Ingo
Knepper
a,
Wilhelm
Seichter
a,
Konstantinos
Skobridis
b,
Vassiliki
Theodorou
b and
Edwin
Weber
*a
aInstitut für Organische Chemie, Technische Universität Bergakademie Freiberg, Leipziger Str. 29, D-09596 Freiberg, Sachsen, Germany. E-mail: edwin.weber@chemie.tu-freiberg.de
bDepartment of Chemistry, University of Ioannina, 45110 Ioannina, Greece
First published on 16th July 2015
Four trityl compounds differing both in the functional group (OH, OMe, NH2) at the specific trityl carbon and a para substituent, being bromine or phenyl at one of the phenyl groups, have been prepared and structurally studied by means of single crystal X-ray diffraction and making use of Hirshfeld surface analysis. Compared to the structures of corresponding prototypes and analogues, specific interaction modes and packing motifs including cluster aggregates as well as non-cluster type structures depending on the substitution and involving polymorphism were found, opening potential trend prediction with reference to crystal engineering being useful in this compound class.
Here we report the X-ray crystal structures of four specific trityl compounds (1–4, Fig. 1). Although being in close structural relation, they systematically differ both in the main functional group (hydroxyl, methoxy, amino) and the para substituent (bromo, phenyl) being present at one of the phenyl units. Based on a comparative discussion of the structural results, including previous findings and making use of Hirshfeld surface analysis,17 conclusions can be drawn that can be helpful for future aspects of crystal engineering involving this interesting field of compounds.18–20 Moreover, previous findings in the context have shown that different melting behavior of corresponding compounds are rather frequent indicating the potential existence of polymorphous structures,21–24 which is another inviting point of consideration for carrying out this study.
Compound | 1 | 2B | 2C | 3 | 4 |
---|---|---|---|---|---|
a P = (Fo2 + 2Fc2)/3 | |||||
Empirical formula | C19H15OBr | C25H20O | C25H20O | C20H17OBr | C19H16NBr |
Formula weight | 339.22 | 336.41 | 336.41 | 353.25 | 338.24 |
Crystal system | Monoclinic | Triclinic | Monoclinic | Orthorhombic | Monoclinic |
Space group | P21/c |
P![]() |
P21 | Pna21 | P21/c |
a/Å | 10.7736(2) | 15.6058(3) | 8.9849(6) | 12.1520(3) | 10.7837(2) |
b/Å | 15.2684(3) | 18.7804(4) | 5.7029(3) | 13.7838(3) | 15.2773(4) |
c/Å | 18.6621(3) | 21.1189(4) | 17.1999(11) | 9.5790(3) | 18.8871(4) |
α/° | 90.0 | 68.874(1) | 90.0 | 90.0 | 90.0 |
β/° | 104.275(1) | 74.947(1) | 99.978(4) | 90.0 | 104.273(1) |
γ/° | 90.0 | 74.080(1) | 90.0 | 90.0 | 90.0 |
V/Å3 | 2975.05(9) | 5462.16(19) | 867.99(9) | 1604.49(7) | 3015.52(12) |
Z | 8 | 12 | 2 | 4 | 8 |
F(000) | 1376 | 2136 | 356 | 720 | 1376 |
D c/Mg m−3 | 1.515 | 1.227 | 1.287 | 1.462 | 1.490 |
μ/mm−1 | 2.759 | 0.073 | 0.077 | 2.561 | 2.719 |
Data collection | |||||
Temperature/K | 90(2) | 100(2) | 100(2) | 173(2) | 100(2) |
No. of collected reflections | 30![]() |
107![]() |
12![]() |
8781 | 59![]() |
Within the θ-limit/° | 1.8–29.2 | 1.2–28.1 | 2.3–30.1 | 2.6–28.4 | 1.7–28.6 |
Index ranges ± h, ±k, ±l | −14/14, −20/20, −25/25 | −20/20, −24/24, −27/27 | −12/12, −8/8, −24/24 | −8/16, −14/18, −12/7 | −14/14, −20/20, −25/25 |
No. of unique reflections | 7905 | 26![]() |
4710 | 3219 | 7712 |
R int | 0.0244 | 0.0314 | 0.0222 | 0.0185 | 0.0223 |
Refinement calculations: full-matrix least-squares on all F2 values | |||||
Weighting expression wa | [σ2(Fo2) + (0.0435P)2 + 1.4259P]−1 | [σ2(Fo2) + (0.0595P)2 + 3.4661P]−1 | [σ2(Fo2) + (0.0561P)2 + 0.1424P]−1 | [σ2(Fo2) + (0.0282P)2 + 0.3652P]−1 | [σ2(Fo2) + (0.0428P)2 + 2.5837P]−1 |
No. of refined parameters | 387 | 1411 | 240 | 201 | 395 |
No. of F values used [I > 2σ(I)] | 6551 | 17![]() |
4409 | 2913 | 6771 |
Final R-Indices | |||||
R(=∑|ΔF|/∑|Fo|) | 0.0292 | 0.0521 | 0.0358 | 0.0231 | 0.0272 |
wR on F2 | 0.0801 | 0.1522 | 0.0952 | 0.0594 | 0.0782 |
S (=Goodness of fit on F2) | 1.035 | 1.005 | 1.037 | 0.940 | 1.006 |
Final Δρmax/Δρmin (e Å−3) | 0.60/−0.92 | 0.65/−0.43 | 0.34/−0.19 | 0.45/−0.44 | 0.92/−0.64 |
KPI (%) | 69.8 | 67.7 | 71.4 | 68.6 | 69.7 |
Total potential solvent accessible | |||||
Void volume/Å3 | — | 81.2 | — | — | — |
Void volume per unit cell/% | — | 1.5 | — | — | — |
Compound | 1 | 2B | 2C | 3 | 4 | |||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Molecule 1 | Molecule 2 | Molecule 1 | Molecule 2 | Molecule 3 | Molecule 4 | Molecule 5 | Molecule 6 | Molecule 1 | Molecule 2 | |||
a mpla means least-squares plane through the aromatic ring. 1, 3, 4: Ring A: C(1)⋯C(6); ring B: C(7)⋯C(12); ring C: C(13)⋯C(18). 2: Ring A: C(1)⋯C(6); ring B: C(7)⋯C(12); ring C: C(14)⋯C(19); ring D: C(20)⋯C(25). | ||||||||||||
Dihedral angles (°)a | ||||||||||||
mpla(A)–mpla(B) | 73.6(1) | 72.9(1) | 84.7(1) | 86.9(1) | 80.1(1) | 88.3(1) | 83.0(1) | 85.9(1) | 66.5(1) | 81.0(1) | 48.7(1) | 87.3(1) |
mpla(A)–mpla(C) | 71.2(1) | 77.7(1) | 86.2(1) | 74.2(1) | 71.2(1) | 70.8(1) | 80.9(1) | 74.2(1) | 84.6(1) | 61.4(1) | 65.0(1) | 74.2(1) |
mpla(B)–mpla(C) | 87.2(1) | 82.3(1) | 87.5(1) | 84.6(1) | 89.4(1) | 83.3(1) | 89.7(1) | 64.0(1) | 75.1(1) | 70.1(1) | 53.8(1) | 53.8(1) |
mpla(C)–mpla(D) | 30.0(1) | 44.6(1) | 37.2(1) | 22.90(1) | 35.5(1) | 28.0(1) | 4.0(1) | |||||
Torsion angles | ||||||||||||
C(1)–C(19)–O(1)–H(1) | −82.3(1) | 78.8(1) | ||||||||||
C(14)–C(13)–O(1)–H(1) | −70.2(1) | −80.5(1) | −75.5(1) | −72.0(1) | −82.3(1) | −67.0(1) | −82.2(1) | |||||
C(1)–C(19)–O(1)–C(20) | −75.7(1) | |||||||||||
C(1)–C(19)–N(1)–H(1A) | 166.3(1) | −53.0(1) | ||||||||||
C(1)–C(19)–N(1)–H(1B) | 53.0(1) | −165.3(1) |
Atoms involved | Symmetry | Distance/Å | Angle/° | ||
---|---|---|---|---|---|
D–H⋯A | D–H | D⋯A | H⋯A | D–H⋯A | |
C–Br⋯Br | C–Br | C⋯Br | Br⋯Br | C–Br⋯Br | |
a Means centre of the aromatic ring. 1: Ring CA: C(13A)⋯C(18A). 2: Ring B: C(7)⋯C(12); ring C: C(14)⋯C(19); ring BA: C(7A)⋯C(12A); ring CC: C(14C)⋯C(19C); ring BD: C(7D)⋯C(12D); ring AE: C(1E)⋯C(6E). 3, 4: Ring A: C(1)⋯C(6); ring B: C(7)⋯C(12); ring AA: C(1A)⋯C(6A); ring CA: C(13A)⋯C(18A). b To achieve reasonable hydrogen bond geometries, individual atoms instead of ring centroids were choosen as acceptors. | |||||
1 | |||||
O(1)–H(1)⋯C(14A)b | 1 − x, 1 − y, 2 − z | 0.83(1) | 3.428(2) | 2.670(2) | 153.2(2) |
O(1A)–H(1A)⋯C(12)b | −x, 1 − y, 2 − z | 0.83(1) | 3.230(2) | 2.492(2) | 148.5(2) |
C(8)–H(8)⋯O(1) | x, y, z | 0.95 | 2.689(2) | 2.34 | 101 |
C(18A)–H(18A)⋯O(1A) | x, y, z | 0.95 | 2.660(2) | 2.30 | 102 |
C(5)–H(5)⋯O(1A) | x, y, z | 0.95 | 3.669(2) | 2.75 | 164 |
C(3A)–H(3A)⋯O(1) | x, 1 + y, z | 0.95 | 3.674(2) | 2.78 | 157 |
C(14)–H(14)⋯centroid(CA)a | 1 − x, 1 − y, 2 − z | 0.95 | 3.544(3) | 2.86 | 130 |
C(15)–H(15)⋯C(6)b | 1 − x, 1 − y, 2 − z | 0.95 | 3.639(2) | 2.73 | 160 |
C(6A)–H(6A)⋯C(16)b | 1 − x, 1 − y, 2 − z | 0.95 | 3.590(2) | 2.86 | 135 |
C(9A)–H(9A)⋯C(18)b | −x, 0.5 + y, 1.5 − z | 0.95 | 3.600(2) | 2.88 | 133 |
C(11A)–H(11A)⋯C(3A)b | −x, 2 − y, 2 − z | 0.95 | 3.634(2) | 2.78 | 150 |
C(4)–Br(1)⋯Br(1A) | 1 − x, −0.5 + y, 2.5 − z | 1.898(2) | 4.245(2) | 3.869(2) | 87.9(2) |
C(4A)–Br(1A)⋯Br(1) | 1 − x, 0.5 + y, 2.5 − z | 1.902(2) | 5.613(2) | 3.869(2) | 151.4(2) |
2B | |||||
O(1)–H(1)⋯O(1B) | x, y, −1 + z | 0.84 | 2.929(2) | 2.17 | 151 |
O(1A)–H(1A)⋯O(1) | x, y, z | 0.84 | 2.737(2) | 2.02 | 143 |
O(1B)–H(1B)⋯O(1A) | x, y, 1 + z | 0.84 | 2.790(2) | 2.09 | 141 |
O(1C)–H(1C)⋯O(1D) | x, y, z | 0.84 | 2.743(2) | 1.99 | 150 |
O(1D)–H(1D)⋯O(1E) | x, y, z | 0.84 | 2.735(2) | 2.00 | 147 |
O(1E)–H(1E)⋯O(1C) | x, y, z | 0.84 | 2.741(2) | 1.96 | 155 |
C(3)–H(3)⋯centroid(BA)a | 1 − x, −y, −z | 0.95 | 3.639(3) | 2.70 | 172 |
C(8)–H(8)⋯C(22E)b | 1 − x, −y, 1 − z | 0.95 | 3.678(3) | 2.86 | 145 |
C(23)–H(23)⋯C(5B)b | 1 − x, 1 − y, 1 − z | 0.95 | 3.553(3) | 2.85 | 132 |
C(5A)–H(5A)⋯C(5B)b | 1 − x, −y, 1 − z | 0.95 | 3.592(3) | 2.82 | 139 |
C(10A)–H(10A)⋯C(22C)b | 2 − x, −y, −z | 0.95 | 3.595(3) | 2.84 | 137 |
C(22A)–H(22A)⋯centroid(CC)a | x, y, z | 0.95 | 3.663(3) | 2.76 | 160 |
C(3B)–H(3B)⋯C(4)b | x, y, 1 + z | 0.95 | 3.565(3) | 2.72 | 149 |
C(4B)–H(4B)⋯C(24A)b | −1 + x, y, 1 + z | 0.95 | 3.683(3) | 2.89 | 142 |
C(9B)–H(9B)⋯centroid(B)a | 1 − x, −y, 1 − z | 0.95 | 3.663(3) | 2.76 | 160 |
C(15B)–H(15B)⋯O(1A) | x, y, 1 + z | 0.95 | 3.532(3) | 2.62 | 161 |
C(12C)–H(12C)⋯O(1C) | x, y, z | 0.95 | 2.724(2) | 2.39 | 101 |
C(5C)–H(5C)⋯centroid(AE)a | 2 − x, 1 − y, 1 − z | 0.95 | 3.456(3) | 2.72 | 134 |
C(8C)–H(8C)⋯C(22B)b | 2 − x, 1 − y, 1 − z | 0.95 | 3.633(3) | 2.85 | 141 |
C(24C)–H(24C)⋯C(18)b | x, y, z | 0.95 | 3.570(3) | 2.81 | 138 |
C(2D)–H(2D)⋯C(9D)b | 1 − x, 1 − y, 1 − z | 0.95 | 3.682(3) | 2.86 | 146 |
C(5D)–H(5D)⋯C(10C)b | 2 − x, 1 − y, 1 − z | 0.95 | 3.535(3) | 2.71 | 146 |
C(8D)–H(8D)⋯C(18D)b | 1 − x, 1 − y, 1 − z | 0.95 | 3.563(3) | 2.75 | 145 |
C(19D)–H(19D)⋯C(3D)b | 1 − x, 1 − y, 1 − z | 0.95 | 3.673(3) | 2.90 | 139 |
C(21D)–H(21D)⋯C(25E)b | x, y, z | 0.95 | 3.632(3) | 2.83 | 143 |
C(2E)–H(2E)⋯O(1E) | x, y, z | 0.95 | 2.712(2) | 2.37 | 101 |
C(2E)–H(2E)⋯C(6D)b | x, y, z | 0.95 | 3.671(3) | 2.78 | 157 |
C(4E)–H(4E)⋯C(16B)b | x, y, z | 0.95 | 3.669(3) | 2.84 | 146 |
C(9E)–H(9E)⋯centroid(BD)a | 2 − x, 1 − y, 1 − z | 0.95 | 3.482(3) | 2.75 | 134 |
C(24E)–H(24E)⋯C(22C)b | x, y, z | 0.95 | 3.660(3) | 2.82 | 148 |
2C | |||||
O(1)–H(1)⋯C(11)b | x, −1 + y, z | 0.85(2) | 3.398(2) | 2.62(10) | 153(2) |
C(6)–H(6)⋯O(1) | x, 1 + y, z | 0.95 | 3.371(2) | 2.53 | 148 |
C(15)–H(15)⋯O(1) | x, y, z | 0.84 | 2.805(2) | 2.47 | 101 |
C(4)–H(4)⋯centroid(C)a | −1 + x, y, z | 0.95 | 3.704(2) | 2.92 | 140 |
C(9)–H(9)⋯C(1)b | −x, 0.5 + y, 1 − z | 0.95 | 3.619(2) | 2.77 | 149 |
C(11)–H(11)⋯C(10)b | 1 − x, 0.5 + y, 1 − z | 0.95 | 3.725(2) | 2.89 | 147 |
3 | |||||
C(8)–H(8)⋯C(15)b | 1 − x, 2 − y, −z | 0.95 | 3.705(3) | 2.85 | 150 |
C(16)–H(16)⋯centroid(B)a | 0.5 − x, 0.5 + y, −0.5 + z | 0.95 | 3.594(3) | 2.75 | 149 |
4 | |||||
N(1)–H(1A)⋯centroid(AA)a | −x, 1 − y, 2 − z | 0.89(1) | 3.518(3) | 2.682(2) | 157(2) |
N(1)–H(2A)⋯C(14A)b | −x, 1 − y, 2 − z | 0.89(1) | 3.363(3) | 2.582(2) | 148(2) |
N(1A)–H(1AA)⋯C(8)b | 1 − x, 1 − y, 2 − z | 0.88(1) | 3.579(3) | 2.799(2) | 148(2) |
N(1A)–H(1AB)⋯centroid(A)a | 1 − x, 1 − y, 2 − z | 0.89(1) | 3.649(3) | 2.826(2) | 156 |
C(6)–H(6)⋯N(1) | x, y, z | 0.95 | 2.785(3) | 2.45 | 101 |
C(12)–H(12)⋯N(1) | x, y, z | 0.95 | 2.741(3) | 2.35 | 104 |
C(2A)–H(2AA)⋯N(1A) | x, y, z | 0.95 | 2.799(3) | 2.47 | 100 |
C(18A)–H(18A)⋯N(1A) | x, y, z | 0.95 | 2.773(3) | 2.40 | 103 |
C(14)–H(14)⋯C(15A)b | −x, −0.5 + y, 1.5 − z | 0.95 | 3.650(3) | 2.86 | 141 |
C(17)–H(17)⋯C(3)b | −x, 1 − y, 2 − z | 0.95 | 3.637(3) | 2.79 | 149 |
C(18)–H(18)⋯centroid(CA)a | −x, 1 − y, 2 − z | 0.95 | 3.698(3) | 2.95 | 136 |
C(9A)–H(9A)⋯C(6A)b | 1 − x, 2 − y, 2 − z | 0.95 | 3.618(3) | 2.70 | 163 |
C(4)–Br(1)⋯Br(1A) | 1 − x, −0.5 + y, 2.5 − z | 1.901(2) | 5.622(3) | 3.856(2) | 153.5(2) |
C(4A)–Br(1A)⋯Br(1) | 1 − x, 0.5 + y, 2.5 − z | 1.900(2) | 4.251(3) | 3.856(2) | 88.4(2) |
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Fig. 4 Packing diagram of 2B. The hydrogen atoms of the aromatic units are omitted for clarity. The oxygens are displayed as dotted circles. Broken lines represent hydrogen bond type interactions. |
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Fig. 5 Packing diagram of 2C. The oxygen atoms are displayed as dotted circles. Broken lines represent C–H⋯O hydrogen bonds, broken double lines O/C–H⋯π type interactions. |
Crystallization of the bromo substituted triarylmethanol 1 from a solvent mixture of n-hexane and diethyl ether (9:
1) yields colorless plates of the monoclinic space group P21/c with two crystallographically independent molecules in the asymmetric unit. The perspective view of the molecular structure is presented in Fig. 2a. The unsubstituted arene rings of the molecules are arranged nearly orthogonal to one another showing interplanar angles of 87.2(1) and 82.3(1)°, respectively. The conformation of the molecule is stabilized by a relatively short intramolecular C–H⋯O interaction10 [d(H⋯C) 2.34, 2.30 Å]. Contrary to expectations, the crystal structure lacks conventional hydrogen bonding.13 Instead, the hydroxy hydrogen of the molecules is used for the formation of a O–H⋯π contact10 to the bromophenyl ring of an adjacent molecule [O–H⋯C(arene) 2.64 Å, 156.0°; 2.46 Å, 153.6°] resulting in the creation of supramolecular strands, the structure of which is shown in Fig. 3. Interstrand association is accomplished by a close network of weak C–H⋯π contacts28,29 [d(H⋯C(aryl)) 2.73–2.88 Å] and C–Br⋯Br–C interactions of the type II geometry30,31 (θ1 = 151.4°, θ2 = 87.9°).
Crystallization of the biphenyl containing alcohol 2 from CHCl3 yields colorless crystals of the space group P with the asymmetric part of the unit cell comprising six independent molecules (Z = 12, Z′ = 6). Crystal structures featuring large values of Z′, particularly in connection with polymorphism, have received increasing interest in the last years being discussed in a topical review article.32 In the present structure, the molecules are assembled to form two trimers (Fig. 2b), each of them held together by a cyclic array of O–H⋯O hydrogen bonds [d(O⋯O) 2.735(3)–2.928(3) Å] and weak C–H⋯O [d(H⋯O) 2.37–2.38 Å] as well as C–H⋯π contacts [d(H⋯C) 2.72–2.84 Å]. The conformation of a trimer is such that its molecules are oriented in one direction with a nearly parallel alignment of their biphenyl axes. As is evident from geometric parameters (Table 2), the conformations of the molecules significantly deviate, which in particular can be seen from tilt angles between aromatic rings of the biphenyl units ranging from 22.9(1) to 44.6(1)° (Sup 1). It should be noted at this point that a known crystal structure of 2 (2A) reported by Ferguson et al.33 exists in the non-centrosymmetric orthorhombic space group P212121 (Z = 4, Z′ = 1), so that the present crystal structure represents a second polymorph (2B) of this compound. The difference in space group symmetries of the polymorphs suggests fundamental differences regarding the packing structures and modes of molecular association. In the present crystal structure, the molecules of adjacent trimers adopt an antiparallel arrangement (Fig. 4) thus allowing close packing and formation of multiple C–H⋯π-interactions. Nevertheless, the crystal of 2B contains solvent accessible lattice voids with a volume of 81.2 Å3 per unit cell (~1.5% of the cell volume). By way of contrast, neither conventional intramolecular nor intermolecular hydrogen bonds are observed in the previously reported structure of 2A.33 The crystal of this polymorph is composed of isolated molecules with only weak C–H⋯π contacts [d(H⋯C) 2.80–2.92 Å] acting between them to form molecular strings.
In the course of our crystal growing experiments we noticed that crystals of 2 obtained from diethyl ether existing in the monoclinic space group P21 with one molecule in the asymmetric unit represent another new polymorph 2C (Fig. 2c). The twist angle between the aromatic rings of the biphenyl element is 4.0(1)°. Remarkably, the packing of molecules as well as the pattern of intermolecular non-covalent bonding of this polymorph are also fundamentally different from that of the aforementioned structures of 2A and 2B. As illustrated in Fig. 5, the crystal is constructed of supramolecular strands running along the b-axis. Within a given strand, the molecules are connected by C–H⋯O hydrogen bonding [d(H⋯C) 2.53 Å]. The hydroxy hydrogen of the molecule participates in O–H⋯π hydrogen bond formation [d(H⋯π) 2.62(1) Å, ∠O–H⋯π 153(2)°] between the molecules of adjacent strands. Interstand association is completed by weak C–H⋯π contacts [d(H⋯π) 2.77–2.92 Å, ∠C–H⋯π 140–149°].
Crystallization of the methyl ether derivative of 1, that is 3, from methanol yields colorless rods of the orthorhombic space group Pna21 with one molecule in the asymmetric part of the unit cell (Fig. 6a). The pair of phenyl rings are oriented at 70.1(1)° to one another, while these rings are inclined at angles of 81.0(1) and 61.4(1)° with respect to the plane of the bromophenyl ring. As the molecule 3 lacks a strong hydrogen donor, the crystal structure is characterized by poor molecular association. A view of the packing structure along the crystallographic c-axis (Fig. 7) reveals that neither the ether oxygen nor the bromine atoms participate in molecular cross-linking, Hence, interactions between the molecules are restricted to weak C–H⋯π contacts only.
The compound 4, being the amine analogue of 1, crystallizes from n-hexane as colorless plates of the monoclinic space group P21/c with two independent molecules in the asymmetric unit (Fig. 6b). The molecules markedly deviate in their conformations as can be seen from the dihedral angles of 53.8(1) and 70.7(1)° formed between the unsubstituted aromatic rings. The bond lengths C(aryl)–C(sp3) and C–N are 1.537(2)–1.542(2) and 1.479(2)/1.484(2) Å and agree well with those found in the crystal structures of the polymorphic forms of plain triphenylmethylamine.22–24 The coordination behavior of the amine 4 resembles that of the alcohol 1, i.e. the strong hydrogen donors are involved in weak N–H⋯π contacts [d(H⋯π) 2.62–2.83 Å] giving rise to the formation of supramolecular strands (Fig. 8). Owing to the similarity of cell parameters between 1 and 4 the packing of molecules in the respective crystal structures is essentially of the same kind. More strictly speaking, in 4 one of the unsubstituted arene rings and the bromophenyl ring of each molecule act as acceptors for hydrogen bonding. Interstrand association is realized by C–Br⋯Br–C contacts of type-II geometry [θ1 = 153.5°; C(7)–Br(1)⋯Br(2) θ2 = 91.0°] and arene–arene interactions [C–H⋯π 2.70–2.86 Å, 141–163°].
For the structure 1, there are two crystallographically independent molecules in the asymmetric part of the unit cell. Thus, we have produced two fingerprint plots for the molecules (labelled as 1 and 2 in Fig. 9) which are very similar. Due to the high content of hydrogen atoms in the crystal structure, the 2D-fingerprint plots are dominated by H⋯H interactions comprising 58.4 and 56.6% of the surface, respectively (peak 1). Peak 2 represents C⋯H interactions (including C–H⋯π and O–H⋯π contacts) which comprise 38.0 and 40.7% of the surface. Br⋯H interactions (de + di ≈ 3.0 Å, peak 3) make up 17.2 and 14.1% of the Hirshfeld surface. The bright streak along the diagonal (de = di ≈ 1.9 Å) indicate the presence of weak Br⋯Br contacts. The sum (de + di) = 2.30 Å for H⋯H interactions as well as the diffuse pattern of points at the upper right region of the plots (de ≈ 2.6, di ≈ 2.75 Å) indicate that the packing is moderately efficient. The lattice energy calculated for 1 is −133.9 kJ mol−1.
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Fig. 9 2D-fingerprint plots for the molecules 1 and 2 in the asymmetric unit of compound 1. Spikes labelled as 1–3 correspond to H⋯H, C⋯H and Br⋯H interactions, respectively. |
Polymorph 2A, derived from the CSD (Refcode YUHGOX), and polymorph 2C crystallize with one molecule in the asymmetric unit of the cell. Their 2D-fingerprint plots (Fig. 10) exhibit similarities which are reflected by nearly identical values for the different kinds of interactions, in which H⋯H contacts make up 58.4/56.6%, C⋯H interactions 38.0/40.7% and O⋯H interactions 3.1/3.1%. Nevertheless, the plots display differences. The fingerprint plot of 2A reveals a diffuse blue tail of points at the upper right (di = 2.4–2.8 Å), which indicates a non-optimal packing of molecules. The plot of polymorph 2C is characterized by two sharp features (de + di = 2.5 Å) which, apart from CH⋯π bonding, represent O–H⋯π contacts, the latter being absent in polymorph 2A. The structural similarities of the polymorphs are reflected by nearly identical lattice energies of −165.5 (2A) and −169.9 kJ mol−1 (2C).
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Fig. 10 2D-fingerprint plots for the molecules 2 in the polymorphs 2A and 2C. Spikes labelled as 1 and 2 correspond to H⋯H and C⋯H interactions, respectively. |
The polymorph 2B refers to the structure with Z′ = 6. We therefore computed Hirshfeld surfaces choosing each individual molecule in turn as a target and obtained six distinct fingerprint plots (Fig. 11). Each fingerprint plot displays three characteristic patterns labelled 1–3 for molecule 3. The plots are similar in that they all indicate a large proportion for H⋯H interactions varying from 57.0 to 63.6%, followed by C⋯H interactions (32.2–39.1%) and O–H⋯O hydrogen bonds (2.8–3.4%), the latter appearing as a pair of spikes, the upper left (de > di) corresponding with the hydrogen bond donor, the lower one (de < di) with the hydrogen bond acceptor. The values for de + di are in the range between 1.95 and 2.15 Å. Peak 1 of the plots represents H⋯H interactions with some of them showing anomalous short distances near 2.0 Å which suggests a tight packing of molecules. Compared with 2A and 2C, the increased content of H⋯H interactions which is accompanied by a decrease of C⋯H interactions may be attributed to completely different packing modes which in 2B includes compact trimers of O–H⋯O bonded molecules. Obviously, the unique alignment of the biphenyl parts within the trimers enhances the degree of C–H⋯π interactions. They are visible in the 2D-fingerprint plots as “wings” (peak 2). It should be noted here, that O–H⋯O hydrogen bonds have a structure directing effect, although they represent only a small proportion of the Hirshfeld surfaces. Furthermore, we see in some of the fingerprint plots (molecules 1–3) a rather diffuse collection of points at larger values for de and di, indicating that parts of the Hirshfeld surface of the molecules are without close contacts indicating the presence of voids in the crystal lattice. Unfortunately, we could not compute the lattice energy for polymorph 2B, because the number of atoms exceeded the limit allowed by the program OPIX (Gavezotti).37
The structure 3 bears resemblance to the structure of 1 in that the only strong features are H⋯H (52.8%) and C⋯H contacts (24.9%). The fingerprint plot of the molecule (Fig. 12) is characterized by two “wings” (de + di ≈ 2.7 Å) which can be ascribed to C–H⋯π interactions. The lattice energy is computed to −130.1 kJ mol−1.
The 2D-fingerprint plots for the two independent molecules of the amine 4 (Z′ = 2) (Fig. 13) show proportions of 51.4 and 46.6% for H⋯H interactions. C⋯H represent 31.5 and 33.3% of the Hirshfeld surface, respectively. The C–H⋯π and N–H⋯π interactions in the crystal structure appear as distinct “wings” at the upper left and lower right region of the plot. The Br⋯H interactions also have a relatively significant contribution to the total Hirshfeld surfaces comprising 14.3 and 17.0%, respectively. Similar to the crystal structure of 1, Br⋯Br contacts are clearly visible as a bright streak (de = di ≈ 1.9 Å). The lattice energy of the structure amounts to −137.0 kJ mol−1.
It stands to reason that the methyl ether analogous compound 3 can not form corresponding OH involved interactions. However, Hal⋯Hal contacts typical of 1 are also absent in 3 while only weak C–H⋯π interactions, comparable to 2A determine the crystal structure. Two polymorphic crystal structures are also known for the parent compound of 4, i.e. the unsubstituted triphenylmethylamine. One is composed of N–H⋯N bonded molecular dimers with the amino hydrogens disordered over two positions23,24 whereas in the other polymorph, molecules are interlinked by weak N–H⋯π contacts to 2D supramolecular aggregates.15 On the other side, a molecular organization analogous to that of 1 is found in the crystal structure of the corresponding amine 4 with both amino hydrogens being involved in chain formation via N–H⋯π interaction. So, following the relation of O–H⋯O to O–H⋯π interactions in the tritylalcohols, interchangeability of N–H⋯N for N–H⋯π contacts, according to substitution and polymorphism obviously is also a characteristic feature in the crystal formation of the tritylamines.
In summary, the impression is given that compounds involving both trityl alcohols and amines rather sensitively respond to substitution or change of substituent as well as the solvent used for crystallization in the formation of an appropriate crystal structure. Therefore, to exert control on a desired crystal structure including examples of these compound classes is not without its problems. Nevertheless, deduced from the given discussion certain trends in forming cluster aggregates via strong hydrogen bonding or non-cluster type structures being founded on weak hydrogen bond type and related interactions can be read from the comments of this paper that could be supportive for purposes of crystal engineering in the field.
Footnote |
† CCDC 1062479–1062483. Overlay scheme of molecular conformation (Sup 1) and crystallographic data. For crystallographic data in CIF or other electronic format see DOI: 10.1039/c5ce00871a |
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