Michael
Schmitt
*a,
Frans
Spiering
b,
Vitali
Zhaunerchyk‡
b,
Rienk T.
Jongma
b,
Sander
Jaeqx
b,
Anouk M.
Rijs
*b and
Wim J.
van der Zande
*b
aHeinrich-Heine-Universität Institut für Physikalische Chemie, D-40225 Düsseldorf, Germany. E-mail: mschmitt@uni-duesseldorf.de
bRadboud University, Institute for Molecules and Materials, Felix Laboratory, Toernooiveld 7c, 6525 ED Nijmegen, The Netherlands. E-mail: a.rijs@science.ru.nl; wim.van.der.zande@asml.com
First published on 10th November 2016
We present far infrared spectra of the conformer A of tryptamine in the 200 to 500 cm−1 wavenumber range along with resonant photoionization spectra of the far-infrared excited conformer A of tryptamine. We show that single-far-infrared photon excited tryptamine has highly structured resonance enhanced multi-photon ionization spectra, revealing the mode composition of the S1-state. Upon multiple-far-infrared photon absorption, the resonance enhanced multi-photon ionization spectrum broadens allowing ion gain spectroscopy to be performed. In the ion gain spectrum we detect the fundamental far-infrared modes but also combination and overtone bands with high efficiency. The implications to dip spectroscopy using a free electron laser compared to more conventional light sources are discussed.
Surprisingly, sharp features in the R2PI spectrum are not required for IR-ID spectroscopy.11–14 In fact, even with a completely featureless and unstructured R2PI spectrum, as was, for example, demonstrated for the Watson–Crick base pair of guanine–cytosine, IR-ID spectroscopy yields narrow IR resonances.15 This observation suggests large changes in the R2PI spectrum either in the form of a large shift or a large strength increase.
The conformer space of tryptamine, which is the chromophore of the aromatic amino acid tryptophan, has been studied in great detail.16–32 The formation efficiency of individual conformers strongly depends on the expansion and evaporation (or laser desorption) conditions as well as on the cooling rates in a molecular beam in which the tryptamine molecules are captured.25,26 Park et al.16 were the first to use the rotational contours in the fluorescence spectrum to deduce that the excitation spectrum of tryptamine contains seven different conformers out of the possible 27 conformers, which they named A, B, C(1), C(2), D, E, and F.
The low energy vibrations of tryptamine have been studied using single vibronic level fluorescence (SVLF) spectroscopy24 and conformation-specific ionization-detected stimulated Raman spectroscopy.31,32 In the present paper we report the low energy excitations between 200 and 500 cm−1 in tryptamine A using an intense Free Electron Laser (FEL) light source. We concentrate on the most abundant conformer A studied under conditions where the contribution of other conformers is small. We first present far infrared spectra with ion dip spectroscopy using R2PI as probe in the UV. We continue with evidence on the number of IR photons being absorbed and with the evolution of the IR-UV DR spectra upon increasing the IR intensity. We conclude that in 200–500 cm−1 excitation range intramolecular vibrational redistribution (IVR) is a slow process. We find that tuning the IR intensity provides an opportunity for a novel form of sensitive ion gain spectroscopy, in which, surprisingly, many combination bands are detectable. These insights may well lead to new methodology for investigating low energy vibrations and the IVR dynamics.
IR-ID spectra were taken by fixing the UV frequency of the dye laser to the S1 origin transition of a specific conformer and scanning the IR frequency of FELIX in the range of 200 to 500 cm−1. The ion signal from the UV laser is monitored and shows dips if IR resonances are excited that share a common ground state level with the UV transition.
The source of far infrared radiation is the Free Electron Laser for Infrared eXperiments (FELIX) in Nijmegen, providing tunable light from 2000 cm−1 to 60 cm−1 (5–167 μm). The infrared light is transported from FELIX to the interaction region through evacuated tubing to avoid absorption due to moist air. The relative bandwidth of the far-IR radiation is 0.5% full width at half maximum of the wavelength. The wavelength is calibrated using a spectrometer with an accuracy of 5 cm−1; however, the relative frequency is known to better than 1 cm−1. In the following, IR is used to imply the full IR + far IR part of the spectrum. The output of FELIX consists of at ten macropulses per second. Each macropulse has a duration of about 7 microseconds and consists of about seven thousand micro-pulses each with a duration of a few picoseconds separated by one nanosecond. The energy per macropulse is of the order of 100 mJ. The molecular beam velocity with argon as carrier gas is such that most of the molecules interact with the full IR macropulse. Both IR and UV wavelengths can be tuned independently. The delay between the IR pulse and the UV pulse can be controlled as well. In our experiments, FELIX was operated at 5 Hz and the ionization laser at 10 Hz to enhance the signal quality of the ion-dip and other double resonance signals. FELIX was blocked regularly to control that both channels do not have a different off-set.
In all experiments, the molecules were subjected to the full FEL pulse of 7 microseconds duration; near the end of this pulse the UV laser was fired. This relative timing of IR and UV pulses was the same or all experiments.
Fig. 1 Comparison of the CC2/cc-pVTZ calculation (upper trace) with the IR-ID spectrum (middle trace) and the SVLF spectrum from ref. 24 (lower trace) of tryptamine A. The asterisks in the IR-ID spectrum mark the spectral positions which are used for the IR-UV double resonance spectra described in Section 3.2. The mode numbering refers to that given in Fig. S1 and Table S1 of the ESI.† |
The IR-ID spectrum is compared on the same wavenumber scale with single vibronic level emission spectra from ref. 24, and the CC2/cc-pVTZ ab initio calculated vibrational spectrum. The mode numbering used in Fig. 1 refers to the normal modes, given in Table S1 (ESI†) and discussed in detail later (Section 4).
IR-ID spectra of the other conformers (B to F) of tryptamine were also recorded. They are shown in the ESI.† In the present work however, we will concentrate on the A conformer of tryptamine.
All three IR-UV DR spectra of Fig. 2 show a decrease of the signal at the origin band of the A conformer at 34915.6 cm−1 caused by the reduction of the ground state population upon IR excitation. We note here that the far-IR radiation from FELIX is strongly attenuated to the values given in Fig. 2. Therefore, the decrease of the ion signal of conformer A is smaller than what has been obtained for the IR-ID spectra in Fig. 1. The three experiments excite vibration 6 at 237.0 cm−1, vibration 8 at 341.5 cm−1 and vibration 12 at 468.0 cm−1, respectively. The slight reduction of the B conformer origin at 34895.9 cm−1 can be traced back to a partial overlap of the 237.0 cm−1 band with a vibrational band of the B conformer at 238.5 cm−1 (cf. Fig. S2 of the ESI†). In all three spectra, a number of sharp new bands appeared in the R2PI spectrum associated with the excitation of vibrational excited tryptamine A molecules.
The three difference spectra show ion dips (negative signals) as well as ion gains (positive peaks). As will be shown in the discussion, the ion gain peaks in the ionization spectrum can be understood from ionization of vibrationally excited states in the electronic ground state to vibrational levels in the S1 state. While exciting at 341.5 cm−1 and at 468.0 cm−1, the beginning of a continuum can be observed at the red of the origin band next to more sharp features. Some of the ion gain peaks are marked to indicate that at these UV wave numbers also IR-UV ion gain spectra (see Section 3.3) have been taken.
In a subsequent experiment, we varied the fluence of the IR photon beam in order to check whether we can increase the number of IR photons being absorbed within a macropulse. Fig. 3 shows the R2PI spectra with and without interaction with 341.5 cm−1 IR radiation at different IR macropulse energies (0.54, 5.4, and 37 mJ, respectively). Increasing the IR pulse energy leads to nearly full depletion of the origin band signal and hence a 100% dip signal of the pumped band. Simultaneously, the shape of the R2PI spectrum of vibrational excited molecules changes into a broad featureless background. The narrow peaks observed at low power do not increase, but seem to disappear in a broad background.
Fig. 3 Macropulse energy dependence of the R2PI spectra after pumping the IR resonance of the A conformer at 341.5 cm−1. The right column shows the difference spectra of R2PI with IR and without IR. |
The observation that an increased IR power changes the spectra qualitatively indicates that the number of absorbed IR photons is different. The possible processes are ladder climbing and IVR with subsequent second absorption in the fundamental band. The process of IVR results in a heterogenous collection of molecules in different modes giving rise to a multitude of transitions between different excited low energy vibrational levels in both electronic states. We note that near 34884 cm−1 there is a dip in the broad background of the R2PI signal (cf.Fig. 3). The zero signal in the difference spectra reflects probably a spurious compensation of a reduction in signal due to depletion of the C conformers, which also has a resonance around 341 cm−1 (cf. Fig. S2 of the ESI†) and an increase in the R2PI response of the vibrational excited A conformer. This disappearance of the additional sharp R2PI lines and the transformation of the R2PI spectrum into a nearly continuous background around the origin band (cf. right column of Fig. 3) inspired us to obtain ion gain spectra using ionization wavelengths different from the origin band.
Fig. 4 compares the IR-ID spectrum obtained via excitation of the origin band of the tryptamine A conformer and scanning the IR laser (a) with the IR spectra taken upon UV excitation at the positions marked with † (b), * (c), ‡ (d), ● (e), ○ (f), and □ (g) in Fig. 2. The intensity of the UV laser was chosen such that the UV laser alone gave no detectable ionization of ground state molecules. The IR laser macropulse energy was chosen at the intermediate value of 5.4 mJ with respect to the results in Fig. 3 such that the R2PI spectrum shows broadening.
Fig. 4 Trace (a) shows the IR-ID spectrum of tryptamine A. Traces (b) and (c) show the IR-UV gain spectra obtained by pumping the newly detected bands † (34912 cm−1) and * (34850 cm−1), from Fig. 2, while scanning the IR laser. Traces (d) and (e) IR-UV gain spectra obtained by pumping the newly detected bands ‡ (34897 cm−1) and ● (34915 cm−1). (f and g) IR-UV gain spectra obtained by pumping the newly detected bands ○ (34863 cm−1) and □ (34950 cm−1). The symbols refer to the bands in Fig. 2. The crosses mark the IR wavenumbers, at which the new UV bands were detected. Dashed lines connect fundamental vibrations, straight lines combination bands. |
The peaks, which are present in the IR-ID spectrum and associated with the fundamental bands of tryptamine A (Fig. 1 and trace a of Fig. 4), are again observed in the ion gain spectra with even a better signal to noise ratio. The dashed lines in Fig. 4 connect these fundamental excitations. The spectra in Fig. 4b–g were obtained by exciting the new bands at 34912 cm−1 and 34850 cm−1 († and * in Fig. 2) connected to the new bands upon IR pumping at 237 cm−1. The UV wavenumbers of 34915 and 34896 cm−1 refer to new bands upon IR pumping at 341.5 cm−1 (‡ and ● in Fig. 2). UV excitation at 34863 cm−1 and 34950 cm−1 (○ and □ in Fig. 2) refers to IR pumping at 468 cm−1. The crosses (X) in the ion gain spectra indicate the far-IR wavenumbers, which are linked to the respective additional UV bands in the R2PI spectra of Fig. 2. For example, when pumping the band marked with † in Fig. 2, which appears only upon FIR pumping at 237 cm−1, there is a strong propensity to this band in the IR-UV gain spectra, shown in Fig. 4. This propensity between the UV wavenumber at which a new band in the IR spectrum appears and the intensity of the respective band in the IR-UV gain spectra is symbolized by the crosses in Fig. 4.
In our experiment, we observed 100% depletion of the ion signal. However, the maximum depletion possible with single-photon absorption in a closed two-level system is only 50%. This suggests that the excited state undergoes a reaction either in the form of fragmentation, IVR, or subsequent excitation by a second IR photon in a ladder climbing process. After careful examination of the mass spectra, we exclude fragmentation for the pulse and photon energies used here. A macropulse of the FEL consists of more than five thousand micro-pulses of picosecond duration, separated by one nanosecond intervals. Using reasonable excitation strengths of 5–50 km mol−1 for a far-IR vibrational mode, one can estimate that a single micropulse has an excitation probability of 0.15–1.50%, implying that absorption of a few photons at full FELIX power during the microsecond macropulse is possible and the ion signal depletion can indeed exceed 50%. Hence, multiple photon absorption is a possible process. Regarding the possibility of IVR, a certain density of states is required. IVR becomes in general exponentially faster with increasing excitation energies. From a normal mode analysis, we predict that the vibrational state density calculated by direct count is below one state per wavenumber for the region of the present study, which is considered insufficient for IVR to take place. The nature of the vibrational modes does play a significant role and may affect the state count. The modes of lowest frequencies in tryptamine are torsional modes of the ethylamino side chain. Their frequencies are overestimated, even considering anharmonic corrections. Nonetheless, the state density at far-IR one-photon conditions is not large enough to enable IVR. Indeed, one can observe well-structured DR-R2PI spectra after pumping far IR transitions at low fluences, which requires the survival of the energy in the excited modes during a macropulse (7 μs).
The duration of our macropulses makes the present experiment different from experiments using nanosecond pulse IR sources, where the note can be added that for now no such lasers exist in the 200–500 cm−1 wavenumber region. In general, nanosecond laser sources require a much higher IVR rate to allow multiple photon absorption. The possibility of second (IR) photon excitation during the macropulse is discussed below.
The simulated spectrum (in red) in Fig. 5 consists of the (cold) transitions from the vibrationless ground state (mainly the electronic origin 000 and the fundamental transition to vibration 110), and of transitions originating from the excited level of vibration 6 in the ground state, the most prominent one being the diagonal 611 transition and also some off-diagonal transitions like 601510. Saturation of IR excitation is assumed, leading to the same population in the ground and vibrational state. The agreement between the positions and intensities of the additional lines in the R2PI spectrum is surprising considering the simple parameter free model used. Only one of the additional lines in the R2PI spectrum is missing in the simulation. An explanation of the missing peak might be slight contributions from the B conformer, since the 237 cm−1 band has overlap with the 239 cm−1 band of the B conformer, cf. Fig. S2 of the ESI.† Also the absorption spectrum after IR excitation at 341.5 cm−1 was calculated with the same assumption in the Franck–Condon approximation. It is shown in the ESI† (Fig. S3).
As mentioned above, the fact that the spectrum at low macropulse energy can be interpreted by Franck–Condon arguments implies that the IVR rate after a one photon absorption is sufficiently slow that IVR does not occur during the macropulse. Furthermore, the structured and well-resolved R2PI spectra show that one far-IR photon excitation is not followed by IVR (with a possible exception of the 468 cm−1 resonance, where the R2PI spectrum in Fig. 2 already shows a weak continuous background). The IR laser full width at half maximum bandwidth of 0.5% implies that with an anharmonicity up to a few percent a second photon excitation is possible. As the state density increases sharply with excitation energy, the IVR rate after two-photon absorption may allow IVR to occur more easily. After absorption of a second ladder photon, the strongly enhanced IVR may facilitate absorption of multiple photons in the original fundamental mode again.
The fact that the IR-UV double resonance spectra show a strong dependence on the FELIX power indicates multiple IR photon excitation processes to operate. To obtain the IR-ID spectrum of Fig. 1, FELIX was operated at rather large macropulse energies. In the experimental practice, the IR energy is chosen such that depletion of the origin band in the R2PI spectrum is significant and simultaneously that the decrease is approximately linear with IR power. This means that a rather high power, in the order of 50 mJ per macropulse, is chosen.
Fig. 6 IR-UV ion gain spectrum after excitation at 34950 cm−1 (expanded view of trace g of Fig. 4) along with the assignment of fundamentals, overtones, and combination bands. |
The intensities of the overtones and combination bands do not reflect their oscillator strengths, otherwise these would have been observed in the IR-ID spectrum (trace a of Fig. 4). The intensities of the fundamental modes can be compared among themselves and reveal their oscillator strength only by comparing the ion gain spectra with the IR-ID spectrum. Why would overtones and combination modes be more easily detected in the gain spectra? First, molecules excited in combination bands will have more complex R2PI spectra because of the many more combinations. Hence, single IR photon absorption into a combination band may already suffice to create ionization at many UV wavelengths different from diagonal transitions. The occurrence of fundamental and combination bands in one spectrum may reflect that under our conditions fundamental bands require two IR photon excitation to be observable, whereas for excitation of combination bands possibly a single photon may suffice. We note that at different ionization wavelengths, the relative intensities of the combination bands in the gain spectrum of Fig. 4 vary significantly. The detection efficiency of the combination band excited molecules depend on the UV laser wavelength, hence the R2PI spectrum is structured.
In obtaining the data in the ion gain spectra, we have selected ionization wavelengths coinciding with new features obtained in R2PI spectra at very low fluence. Indeed, propensity survives in the spectra of the chosen UV wavelength. This propensity rule is quite similar to the one in fluorescence emission. While in the latter, the propensity rule states, that the excited vibronic band has the largest FC factor with the respective vibration in the ground state, in IR-UV ion gain spectra the far-IR excitation of a certain vibrational mode leads to a higher probability for ionization through this vibronic band in the excited state. The present results certainly give rise to many possible experiments. Our next attempts will be to broaden the application of IR-UV gain spectroscopy to other systems than tryptamine. Also a more quantitative determination of IVR rates is of high interest in this energy range.
If we compare the present results with the more abundant body of IR-ID spectroscopy performed at wavelengths below 5 micron using standard laser systems, the amount of energy of a single photon is 5 to 10 times as large as used in our studies. At these high energies IVR distributes internal energy over a much larger number of low energy modes. Probably, features in the IR-excited R2PI spectra are so much broadened that at any individual UV wavelength the ionization yield is simply negligible. This interpretation explains also why for high frequency IR modes ion-dip spectroscopy still operates even when a R2PI spectrum of the cold ground state molecules is structureless. Upon excitation around 5 micron, the R2PI spectrum of the hot vibrational species effectively disappears.
One may wonder whether these observations are unique to tryptamine and why these effects have not been observed in the large body of work on IR spectroscopy using ID spectroscopy. Firstly, one should realize that FELIX is a special source in contrast to table top IR sources. Not only does FELIX allow routinely taking spectra up to wavelengths of 50 micron, but also the pulse structure with a pulse length of many microseconds makes IVR processes also at low IR photon energies important. The present study of tryptamine shows a clear distinction between two IR energy regimes: one-photon (far-IR) excitation well below 500 cm−1, where no IVR is observed; and the two-photon excitation, at energies that are high enough to facilitate IVR.
The above results indicate that the low frequency range in large molecules can be studied in a more sensitive way by making use of changes in structured R2PI ionization spectra. We believe that these results are general for medium sized molecules such as tryptamine. In spite of the easy access to light sources that allow IR-ID at these low IR photon energies, our results show that high intensity sources, such as FELIX, are critical for gaining insight in low frequency backbone motions that are highly relevant for structural questions in complex molecules.
Footnotes |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/c6cp02358d |
‡ Current address: Department of Physics, University of Gothenburg, 412 96 Gothenburg, Sweden. |
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