high-field NMR spectrometer. A finite element simulation was performed to assist in determining appropriate system parameters. After optimization, droplets inside the spectrometer could be controlled remotely, permitting the observation of processes such as xylose–borate complexation and glucose oxidase catalysis. We propose that the combination of DMF and NMR will be a useful new tool for a wide range of applications in chemical analysis.
A key limitation of NMR is its low mass sensitivity,4 a disadvantage for applications involving analytes present at low concentrations or for those involving compounds that are difficult or expensive to synthesize. Several strategies have been developed to address this challenge, the most common being the use of increased static magnetic field strengths (which generates a larger population of spins aligned with the field); this has led to the trend of ever-increasing sizes and costs of cutting-edge NMR spectrometers. A second strategy to solve low mass sensitivities in NMR is hyperpolarization, a technique in which the nuclear spin polarization state is brought to a level far higher than the equilibrium value, prior to analysis. For example, dynamic nuclear polarization5 (DNP) is now a common technique in NMR imaging, useful for studying metabolic flux in complex biological samples (e.g., perfused model-organ systems6). Finally, a third strategy is to reduce the size of the receiver coil, which has led to the development of so-called microcoils (i.e., coils with sub-mm diameters). This approach leverages the fact that the magnetic flux density induced by a unit current (and therefore the voltage induced in the coil by nuclear spins) increases at a greater rate than the resistive noise, leading to improved signal-to-noise ratios.7,8
The growing interest in the use of microcoils for NMR spectroscopy has triggered a related movement to develop micro-volume systems that can position samples of interest near the coil and ensure appropriate filling factors.9 A number of groups have described innovative microchannel/microcoil NMR systems employing solenoid microcoils,10–12 planar microcoils,13–18 microstriplines,19 and microslots20 that have proven useful for a variety of applications. But the most common paradigm of enclosed microchannels with continuous flow has two limitations for combination with NMR spectroscopy. First, while microcoils have small detection volumes (i.e., the volume of solution adjacent to the microcoil), most microchannel-based systems suffer from large dead volumes associated with the pumps and tubing used to flow the samples through the channels (note that when microcoils are used to study solids21,22 they are immune from this issue). Second, if one wishes to study time-resolved reaction phenomena in microchannels, it is necessary to continuously flow reagents through the system, which results in increased reagent use. For example, one study which employed solenoid microcoils12 evaluated protein unfolding dynamics after reaction-times ranging from 3.8 s to 114 s, by varying the flow rate from 60 μL min−1 to 2 μL min−1, respectively. This increased reagent use is exacerbated by the fact that microcoils often have detection volumes in range of microliters; thus, depending on kinetics and acquisition parameters, microfluidic systems can require the use of hundreds to thousands of microliters of sample per experiment. A second paradigm for microscale NMR uses plugs or droplets within channels or tubes to study reactions. For example, Kautz et al.11 interfaced a droplet microfluidic system with a custom solenoid microcoil and highlighted the promise of the technique in an automated analysis of a library of compounds for pharmaceutical research. The advantage of this system is the elimination of dead volume issues found in continuous-flow microfluidics. Further, one could potentially use this type of system to de-couple reaction time from flow; however, the initiation of reactions inside the spectrometer for this type of system has not been demonstrated, and precise positioning of sample droplets relative to the microcoil is challenging.10 There is thus a need for a new technique that allows for complete user-control over micro-scale volumes of reagents and analytes in microcoil-NMR spectroscopy.
Digital microfluidics (DMF) is a third microfluidic paradigm which may be able to fill the need described above. In digital microfluidics, droplets of fluid are precisely manipulated on an insulated, hydrophobic electrode array by applying appropriate voltages to sequences of electrodes in the array.23 DMF has previously been interfaced with analytical techniques such as mass spectrometry,24 electrochemistry,25 and immunoassays.26 Very recently, Lei et al.27,28 reported the first interface between DMF and magnetic resonance using planar microcoils. In this work, a low-field (0.46 T) magnetic relaxometer was used to detect changes in the T2 relaxation of water droplets as iron particles distributed therein became aggregated. This system represents an exciting step forward for portable NMR analysis, but the weak magnetic field makes it inappropriate for conventional NMR spectroscopy of chemical analytes.
Here we report the first system interfacing digital microfluidics with high-field NMR spectroscopy, appropriate for chemical characterization (i.e. identification of chemical shifts and chemical shift changes associated with reactions). DMF devices were developed to interface with a 920 μm outer-diameter planar microcoil, such that discrete μL-volume droplets could be manipulated onto and off of the coil surface, permitting the observation of processes such as xylose–borate complexation and glucose oxidase catalysis. We propose that this work represents an important first step for using DMF to characterize reaction dynamics with NMR, as well as breaking new ground for applications combining digital microfluidics with high magnetic fields.
ω = γB | (1) |
The initial magnetic flux density is altered as the magnetic moments of the sample align to the applied field to either enhance or reduce the original flux density. This is formally expressed in the constitutive relation (2) which gives the static field B0,
B0 = μ0(H + M) | (2) |
M = χiH | (3) |
To approximate magnetic flux intensity variations in droplets on a DMF device, we note that in the sample volume the magnetic field H is given by the following form of Ampère's law (as there is no external current flowing in this region).
∇ × H = 0 | (4) |
−∇·(μ0∇Vm + μ0M) = 0 | (5) |
To get a complete picture of how the induced magnetization will affect the signal from the spins of interest it is necessary to also have information on the magnetic flux density produced by the microcoil, known as the B1 field. The electromotive force (emf) generated within the microcoil after the excitation pulse by a particular spin is proportional to the magnitude of the magnetic flux density generated by the coil at that spin's location. The B1 field generated by a particular microcoil geometry carrying an applied current density Je can be solved using the general form of Ampère's Law.
∇ × H = Je | (6) |
We used 3D COMSOL Multiphysics (COMSOL Inc., Burlington, MA, accessed via license obtained through CMC microsystems, Kingston, ON), using the “magnetic fields, no current” module to solve for the B0 field expected from eqn (5). Cylindrical droplet geometries were used with the ends of the cylinder having a radius of curvature, R, approximated using eqn (7),31
![]() | (7) |
The COMSOL Multiphysics “magnetic fields” module was used to calculate the B1 field (according to eqn 6) produced by a microcoil designed to approximate that of the experimental setup. That is, the coil is located 23 μm below the droplet, has an outer diameter of 920 μm, with 4 turns and 30 μm spacing between turns, and has a wire height and width of 20 μm and 30 μm, respectively. An external current density of 1 A mm−2 was applied to each coil domain and all exterior boundaries were given the magnetic insulation boundary condition. The resulting fields from both simulations were then exported to generate histograms of the magnetic flux density variation within the droplet using custom Python routines. To calculate the weighted signal, each element was scaled according to the element's size and the magnitude of the B1 field generated by the microcoil at that element from the “magnetic fields” module. This information was then used to scale the histogram of the magnetic flux density from the “magnetic fields, no current” module.
After forming the electrode patterns, device top-plates were coated with a dielectric layer (either parylene C or silicon nitride). Parylene C films (3 μm) were deposited on device A substrates using a SCS 2010 Parylene Coater (Specialty Coating Systems) using 7 grams of parylene. Silicon nitride films (700 nm) were deposited on device B substrates via plasma enhanced chemical vapor deposition using an Oxford Instruments PlasmaLab System 100 PECVD (Oxford Instruments, UK). After dielectric layer deposition, a hydrophobic layer was applied by spin coating (2000 rpm, 30 s) a 1% w/w solution of Teflon AF in FC-40 and post-baking at 160 °C on a hot-plate for 10 minutes.
Electrical connections were made to the contact pads on DMF top plates using custom manifolds formed by laser printing/etching (using techniques similar to those described previously32,33). Briefly, each manifold was formed by printing laser toner in a pattern of eight circular electrodes (radius of 0.75 mm) connected to eight square contact pads (1.5 mm × 1.5 mm) onto an AP7156E Pyralux film using a Xerox Phaser 6700 printer (Norwalk, CT). When needed, pinholes in the patterns were filled in by tracing with a permanent marker. The printed sheet was then immersed in a 1:
2 solution of hydrochloric acid and 3% hydrogen peroxide until the patterns developed. After rinsing and drying, the circular electrodes were soldered to individual leads in a custom ∼4 m-long CAT5 ethernet cable. The other end of the manifold was affixed to the edge of a DMF top-plate (such that the square pads on the manifold made electrical contact with the contact pads on the device) using 3M970312 conductive adhesive (3M, St. Paul, MN).
DMF device top plates (as above) were assembled with a bottom plate bearing an NMR coil (as per below), with droplets sandwiched between the two plates. Droplet position was controlled by applying potentials (260–300 VRMS, 10 kHz for parylene-coated devices and 140–200 VRMS, 1 kHz for silicon nitride coated devices) between the driving and counter electrodes on the top plate. The potentials were programmed and managed using the open-source DropBot34 DMF control system via the CAT5 ethernet cable.
At the start of each DMF–NMR experiment, an integrated device/assembly was loaded into the central bore of the spectrometer so that the DMF device was oriented vertically. Briefly, the integrated device/assembly was pulled up the bore (from bottom to top), and the CAT5 ethernet cable was fed out of the top of the bore to connect with a DropBot.34 In a typical experiment, the sample was shimmed, and 1D 1H spectra were acquired using an 8 μs 90° pulse and an 8 kHz spectrum window, 16000 data points, averaging over 16 scans with a recycle delay of 1 second. In some cases, 1H–1H total correlation spectroscopy (TOCSY) spectra (generated from standard mixing sequences35,36) were acquired using phase sensitive (states-tppi) mode, a 5.5 μs 90° pulse, an 8 kHz spectrum window, a TOCSY mixing time of 120 ms, and a 7 KHz spin lock field strength, averaging over 8 scans with a recycle delay of 1 s. In the latter experiments, 16
000 data points were collected for each of the 128 increments in the F1 indirect dimension.
The first challenge for integrating DMF and NMR is determining how to interface droplet handling with an NMR microcoil. The Bruker planar microcoil used here (Fig. 1a) is a 920 μm outer-diameter four-turn copper coil buried under a 10 × 10 mm insulating coating (see Fig. S1 and S2 in the online ESI† for details). This geometry poses three key constraints for DMF: working area, droplet manipulation, and microcoil re-use. For the first constraint, the 10 × 10 mm active area is small relative to conventional DMF devices (which often cover several square centimeters of active area). Thus, the DMF devices used here were uncharacteristically small, comprising just six (Fig. 1b) or eight driving electrodes. For the second constraint, the standard “two plate” DMF mode23 (in which droplets are sandwiched between driving electrodes on one plate and a counter-electrode on the other plate) was not accessible for this technique – one of the “plates” is occupied by the NMR microcoil. Thus, in this work, DMF was operated in single-plate mode,23 in which droplets are manipulated via electrostatic forces generated by applying potentials between electrodes on the same plate. Finally, for the third constraint: the NMR microcoil was not disposable, which required that it be protected under a removable film (in this case 12.5 μm-thick FEP) that could be replaced after each use (this strategy has been reported previously for single-plate DMF37). The final DMF-microcoil assembly used here (accounting for each of the constraints described above) is shown in Fig. 1c. The distances between the microcoil and DMF device were chosen such that viscous forces were high enough to help keep the droplet in place as it was being loaded into the spectrometer but not so great such that they prevented the droplet from moving. This arrangement was found to be suitable for proof-of-principle, but for future work, we are working to generate custom microcoil assemblies that address the limitations described above.
The second challenge for integrating DMF and NMR is determining how to interface the DMF-microcoil assembly with the spectrometer (the instrument used here was a Bruker Avance III 500 MHz system). DMF devices are typically operated horizontally (where gravity is not a force that must be overcome), and in a system that allows for convenient tracking of droplet position by eye or camera. In contrast, in the new system reported here, the device is oriented vertically (inside the bore of the NMR magnet) and is located several meters away from the operator (Fig. 1d). A custom interface/cable was developed to allow for remote actuation (with no visual feedback), and it was determined that actuation electrodes must always be activated during the loading process to prevent gravity-driven droplet loss. The latter (always-on electrodes) reduces device lifetime, as the dielectric layer becomes irreversibly altered after long-term use.38 In addition, device lifetime appears to be limited by other phenomena, perhaps related to the interaction between the applied magnetic field and the device/cabling/interface (a topic of on-going research). In practice, devices were observed to enable reliable droplet movement (with no differences observed between devices bearing dielectric layers formed from silicon nitride or parylene-C) for several minutes within the spectrometer, which was sufficient for the applications described here. In on-going work, new prototypes are being developed that will allow horizontal (and presumably longer-lifetime) device operation.
The third challenge for integrating DMF and NMR is the necessity of using a geometry that minimizes heterogeneities in the magnetic flux density (see the Theory and simulations section for equations and details). To evaluate the magnetic flux inhomogeneity caused by the susceptibility mismatch between the droplet and the surrounding medium (air), eqn (5) was solved using finite-element numerical methods in COMSOL Multiphysics. Fig. 2a shows a three-dimensional representation of a droplet adjacent to the microcoil. When the 11.74 T-magnetic flux density B0 is applied along the z-axis, the magnetic moments of the molecules in the droplet align, inducing a secondary field that either opposes or enhances B0. Because water is diamagnetic, the induced secondary field in this case opposes B0, reducing the magnetic flux density within the droplet. This effect can be quantified in terms of a ratio relative to the applied field, ΔB/B0, measured in parts per million (ppm). This ratio is plotted as a heat-map for a zy-slice of the system for a 2 μL and a 4 μL droplet in Fig. 2b and c, respectively. As shown, the fields experienced by molecules in the different droplets vary from −3.8 ppm to −7 ppm below the applied field strength of 11.74 T. An alternate view of the system (featuring an xy-slice) is shown in Fig. 2c, with simulations of the flux density variation (as heat maps) in that plane for a 2 μL and a 4 μL droplet in Fig. 2d and e, respectively. As shown, the maximum variation in the different droplets in these dimensions range from −5.9 ppm to −7 ppm below the applied 11.74 T field.
Magnetic flux density variations within the sample (shown as heat maps in Fig. 2) are only part of the picture when considering spectral resolution. It is also important to consider the distribution of the B1 field produced by the microcoil. Specifically, according to the theory of reciprocity,29 the NMR signal induced in the coil by each molecule in the sample (that contributes to a feature in a spectrum) is proportional to the B1 field strength at that molecule's position generated by passing a unit current through the coil.29 Since, more specifically, this signal is proportional to the time rate of change of the dot product between B1 and the magnetic moment of a specific volume element, only the x- and y-components of the B1 field (B1xy,) are important. Thus, B1xy (modeled according to eqn 6) is shown as contour plots in Fig. 2, with each contour normalized to the maximum B1xy field strength found within the droplet, as there are no spins located outside this volume to induce a signal in the receiver coil. As expected, the maximum field within the droplet is observed just above the central coil, and the intensity falls to 1% of the maximum for the majority of the droplet volume at 0.5 cm and 1 cm from the center of the coil for the zx and xy planes, respectively. We arbitrarily chose 1% as a “cutoff,” assuming that molecules found outside of the 1% contour contribute negligibly to the overall measured signal. Applying this assumption, we determined that the meaningful variation in magnetic flux density for a 4 μL droplet (e.g., −6.3 ppm to −7 ppm in the zy plane) should be substantially less than that for a 2 μL droplet (e.g., −5 ppm to −6.8 ppm). Thus, we would expect larger band broadening (and lower overall signal) for the smaller droplet.
To explore the field-heterogeneity differences predicted for different droplet volumes more quantitatively, a histogram (Fig. 3(a)) was generated containing binned chemical shift values within 2 μL and 4 μL droplets, weighted by the volume and B1xy field intensity. As shown, even though the B1xy field produced by the coil is the same for the two droplet volumes, the bin containing the maximum signal for the 4 μL case (−6.80 to −6.85 ppm) is around 37% of the maximum, while the comparable bin containing the maximum signal for the 2 μL case (−6.55 to −6.60 ppm) contains only 24% of the maximum. Likewise, a comparison of the signal-containing bins in Fig. 3(a) reveals that the 4 μL case has a markedly narrower excitation distribution than the 2 μL case [a point made more clearly in the inset to Fig. 3(a)]. These simulations highlight the importance of selecting an appropriate droplet size relative to the microcoil geometry; that is, for this coil, a 4 μL droplet is expected to produce higher signal and improved spectral resolution than a 2 μL droplet. This prediction is borne out experimentally – Fig. 3(b) shows representative spectra generated from droplets containing 0.1 M sucrose solution evaluated using the new DMF–NMR interface. As shown, the spectrum originating from the 4 μL droplet has narrower peaks than those observed in the spectrum from the 2 μL droplet. In addition, in the 4 μL case, the signal intensities for peaks assigned to the sucrose protons (∼3.5–4.3 ppm & ∼5.5 ppm) are enhanced relative to those of the solvent (∼4.8 ppm). The differences between the spectra are also likely influenced by better shimming, as the shimming coils more efficiently compensate for the magnetic field inhomogeneity in larger droplets as they have smaller variations in the magnetic field per unit volume. Finally, as is apparent from the geometries in Fig. 2, less precision is needed to position droplets in regions with strong (and relatively homogeneous) fields. Thus, in all of the data described below (when feasible), a ∼4 μL unit volume was used for each analysis. In the future, if smaller volume or greater spectral resolution is desired, smaller microcoils might be considered.
After demonstrating proof-of-concept for remote, in-spectrometer droplet movement, the next goal was to test whether the system could be programmed to initiate and observe a reaction within the spectrometer. A borate–xylose reaction was chosen for this test, in which aqueous borate complexes with the sugar as illustrated in Fig. 5(a). This system is particularly interesting, as it represents a class of reactions that is being explored for applications in saccharide sensors and carbohydrate separations.40 As described in the experimental section, separate droplets containing xylose and borate were loaded onto a device and then inserted into the spectrometer. Working remotely, the droplet containing xylose was made to move over the microcoil surface to obtain a spectrum before the reaction was initiated (Fig. 5(b)). As shown, spectra generated under this condition have only one peak (highlighted in green) downfield of the solvent peak, corresponding to the proton at position 1 (5.2 ppm). The two reagents were then mixed by merging the droplet and repeatedly cycling the merged droplet around the device39 for 30 s. A representative spectrum generated from the mixed droplet is shown in Fig. 5(c). As shown, the peak intensity of the non-complexed proton (highlighted in green) is reduced, and a new peak at around 5.7 ppm corresponding to the borate–xylose complex is observed (highlighted in red). This downfield shift in resonance for the proton at carbon 1 is consistent with previous studies,40 reflecting the change in the chemical environment upon complexation. The process represented by the data in Fig. 5 was repeated several times (on different devices), and represents the first example (to our knowledge) of a micro-volume reaction initiated within a spectrometer in a batch reactor-fashion (i.e., with no flow).
Finally, the capacity for the new system to follow a reaction time-course was probed using a glucose oxidase reaction, a system that is important in health and diagnostics, and one that has also been studied in microchannel-NMR devices.41 The scheme for this reaction is shown in Fig. 6(a); note that horseradish peroxidase was also included in the mixture to catalyze the breakdown of H2O2 into O2 (removing products and supplying more reagents to improve the kinetics of the reaction). A reaction time course generated using the new method is shown in Fig. 6(b). The downfield shift for the proton at carbon 1 (from ∼3.25 ppm to ∼4.25 ppm) indicates the expected production of D-glucono-1,5-lactone. Note that because this reaction was carried out in batch mode (with reaction time de-coupled from flow rate), the reagent volume required to collect these data (∼4 μL per reaction) was minimal.
Footnotes |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/c6lc01073c |
‡ These authors contributed equally. |
This journal is © The Royal Society of Chemistry 2016 |