Open Access Article
Matteo
Zecchini
a,
Jordan R.
Lopez
a,
Scott W.
Allen
a,
Simon J.
Coles
b,
Claire
Wilson
c,
Hiroki
Akutsu
d,
Lee
Martin
*a and
John D.
Wallis
*a
aSchool of Science and Technology, Nottingham Trent University, Clifton Lane, Nottingham NG11 8NS, UK. E-mail: john.wallis@ntu.ac.uk
bUK National Crystallography Service, University of Southampton, Highfield Campus, Southampton, SO17 1BJ, UK. E-mail: S.J.Coles@soton.ac.uk
cDiamond Light Source Ltd, Harwell Science and Innovation Campus, Oxfordshire, Didcot, OX1 0DE, UK. E-mail: claire.wilson@diamond.ac.uk
dDepartment of Chemistry, Graduate School of Science, Osaka University, Osaka, Japan. E-mail: akutsu@chem.sci.osaka-u.ac.jp
First published on 25th March 2015
Hydroxymethyl-BEDT-TTF is converted by tosylation and elimination into exo-methylene-BEDT-TTF whose exocyclic double bond leads to a small increase in the oxidation potential, and from which radical cation salts with perchlorate and triiodide have been prepared, the latter showing semiconductor properties. Allyloxymethyl- and allylthiomethyl-BEDT-TTF, the first BEDT-TTF derivatives with an alkene in the side chain, have been prepared, along with a 1
:
2 radical cation perchlorate salt of the former, an insulator which contains a donor dication.
9 and subsequent treatment with t-butoxide eliminates tosic acid to give exo-methylene-BEDT-TTF 8 which has an exocyclic double bond connected to the BEDT-TTF system. We were unable to isomerise 8 to the donor 7 with an exocyclic methyl group and endocyclic double bond. The 1H NMR spectrum of donor exo-methylene BEDT-TTF shows signals for the alkene hydrogens at δ: 5.13 and 5.22 ppm and for the adjacent methylene group at δ: 3.52 ppm. In contrast donor 7 clearly shows the methyl and vinyl hydrogen signals (δ: 2.11 and 6.53 ppm) from the unsaturated ring and quite a different melting point.6,8 Furthermore, the 1H NMR of the dimethyl-VT donor 5 also clearly shows the presence of the methyl and vinyl hydrogens (Scheme 1).4
For the new donor 8 the consequence of conjugation of the organosulfur system with the exocyclic bond is a small increase in the first two oxidation potentials from 0.52 and 0.94 V (relative to Ag/AgCl) for BEDT-TTF to 0.56 and 0.97 V for exo-methylene-BEDT-TTF (Table 1).
| Compound | E 1 | E 2 |
|---|---|---|
| BEDT-TTF, 2 | 0.52 | 0.94 |
| exo-Methylene-BEDT-TTF, 8 | 0.56 | 0.97 |
| Allyloxymethyl-BEDT-TTF, 9 | 0.54 | 0.94 |
| Allylthiomethyl-BEDT-TTF, 10 | 0.54 | 0.94 |
Electrocrystallisation experiments on exo-(methylene)BEDT-TTF 8 in the presence of various anions were carried out, and the most successful was that with perchlorate which gave thin black crystals of a 1
:
1 radical cation salt. Furthermore, diffusion of a dichloromethane solution of iodine into a benzonitrile solution of 8 led to a 2
:
2
:
1 salt of the donor monocation with triiodide and iodine which has been shown to be a semiconductor.
The crystal structure of the 1
:
1 salt with perchlorate was measured at 100 K. The crystal system is monoclinic, in space group P21/c, with one donor cation and one perchlorate anion in the asymmetric unit (Fig. 1). The crystals are twinned and there is some orientational disorder of the perchlorate ion, as well as some of the commonly observed conformational disorder in the unsubstituted dithiin ring. The donor cations are organised in centrosymmetric pairs, and these are packed in the bc plane along with the anions (Fig. 2) which isolate pairs from one another. However, there are short contacts between pairs which lie side by side in the a direction (Fig. 3). In the donor cation the effect of the exocyclic alkene is a shortening of the endocyclic bonds connecting it to its sulfur and carbon atom neighbours to 1.758(13) and 1.457(18) Å. The alkene bond length is 1.32(2) Å but the apparent shortness may be due to some slight positional disorder of the terminal methylene group. The conformation of the substituted dithiin ring is an envelope with the sp3 carbon atom at the envelope's flap. The exocyclic sp2 methylene group lies to the opposite side. Within a donor cation dimer there are four short S⋯S contacts between the centrosymmetrically related TTF moieties (3.375(4) and 3.504(5) Å), and there are four short S⋯S contacts in the range 3.460(5)–3.535(5) Å between dimers (Fig. 3), thus providing a possible route for conduction of electrons through the structure. Unfortunately, the crystals were too brittle for attachment of electrodes for conductivity measurements.
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| Fig. 1 Molecular structure of the salt 8·ClO4 with anisotropic displacement parameters drawn at the 50% level. | ||
The X-ray crystal structure of the salt formed from donor 8 and iodine showed that it had a composition 2
:
2
:
1 donor
:
I3
:
I2. Two probe conductivity measurements showed that it was a semiconductor with room temperature conductivity of 1.89 × 10−4 S cm−1 and an energy of activation of 0.373 eV. The crystal system is triclinic and the space group is P
. The asymmetric unit is composed of one donor cation, one triiodide and half of an iodine molecule, since the iodine molecule lies on a centre of symmetry. The donor cations are organised in face to face pairs, which are almost surrounded by iodine molecules and triiodide anions (Fig. 4 and 5). However, there are side to side contacts between adjacent pairs of donor cations in the a direction (Fig. 6). The I–I bond lengths are 2.8054(13) Å in the iodine molecule and 2.8730(10) and 2.9535(10) Å in the triiodide anion, and the two species approach each other at 85° with a I⋯I contact of 3.3789(13) Å between them. Lines of triiodide anions run through the structure between the donor cation pairs, with successive short and long head to tail I⋯I contacts between triodides of 3.4274(11) and 3.8388(12) Å. Within the radical cation pairs there are four short S⋯S contacts between the S atoms of the TTF core, all of length 3.396(4) Å. In addition there are two sets of two short S⋯S contacts between adjacent cation pairs of length 3.462(4) and 3.543(4) Å (Fig. 6).
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| Fig. 4 A face to face radical cation pair surrounded by triiodide anions and iodine molecules in the crystal structure of 8·I3·0.5I2. | ||
![]() | ||
| Fig. 5 Triodide/iodine network in the bc plane in the crystal structure of 8·I3·0.5I2. Intermolecular contacts < 3.5 Å shown. | ||
The oxidation potentials of donors 9 and 10 were similar to those of BEDT-TTF. Electrocrystallisation experiments with 9 have yielded a 1
:
2 (Table 1) perchlorate salt whose crystal structure has been determined. Diffusion experiments with iodine only gave very small crystals of low quality. The crystal structure of 9·2ClO4, measured at 100 K, is monoclinic, in space group P21 and there are two donors each bearing a charge of 2+ and four perchlorate anions in the unit cell. The crystal structure is shown in Fig. 7. The donor dication shows the typically very long bond between dithiole units of 1.44(2) Å, and the four central C–S bonds, shortened by the 2+ charge, lie in the range 1.676(18)–1.717(18) Å similar to those reported for the dication of BEDT-TTF.11 The monosubstituted donor is disordered between two positions, which are roughly related by a 2 fold rotation about the long axis of the molecule. The positions differ in the point of attachment of the side chain to the dithiin ring, however the side chain lies so that the two structures have a common position for the terminal allyloxy group. This is achieved by the dithiin ring in the two structures adopting an approximate envelope conformation with the side chain attached to the “flap” methine carbon and oriented in a pseudo-axial manner (Fig. 8). There is no stacking of donor dications, but there are lines of dications along the a axis organised so that the molecules have edge to edge S⋯S contacts in the range 3.630(7)–4.198(8) Å. Adjacent donors in the b direction are strongly slipped relative to each other so that there are only three S⋯S contacts (3.728(7)–3.785(6) Å) between sulfurs from the unsubstituted end of one donor with sulfurs from the substituted end of the next donor (Fig. 9). The perchlorate anions are distributed among the donor dications, and each donor has S⋯O contacts to four anions (Fig. 10). Although donor stacking and segregated anions are common in BEDT-TTF radical cation salts, the larger donor charge in this case leads to anion contacts with the organosulfur residue. Conductivity measurements showed that the material was an insulator as might be expected.
![]() | ||
| Fig. 7 Crystal structure of 9·2ClO4 viewed down the a axis, showing the integration of dicationic donors with anions. | ||
![]() | ||
| Fig. 8 View of the donor dication of 9 showing the two disordered orientations of the side chain and how they overlap. | ||
9 (0.103 g, 0.18 mmol) in dry THF (5 ml) under nitrogen was added sodium tert-butoxide (27 mg, 0.28 mmol). The solution was stirred at room temperature for 3 h. The solvent was evaporated, DCM added and the mixture washed with water. The organic phase was collected and dried over Na2SO4. The product was purified by flash chromatography (3
:
1 hexane
:
ethyl acetate) to yield donor 8 as an orange solid (0.099 g, 97%), m.p. 165 °C (dec.). δH (400 MHz, CDCl3): 5.22 (1H, s, –C
CHH), 5.13 (1H, s, –C
CHH), 3.52 (2H, s, 6-H2), 3.23 (4H, s, 5′-,6′-H2); δC (100 MHz, CDCl3): 137.4 (CH
CH2), 117.1, 114.6, 113.8, 113.7, 113.5, 112.0 (2-,2′-,3a-,3a′-,7a-,7a′-C), 111.0 (–C
CH2), 36.5 (6-C), 30.1 (5′,6′-C); νmax: 2958, 2921, 2847, 1598, 1407, 1386, 1282, 1259, 1223, 1211, 1124, 1093, 1020, 899, 875, 799, 769, 729, 622, 530, 496; found C, 33.45; H, 2.09%, C11H8S8 requires C, 33.33; H, 2.08%.
:
1 = cyclohexane
:
ethyl acetate) (Rf 0.75) to yield compound 14 (0.99 g, 68%) as a red oil. δH (400 MHz, CDCl3): 5.81–5.91 (1H, m, –CH
CH2), 5.27 (1H, dq, J = 17.3, 1.6 Hz, –CH
CHH-trans), 5.20 (1H, dq, J = 10.1, 1.6 Hz, –CH
CHH-cis), 4.01 (2H dt, J = 5.7, 1.2 Hz, –O–CH2–CH
CH2), 3.83–3.89 (1H, m, 5 H), 3.77 (1H, dd, J = 9.5, 8.5 Hz, 5-CHα), 3.60 (1H, dd, J = 9.5, 5.5 Hz, 5-CHβ), 3.27–3.36 (2H, m, 6-H2); δC (100 MHz, CDCl3): 207.7 (C
S), 133.7 (–CH
CH2), 123.5, 122.1 (3a-,7a-C), 117.8 (–CH
CH2), 72.3 (–O–CH2–CH
CH2), 70.6 (5-CH2–O–), 42.6 (5-C), 31.3 (6-C); νmax: 2928, 2852, 1644, 1469, 1448, 1408, 1346, 1283, 1262, 1093, 1061, 989, 909, 770, 679; HRMS: (ASAP) found: 294.9403 (100%), C9H10O1S5 +H requires: 294.9408; found C, 36.86; H, 3.46%, C9H10O1S5 requires C, 36.73; H, 3.40%.
Further elution of the column gave bis(2-thioxo-1,3-dithiolo[4,5-b]1,4-dithiin-5-methyl)ether 15 (Rf 0.35) (0.15 g, 6%) as a brown solid, m.p. 117 °C (dec). δH (400 MHz, CDCl3): 3.84–3.93 (4H, m, –CH2–O–CH2), 3.69–3.77 (2H, m, 5-,5′-H), 3.29–3.34 (4H, m, 6-,6′-H2); δC (100 MHz, CDCl3): 207.5 (2 × C
S), 122.8, 121.9 (3a-,3a′-,7a-,7a′-C), 76.7 (–CH2–O–CH2–). 42.1 (5-,5′-C), 31.2 (6-,6′-C); νmax: 2847, 1478, 1404, 1261, 1112, 1054, 868, 517; HRMS: (ASAP) found: 490.8003, C12H10O1S10 + H requires 490.8011; found C, 29.48; H, 2.15%, C12H10OS10 requires C, 29.38; H, 2.04%. Over a period of time this compound decomposed.
CH2), 5.23 (1H, dq, J = 17.2, 1.4 Hz, –CH
CHH-trans), 5.16 (1H, dq, J = 10.4, 1.4 Hz, –CH
CHH-cis), 3.97 (2H, dt, J = 5.7, 1.3 Hz, –O–CH2–CH
CH2), 3.82–3.88 (1H, m, 5-H), 3.75 (1H, t, J = 9.6 Hz, 5-CHα), 3.28 (1H, dd, J = 9.6, 5.6 Hz, 5-CHβ), 3.23–3.32 (2H, m, 6-H2); δC (100 MHz, CDCl3): 188.7 (C
O), 133.8 (–CH
CH2), 113.9, 112.5 (3a-,7a-C), 117.7 (CH
CH2), 72.3 (O–CH2–CH
CH2), 70.7 (5-CH2–O–), 44.3 (6-C), 32.4 (5-C); νmax: 2918, 2853, 1673, 1621, 1509, 1241, 1093, 825, 763, 542; HRMS: (ASAP) found: 278.9632, C9H10O2S4 + H requires: 278.9636; found C, 38.69; H, 3.48%, C9H10O2S4 requires C, 38.85; H, 3.60%.
:
1 = cyclohexane
:
ethyl acetate) affording the desired product 9 as an orange solid (0.94 g, 53%), which was recrystallized from acetonitrile, m.p. 82–84 °C. δH (400 MHz, CDCl3): 5.83–5.94 (1H, m, –CH
CH2), 5.29 (1H, dq, J = 16.9, 1.8 Hz, –CH
CHHtrans), 5.22 (1H, dd, J = 10.5, 1.8 Hz, –CH = CHHcis), 4.02 (2H, dt, J = 5.5, 1.2 Hz, –O–CH2–CH
CH2), 3.78–3.84 (1H, m, 5-H), 3.74 (1H, t, J = 9.2 Hz, 5-CHα), 3.57 (1H, dd, J = 9.2, 5.0 Hz, 5-CHβ), 3.29 (4H, s, 5′-,6′-H2), 3.19–3.28 (2H, m, 6-H2); δC (100 MHz, CDCl3): 134.0 (–CH
CH2), 117.7 (CH
CH2), 114.2, 113.7, 113.3, 111.8, 111.6 (sp2-C), 72.3 (O–CH2–CH
CH2), 71.0 (5-CH2), 43.0 (5-C), 32.1 (6-C), 30.1 (5′-, 6′-C); νmax: 3075, 2977, 2929, 2847, 1644, 1472, 1448, 1408, 1347, 1283, 1260, 1094, 986, 907, 770, 680, 652, 555, 500, 449; HRMS: (ASAP) found: 454.8881, C14H14OS8 + H requires: 454.8883; found C, 36.91; H, 3.15%, C14H14OS8 requires C, 37.00; H, 3.08%.
O), 114.2, 112.7 (3a-,3a′-,7a-,7a′-C), 71.4 (CH2–O–CH2–), 44.4 (5-, 5′-C), 32.0 (6-, 6′-C); νmax: 2850, 1614, 1498, 1408, 1100, 768, 463; HRMS: (ASAP) found 458.8489, C12H10O3S8 + H requires 458.8468; found C, 31.54; H, 2.29%, C12H10O3S8 requires C, 31.44; H, 2.18%. Attempted cross coupling of 17 with thione 18 in triethyl phosphite was unsuccessful.
:
1 = cyclohexane
:
ethyl acetate) to yield compound 19 (1.14 g, 31%) as a red oil. δH (400 MHz, CDCl3): 5.68–5.78 (1H, m, –CH
CH2), 5.10 (1H, br d, J = 9.6 Hz, –CH
CHHcis), 5.09 (1H, dd, J = 17.1, 1.4 Hz, –CH
CHHtrans), 3.66–3.72 (1H, m, 5-H), 3.30–3.41 (2H, m, 6-H2), 3.14 (2H, d, J = 7.2 Hz, CH2–CH
CH2), 2.87 (1H, dd, J = 14.0, 8.8 Hz, 5-CHα), 2.80 (1H, dd, J = 14.0, 5.9 Hz, 5-CHβ); δC (100 MHz, CDCl3): 207.8 (C
S), 133.7 (–CH
CH2), 123.1, 121.7 (3a-,7a-C), 118.2 (–CH
CH2), 42.5 (5-C), 35.3 (5-CH2-S), 34.8 (–S–CH2–CH
CH2), 32.9 (6-C); νmax: 2905, 1631, 1484, 1403, 1054, 917, 574; HRMS: (ASAP) found: 310.9179, C9H11S6 + H requires: 310.9180.
CH2), 5.10 (1H, br d, J = 10.0 Hz, –CH
CHHcis), 5.09 (1H, dd, J = 17.5, 1.3 Hz, –CH
CHHtrans), 3.69–3.75 (1H, m, 5-H), 3.39 (1H, dd, J = 13.4, 3.1 Hz, 6-Hα), 3.33 (1H, dd, J = 13.4, 6.0 Hz, 6-Hβ), 3.14 (2H, d, J = 7.3 Hz, –CH2–CH
CH2), 2.89 (1H, dd, J = 13.9, 9.0 Hz, 5-CHα), 2.81 (1H, dd, J = 13.9, 5.8 Hz, 5-CHβ); δC (100 MHz, CDCl3): 188.9 (C
O), 133.8 (–CH
CH2), 118.2 (CH
CH2), 113.5, 112.3 (3a-,7a-C), 44.4 (5-C), 35.4 (5-CH2–S), 34.9 (–S–CH2–CH
CH2), 34.2 (6-C); νmax: 2910, 1670, 1628, 1503, 1405, 1226, 988, 916, 888, 754; found C, 36.60; H, 3.51%, C9H10OS5 requires C, 36.73; H, 3.40%.
:
1 = cyclohexane
:
ethyl acetate) affording the donor 10 as an orange-red solid (0.30 g, 31%), m.p. 107–109 °C. δH (400 MHz, CDCl3): 5.67–5.77 (1H, m, –CH
CH2), 5.08 (1H, br d, J = 10.8 Hz, –CH
CHHcis), 5.07 (1H, dq, J = 16.4, 1.2 Hz, –CH
CHHtrans), 3.58–3.63 (1H, m, 5-H), 3.21–3.27 (2H, m, 6-H2), 3.22 (4H, s, 5′-,6′-H2), 3.12 (2H, d, J = 7.2 Hz, –S–CH2CH
CH2), 2.82 (1H, dd, J = 14.0, 9.2 Hz, 5-CHα) 2.75 (1H, dd, J = 14.0, 5.8 Hz, 5-CHβ); δC (100 MHz, CDCl3): 133.7 (–CH
CH2), 118.0 (–CH
CH2), 113.8, 113.7, 112.8, 111.9, 111.6 (2-,2′-,3a-,3a′-,7a-,7a′-C), 42.9 (5-C), 35.3 (–S–CH2–CH
CH2), 34.9 (5-CH2S–), 33.6 (6-C), 30.1 (5′-, 6′-C); νmax: 2915, 1633, 1517, 1399, 1287, 1203, 913, 882, 772; found C, 35.81; H, 2.93%, C14H14S9 requires C, 35.74; H, 2.98%.
665 unique reflections (Rint = 0.16), 8291 with F2 > 2σ, R(F, F2 > 2σ) = 0.11, Rw (F2, all data) = 0.16. The data were measured at the National Crystallography Centre,12 Southampton University on a Rigaku AFC12 diffractometer equipped with enhanced sensitivity (HG) Saturn724+ CCD detector mounted at the window of an FR-E+ SuperBright molybdenum rotating anode generator (Mo Kα, λ = 0.71075 Å) with VHF Varimax optics (70 μm focus) using Crystal Clear software13 for data collection and reduction. The structure was solved with SHELXS97,14 and refined with SHELX2013
15 within OLEX2.16 Data were collected from a twinned crystal. ROTAX17 was used to identify the twin law, corresponding to a 2-fold rotation about the 1 0 0 direction: twin law [1.000 0.000 0.000] [0.000 −1.000 0.000] [−0.498 0.000 −1.000] and the twin component fraction refined to 0.71. Disorder in the ClO4 anion was modelled with two of the oxygen sites split over two sites with the occupancy refined competitively, 0.63/0.37(3), and isotropic atomic displacement parameters for partially occupied atoms. Distance restraints were applied to the Cl–O distances.
, Dc = 2.670 g cm−3, MoKα (λ = 0.71073 Å), μ = 6.281 mm−1, T = 296(2) K, 4911 unique reflections (Rint = 0.026), 3208 with F2 > 2σ, R(F, F2 > 2σ) = 0.049, Rw (F2, all data) = 0.15. Data were collected at room temperature using a Rigaku Mercury sII CCD configured with the Rigaku MicroMax-007HF generator and VariMax confocal mirror using Crystal Clear software13 for data collection and reduction. The structure was solved by SIR92
18 and refined with SHELX2013
15 using the Rigaku CrystalStructure® software package.
15 within OLEX2 Graphics in OLEX2.16 The structure was refined as a 2-component twin; twin law (1 0 0/0 −1 0/−1 0 −1) corresponding to 2-fold rotation about the 1 0 0 direction. Twin law identified using ROTAX and hklf5 file generated through WINGX.20 Twin scale factor refined to 0.394(4). Disorder was present in the sp3 carbon atoms of the substituted dithiin ring and the first methylene carbon of the side chain, and these were modelled over two half occupied sites. Distance restraints were applied and atoms were refined with isotropic displacement parameters. All geometric analyses were performed using PLATON21 and all illustrations were made with MERCURY.22 Data is deposited at the Cambridge Crystallographic Data Centre with code numbers CCDC 1051494–1051496.
Footnote |
| † CCDC 1051494–1051496. For crystallographic data in CIF or other electronic format see DOI: 10.1039/c5ra03921e |
| This journal is © The Royal Society of Chemistry 2015 |