F.
Schwemmer
*a,
S.
Zehnle
b,
D.
Mark
b,
F.
von Stetten
ab,
R.
Zengerle
abc and
N.
Paust
ab
aLaboratory for MEMS Applications, IMTEK – Department of Microsystems Engineering, University of Freiburg, Georges-Koehler-Allee 103, 79110 Freiburg, Germany. E-mail: frank.schwemmer@imtek.de
bHSG-IMIT – Institut für Mikro- und Informationstechnik, Georges-Koehler-Allee 103, 79110 Freiburg, Germany
cBIOSS – Centre for Biological Signaling Studies, University of Freiburg, 79110 Freiburg, Germany
First published on 26th January 2015
Accurate timing of microfluidic operations is essential for the automation of complex laboratory workflows, in particular for the supply of sample and reagents. Here we present a new unit operation for timed valving and pumping in centrifugal microfluidics. It is based on temporary storage of pneumatic energy and time delayed sudden release of said energy. The timer is loaded at a relatively higher spinning frequency. The countdown is started by reducing to a relatively lower release frequency, at which the timer is released after a pre-defined delay time. We demonstrate timing for 1) the sequential release of 4 liquids at times of 2.7 s ± 0.2 s, 14.0 s ± 0.5 s, 43.4 s ± 1.0 s and 133.8 s ± 2.3 s, 2) timed valving of typical assay reagents (contact angles 36–78°, viscosities 0.9–5.6 mPa s) and 3) on demand valving of liquids from 4 inlet chambers in any user defined sequence controlled by the spinning protocol. The microfluidic timer is compatible to all wetting properties and viscosities of common assay reagents and does neither require assistive equipment, nor coatings. It can be monolithically integrated into a microfluidic test carrier and is compatible to scalable fabrication technologies such as thermoforming or injection molding.
In centrifugal microfluidics, timed valving independent of the rotational frequency protocol has been demonstrated using valves actuated by external lasers or infrared light sources,5–8 external pressure sources9,10 or external mechanical actuation.11 While active valves allow for elegant fluidic automation, the trade-off is a more complex processing device and in most cases additional fabrication steps for production of the disposable cartridge.
Timing without employing external means, also referred to as passive timing, can be realized by employing capillary forces. Such passive timing is commonly used in capillary flow based microfluidics, by designing fluidic resistances in combination with surface tension-based passive pumping or geometric valves.12,13
In centrifugal microfluidics, passive valves are typically triggered at increasingly high rotational frequencies. For this purpose, geometric valves,14 hydrophobic patches15 and centrifugo-pneumatic valves16–18 are used. Another passive solution combines a geometric valve triggered at high rotational frequencies with a siphon valve primed by capillary forces at low rotational frequencies.19,20 Furthermore, the recently introduced miniature-stick-packs can be used for sequential release of pre-stored liquids at pre-defined rotational frequencies.21 However, all of these passive valves for timed release strongly depend on fabrication tolerances. The geometric valves and hydrophobic patches additionally depend on capillary forces. The accurate control of such dependencies is challenging and leads to considerable variations in rotational burst frequencies, as for example discussed by van Oordt et al.21 for reagent release. For a sequential supply of reagents according to the assay protocol, the trigger frequencies have to be sufficiently high to prevent pre-mature release, for example during transport or storage of the cartridge; the frequencies must increase with the release sequence and must not overlap with respect to its variations. As a consequence, sequential release of more than three liquids is a challenging task, in particular, if robust operation within cartridges that are compatible to cost efficient mass fabrication technologies is required.
Recently, a new type of passive timing independent of the rotational frequency based on dissolvable films was introduced.17 The dissolvable films are used to either block a fluidic path or an air vent. Upon contact with the liquid, the film starts to dissolve and after a certain time period, the path opens. By clever combination of dissolvable films with liquid and air routing, Kinahan et al. demonstrated automation of up to 10 sequential valving steps.22 However, the fabrication of such cartridges requires an extra fabrication step for introducing the dissolvable films and the dissolvable film is dissolved within the assay reagents. While the authors could show that for a PCR-based assay and an immunoassay, the dissolved film does not impact results,17 the use of such valves changes the composition of the assay, which can lead to issues for established assays.
This paper introduces the microfluidic timer as a new fully passive fluidic unit operation for precise temporal control of valving and pumping of typical assay reagents and samples. The timer can easily be combined with any unit operation, where actuation is achieved by compression and decompression of entrapped air volumes. Examples of such pneumatic operations are mixing by reciprocating flow,23,24 inward pumping25,26 or centrifugo-pneumatic cascading.27 The principle of the microfluidic timer is based on centrifugal pressures, pneumatic pressures and viscous dissipation, only. Therefore, the microfluidic timer is not restricted to any specific materials and can be fabricated monolithically with established fabrication technologies such as injection molding or thermoforming. Monolithic fabrication in this context means that the timer can be implemented within the same substrate, without additional fabrication steps, simply by structuring the timer features with the same technology as the rest of the microfluidic features.
We provide a theoretical model that can be used to accurately predict the delay time by network simulations in order to adapt release times to the specific assay needs. Additionally, the model is simplified to enable a more rough analytical prediction of delay times which in our opinion is sufficient for most implementations. The model is validated by comparing simulated timed valving to experimental data from different liquids that cover a wide range of typical assay reagents.
Experimentally we discuss a sequential release, and a release on demand mode. For the latter, within a given design of a microfluidic disk hosting four different liquids, routing of the four input liquids on demand in any user defined sequence is presented.
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Fig. 1 Functional principle of the microfluidic timer (upper) and stored pneumatic energy in the microfluidic timer during different steps of its operation (lower). A: Timer loading by applying a loading pressure. Air is compressed within the pneumatic chamber and the pneumatic energy is loaded. After pneumatic chamber 1 is completely filled, liquid overflows into pneumatic chamber 2a. The liquid volume transferred into pneumatic chamber 2a sets the timer, which defines the length of delay time. B: Delay time. The applied loading pressure is turned off and the pneumatic pressure pushes liquid out of pneumatic chamber 2a. The high viscous dissipation in the timing channel limits the flow rate. During this period, the pneumatic energy is released very slowly. C: Timer release. After the timing channel has been emptied of liquid, the flow rate temporarily increases by the viscosity ratio of liquid and gas and the pneumatic energy is abruptly released. This energy release can be employed to transport liquid e.g. for valving or pumping. One practical example for this is the priming of a siphon in centrifugal microfluidics, as further detailed in the next section (see Fig. 2). |
Epneu = ∫Vpneu10ppneudV | (1) |
The delay time is the time it takes for all of the liquid to flow out of pneumatic chamber 2. The start of the delay time is defined when the pressure applied for loading and setting the timer is turned off or significantly reduced.
The delay time ends at the timer release, when air replaces the liquid in the timing channel, abruptly changing the fluidic resistance and rapidly releasing the remaining stored pneumatic energy. For the case that the loading pressure is turned off completely, the delay time can be derived from a pressure balance between the pneumatic pressure difference ppneu of the enclosed air and the viscous pressure drop pvisc along the timing channel:
![]() | (2) |
![]() | (3) |
This differential equation can be solved for the delay time:
![]() | (4) |
For design of the microfluidic timer, eqn (4) can be used to calculate the delay time (see Tables 1 & 2). The parameters used for designing the delay time are the fluidic resistance of the timing channel, the volumes of pneumatic chambers 1 & 2, and the liquid volume in pneumatic chamber 2 at the start of the delay. For a liquid of viscosity η the fluidic resistance R of a rectangular channel of length l, height h, and width w can be calculated for w > h by:
![]() | (5) |
![]() | (6) |
Timer 1 | Timer 2 | Timer 3 | Timer 4 | |
---|---|---|---|---|
Cross section of the timing channel in μm × μm | 153 × 125 | 106 × 67 | 80 × 41 | 71 × 24 |
Total volume of pneumatic chambers V0 in μl | 357 | 278 | 208 | 160 |
Delay time estimated by eqn (4) in s | 1.9 | 11.2 | 38.7 | 123.6 |
Delay time from network simulation in s | 2.2 | 13.5 | 43.6 | 133.3 |
Measured delay time in s | 2.7 ± 0.2 | 14.0 ± 0.5 | 43.4 ± 1.0 | 133.8 ± 2.3 |
Timer 1 | Timer 2 | Timer 3 | Timer 4 | |
---|---|---|---|---|
Length of timing channel in mm | 1 | 2 | 3 | 4 |
Delay time estimated by eqn (4) in s | 5.2 | 10.3 | 15.5 | 20.6 |
Measured delay time in s | 5.8 ± 0.4 | 11.3 ± 0.5 | 18.8 ± 0.5 | 23.4 ± 1.0 |
From eqn (4) & (5) it can be seen that the delay time is linearly related to the fluidic resistance R, which in turn scales linearly with the length l of the delay channel. The delay time also scales linearly with respect to the volumes of pneumatic chambers 1 & 2 and the liquid volume in pneumatic chamber 2 at the start of the delay, as long as all three volumes are scaled by the same factor. Obviously, an increase in volume can thus be compensated for by decreasing the length of the delay channel for design of a specific delay time.
After priming, the siphon transfers the sample to the collection chamber (Fig. 2F). In order to transfer the complete sample to the collection chamber, it is beneficial to maintain a moderate rotational frequency at timer release (~15 Hz) (Fig. 2F). The moderate rotational frequency maintains a centrifugal pressure difference from the inlet chamber to the collection chamber and thus allows for transferring the complete liquid volume to the collection chamber. In such configurations, we define the start of the delay time as the time when the moderate rotational frequency is reached. The maintained centrifugal pressure counteracts the pneumatic pressure and reduces the pressure drop across the timing channel. As a consequence, the liquid outflow through the timing channel decreases and the delay time increases. To account for the increase in delay time, the following equation should be solved:
![]() | (7) |
This equation includes the centrifugal pressure term pcent (Vcomp) that depends on the filling heights of the different chambers and thus on the integrated flow rate and geometry of the timer. It can only be solved numerically. For that purpose we use a network simulation based approach which was described previously,25 and which is further detailed in the ESI.† With this network based simulation, we can predict liquid flow and fill levels throughout the fluidic processing. If the centrifugal pressure pcent is much smaller than the pneumatic pressure ppneu, the analytical estimation from eqn (4) can be used as a good approximation, as described further in the results section.
Due to the high pressures in the pneumatic chambers, the sealing foil buckles outwards. This deformation of the sealing foil increases the volume of the pressure chamber and decreases the pneumatic pressure. We calculated the actual pneumatic pressure from the rotational frequency and height of the liquid column at maximal rotation. All given volumes for the pressure chambers are measured. All calculations and simulations are based on these measured volumes for the pneumatic chambers.
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Fig. 3 Sequential release with the microfluidic timer. (Upper) Release of DI water at RT for the four different timer structures (Table 1). The timers were engineered to release at sequential points in time for DI water. (Lower) Timing of typical assay reagents and sequential release in opposite order of their viscosity demonstrated employing timers 1, 3 and 4. The delay time and the time to transfer the sample to the collection chamber depend on the viscosity of the sample. All experiments were performed in triplicate. The network simulations are described in detail in the ESI† (see Fig. S1). Error bars represent one standard deviation. |
The timers were filled such that the liquid with the highest viscosity (50% glycerol w/w, θ = (78 ± 6)°, η = (5.62 ± 0.02) mPa s, at 24 °C) was released first, then the liquid with medium viscosity was valved (50% w/w ethanol in DI water, θ = (36 ± 8)°, η = (2.56 ± 0.02) mPa s, at 24 °C) and finally, the liquid with the lowest viscosity was released (blood plasma η ~1.68 mPa s). As shown in Fig. 3, all liquids could be sequentially released in opposite order of their viscosities, with the delay times calculated by the network simulation (see ESI†).
To determine the viscosity of blood plasma, we used the microfluidic timer as a rheometer by iterative adaption of viscosity in the network simulation to fit the measured delay time. The resulting viscosity of ~1.68 mPa s falls well within the reference range for a healthy adult, which is reported to be 1.52–1.76 mPa s at 24 °C.29
As discussed previously, during timer release, the viscosity within the timing channel suddenly changes from liquid to air, resulting in a temporarily high flow and consequently, a higher viscous pressure drop in the inlet channel. This pressure drop leads to pumping of liquid radially inwards through the siphon channel, against the centrifugal force as employed previously by Zehnle et al. for pneumatic inward pumping.25 Since the centrifugal force can be adjusted by the frequency protocol upon timer release, it is possible to determine on demand whether the siphon does or does not prime. If a comparatively high rotational frequency is applied at the moment of timer release, siphon priming can be inhibited because the centrifugal force limits the amount of liquid pumped into the siphon. Under those circumstances the critical volume for priming the siphon is not reached and no liquid is transferred to the collection chamber. Applying a comparatively low rotational frequency at the moment of timer release, siphon priming is promoted as more liquid is pumped into the siphon channel. Under those circumstances the siphon primes and liquid is transferred to the collection chamber (see ESI†). Consequently, with an appropriate frequency protocol, it is possible to selectively valve exactly one out of multiple timing structures on demand without influencing all the others.
We demonstrate the valve on demand mode with a microfluidic disk containing four microfluidic timers that are released at four different delay times. The layout was designed using eqn (4) making use of the linear relationship between the delay time and the lengths of the timing channels (Table 2).
The microfluidic timers are designed such that after loading the timer, the microfluidic timers can release at all rotational frequencies below 28 Hz. Moreover, if the timer release happens at a rotational frequency of 14 Hz or below, the siphons prime. In contrast, if the timer release happens at a rotational frequency of 16 Hz and above, the siphons do not prime. That way timer release and valving are independently controllable.
All four timers were filled with 100 μl of DI water and the timers were loaded at 75 Hz rotational frequency. The delay time starts after a reduction of rotational frequency to 20 Hz by 15 Hz s−1. In order to prime one siphon valve, the rotational frequency was reduced to 14 Hz just before the predicted timer release of the corresponding timer. After priming of the siphon, the rotational frequency was increased back to 20 Hz. This “frequency dip” allowed us to selectively valve the siphon of one of the microfluidic timers, while all siphons of all other timers remained not primed. Fig. 4 shows the results for selective priming of siphons of each of the microfluidic timers. All of the experiments were repeated ten times. Selective transfer of the sample from one of the timers could be shown successfully in all 40 experiments. Since the initial loaded state could be restored by rotating at a high rotational frequency of 75 Hz (timer reset), this allowed us to transfer the samples from the microfluidic timers to the collection chambers in any user defined sequence by simply concatenating frequency protocols 1–4 according to user needs. In the future this may allow us to use one fluidic disk design for multiple assay protocols, by simply adjusting the frequency protocol to a different application.
It is worth noting that if one timer is released multiple times in sequence, liquid plugs can form in the siphon channel. Due to contact angle hysteresis this can increase the capillary pressure to a level, for which the siphon channel does no longer prime, even below 14 Hz rotation upon timer release. Such liquid plugs can be easily removed from channels by including an intermediate step at high rotational frequency above the Rayleigh Taylor instability.18 In our case, the critical rotational frequency to remove plugs from the 150 μm diameter siphon channel was ~80 Hz and an intermediate increase in rotational frequency to 90 Hz was included. The temporary high centrifugation ensured that no liquid plugs remained in the siphon channel.
By timing the release of pneumatically stored energy, the microfluidic timer circumvents a major limitation of many state of the art centrifugo-pneumatic unit operations that require fast changes in the rotational frequency. So far, fast frequency changes had to be provided by the processing device.25 In the future, employing a microfluidic timer, fast acceleration or deceleration rates are not required anymore to enable a quick release of pneumatic energy. Thus, it allows for centrifugo-pneumatic operations, such as pneumatic inward pumping, to be used in a much wider range of processing devices, e.g. standard laboratory centrifuges as used for example for the LabTube technology.30
Furthermore, the microfluidic timer enables to trigger valving after a specific delay time and this way enables to reduce or increase the spinning frequencies while the countdown of the timer is running. This creates an additional degree of freedom compared to state of the art valves, e.g., combining siphon based valving with the microfluidic timer allows for applying spinning frequencies during the countdown of the timer which are not accessible for state of the art capillary siphons or geometric- or centrifugo-pneumatic valves because those frequencies would initiate unintended valving.
Finally, the demonstrated capabilities of the timer in release on demand mode aim towards a universal cartridge design. With release on demand, a generic cartridge can automate timed valving for different assay protocols, simply by programming the protocol of the rotational frequency.
Furthermore, when using at increased temperatures, the microfluidic timer can be combined with a vapor-diffusion barrier to reduce air pressure and risk of delamination.31
Finally, the microfluidic timer can be generalized to other microfluidic areas besides centrifugal microfluidics, since it allows precise flow sequencing for multiple liquids with pressure sources that are comparatively simple, e.g. finger-actuated devices.32
Footnote |
† Electronic supplementary information (ESI) available: Details on the network simulation and theory of priming of the pneumatic siphons. See DOI: 10.1039/c4lc01269k |
This journal is © The Royal Society of Chemistry 2015 |