German
Sastre
*a,
Johan
van den Bergh
b,
Freek
Kapteijn
b,
Dmytro
Denysenko
c and
Dirk
Volkmer
*c
aInstituto de Tecnologia Quimica UPV-CSIC, Universidad Politecnica de Valencia, 46022 Valencia, Spain. E-mail: gsastre@itq.upv.es
bChemical Engineering Department, Delft University of Technology, Julianalaan 136, 2628 BL Delft, The Netherlands
cChair of Solid State and Materials Chemistry, Institute of Physics, Augsburg University, Universitaetsstrasse 1, D-86159 Augsburg, Germany. E-mail: dirk.volkmer@physik.uni-augsburg.de
First published on 16th May 2014
The metal–organic framework MFU-4 shows preferential adsorption of CO2 over N2. This cannot be explained in terms of pore size only. Computational modelling suggests that the unique structure and flexibility of its small 8Cl-cube pore shows a unique gate-diffusion behaviour with different responses to CO2 and N2.
Breathing MOFs are an extreme case where the entire structure responds to the adsorbate by changing space group and unit cell volume. This has been found in layered MOFs,4 DUT-82 and notably in MIL-53.3,5 Less flexible MOFs can also show gate-driven adsorption such as ZIF-7,6,7 where the gate opening (closure) is triggered by a benzene ring rotation activated at different pressures depending on the adsorbate.
Here we focus on MFU-48 (Fig. 1), which belongs to this latter category of less flexible MOFs, as it contains a robust framework, thermally stable up to 350 °C, and resistant to air and water, owing to its strong Zn–N bonds. The structure comprises ‘Kuratowski units’ with Zn found in octahedral (1 atom) and tetrahedral coordination (4 atoms), as can be seen in Fig. 1. The linker is benzo(1,2-d:4,5-d)-bistriazolate, bonded to the octahedral Zn through the central nitrogen of the N–N–N moiety within the triazolate ring, and to the tetrahedral Zn through the other nitrogens. Each Kuratowski unit contains 1 central octahedral Zn and 4 peripheral tetrahedral Zn ions. Each tetrahedral Zn is bonded to 3 N donors and one chloride ligand. Upon cross-linking of these secondary building units (Fig. 1) in a linear fashion, the metal–organic framework MFU-4, in the space group Fmm, is formed.
In this study we report selective adsorption of CO2 over N2 in MFU-4 and we unveil the mechanism for this selectivity. There is an industrial interest in this separation process for CO2 sequestration or removal from flue gas.9,10 CO2 and N2 have a fairly similar size, 3.30 and 3.64 Å respectively, using the kinetic spherical diameters or, with elliptical shapes, 5.40 × 3.30 and 4.2 × 3.64 Å respectively, according to Ma and Balbuena.11 Based on rigid cylinder-like pores, Ma and Balbuena predict the CO2/N2 selectivity as a function of the cylinder cross sectional area. CO2 selectivity is found for pores <4.75 Å, while a slight N2 selectivity (1.0–1.2) appears at larger pores. MFU-4 does not contain a cylindrical pore, but still these results indicate a threshold window size (<4.75 Å) for selectivity of CO2 over N2. The size of the small pore of MFU-4 (ca. 4.1 Å) suggests that MFU-4 could be, in principle, a good material to test in CO2|N2 separations.
![]() | ||
Fig. 2 Small pore of MFU-4 formed by 8 Cl atoms (highlighted) in a cubic-like geometry. Each of the 6 faces (formed by a square of 4 Cl atoms) of this cube, called ‘8Cl-cube’, connects this small pore (‘A’ in Fig. 1) with a large pore (‘B’ in Fig. 1). Atom colors: C gray, N blue, Cl green, tetrahedral Zn red, octahedral Zn dark blue, H white. |
Diffusion across MFU-4 requires to cross the small pores which act as bottlenecks. Small pores are made of 8 chloride anions in a cubic arrangement with adjacent chloride anions approaching each other at van der Waals distances of 4.1 Å, within the range for preferential diffusion of CO2 over N2. Chloride ligands are linked to tetrahedrally coordinated Zn, and the considerable flexibility of the N–Zn–Cl angle leads to a large variability of the Cl positions and hence a very flexible small pore.
This linearity is attractive for pressure swing adsorption (PSA) applications, and indicates that CO2 adsorption is still far from saturation. No hysteresis was observed in the desorption, demonstrating that equilibrium was obtained. The N2 uptake at 298 K is quite low, pointing to strong diffusion hindrance in MFU-4. This is illustrated by transient uptake profiles of CO2 and N2 at 195 and 298 K upon exposure to a pressure step (Fig. 4). The data shows that a small amount of N2 adsorbs quite fast (∼1 min) and then saturation is reached. Lower uptakes of N2 with respect to CO2 can be related to diffusion limitations.
Taking into account that a model using a single particle size does not explain the experimental uptakes, contributions of different particle sizes were included in the model using SEM data which revealed particles sizes between 0.6 and 20 μm. This analysis was used to calculate the apparent diffusivities for the two gases at 195 and 298 K. From these results, apparent activation energies were calculated with values 6.9 kJ mol−1 (for CO2) and 18.5 kJ mol−1 (for N2).
MFU-4 and MFU-4l,12 having similar structure but larger pores, have been used as a model substrate for the determination of isosteric heats of adsorption. The heats of CO2 and N2 adsorption are 24.4 and 14.7 kJ mol−1 at zero coverage, and its variation with coverage was also obtained (Fig. 5). More details can be found as ESI† (sections §4 and §5).
First, quantum chemistry DFT energy minimisation methods have been used in order to calculate the energetic, including transition states, of the diffusion of CO2 and N2 through the small pore of MFU-4. Second, using a new set of DFT calculations, a new force field has been parameterised using the DFT energetics for fitting. This includes the energetics of the small cage at different conformations of the 8Cl-cube, as well as the interactions of the two adsorbates (N2 and CO2) with this small cage. With the new force field, molecular dynamics (MD) have been performed in order to reproduce loading and thermochemical behaviour of the real system considering explicitly full flexibility for all the atoms of the system.13 Full details are included in the ESI† (sections §1–§3).
A cluster of MFU-4 (Fig. 6) was considered in order to calculate the energies of CO2 and N2 in specific locations near the small pore.
Gaussian0914 software and DFT methods have been used throughout. Functional CAM-B3LYP was chosen due to its capability to account for long-range corrections introduced in the functional through the Coulomb-attenuating method. Along the same lines, large basis sets are required in order to capture the physics of the long range interactions. Due to the large size of the system, we opted by using the Def2-QZVP basis set only for the diffusing molecule (either N2 or CO2) and also the atoms located in the neighbourhood of the diffusing molecule, which means the 8 Cl atoms as well as those Zn and H atoms located nearby. All the other atoms were kept fixed and were described with 3-21G basis set. The few degrees of freedom imply that the energies of the diffusion paths (Fig. 6) can only be taken qualitatively. Including the diffusing molecule, this gives 1873 basis functions (cluster-MFU-4 + N2) and 1894 basis functions (cluster-MFU-4 + CO2).
The diffusion pathways have been calculated, and they give a different behaviour for each molecule. For CO2 and N2, crossing the 8Cl-cube following the path 1–2–3–2′–1′ (see Fig. 6) is possible, with the respective barriers calculated at CAM-B3LYP/Def2-QZVP level being ca. 24 and 34 kJ mol−1 for CO2 and N2 (Fig. S1–S3 in ESI†). Importantly, a second mechanism for diffusion occurs only for CO2, where hopping is observed between two contiguous 4Cl-faces (path 1–2–4–2′–1′ in Fig. 6), with an activation energy of 8.8 kJ mol−1. With each face of the 8Cl-cube (small pore) connected to a different large cavity, this is a large→small→large hopping. The calculated activation energies, 8.8 and 33.6 kJ mol−1, compare qualitatively with the experimentally obtained 6.9 and 18.5 kJ mol−1 for CO2 and N2 respectively.
However, the relative energies of the different conformations of Cl atoms in MFU-4, were not well reproduced by this force field according to first-principles results based on cluster calculations using TZVP16 basis set and different DFT functionals containing dispersion corrections17 (ωB97XD,18 B97-D3,19 M06X-D3,20 CAM-B3LYP-D321 and B2PLYP-D22). Equally, UFF could not reproduce either of the adsorbate-MFU-4 interactions for CO2 and N2, as compared to the first-principles results. Attempts to use other force fields also failed. Hence, using first-principles data, some of the energetic terms of the UFF were reparameterised.
Regarding the relative energies of the different conformations of Cl atoms in MFU-4, they are not well reproduced by UFF. This has been found by comparing the relative energies of different geometries as calculated with UFF and with several DFT-D (where -D stands for dispersion-corrected) functionals using TZVP basis set. In order to try to stick as much as possible to previously existing force fields, we have made a thorough literature review of epsilon and sigma parameters for Cl and H, with the results shown in Fig. S6 and S7,† implying the use of the following force fields: Kamath et al.,23 UFF,15 Dietz and Heinzinger,24 Kovacs et al.,25 Lopes et al.,26 Harnes et al.,27 reaxFF,28 Liu et al.,29 Bureekaew et al.,30 and Torres et al.31
Being the energetics of the flexibility of the small pore a central point which is directly related to the diffusivity of any adsorbate through MFU-4, a modification of UFF is mandatory to describe more correctly the flexibility of MFU-4, and this has been done in the present study. Using cluster-based quantum-chemistry DFT-D data, two steps have been followed in the parameterisation:
Step-1. First, without considering the adsorbate molecules, five parameters were found crucial to mimic the flexibility of the MFU-4 structure: the Lennard-Jones terms for Cl and H atoms (epsilon, sigma for H and Cl, eqn (1)), and the three-body term regarding the floppiness of the Cl–Zn–N angle in MFU-4 (kClZnN, eqn (2)).
![]() | (1) |
![]() | (2) |
For this task, a smaller cluster of MFU-4 has been fully optimised to its minimum energy conformation using ωB97XD functional and TZVP basis set. Apart from the minimum energy, five additional conformations of the cluster were considered, with the positions of the Cl ligands randomly moved ±0.75 Å from their equilibrium position, keeping the Zn–Cl bond distance fixed. All the other atoms were kept fixed. The corresponding ωB97XD/TZVP energies were calculated and tabulated with respect to the minimum energy conformation. These energies were used as target in order to fit the following parameters of the new forcefield (Table 1).
ε Cl | σ Cl | ε H | σ H | k Cl–Zn–N | |
---|---|---|---|---|---|
new-FF | 0.200 | 3.828 | 0.023 | 1.482 | 18.5 |
UFF | 0.227 | 3.947 | 0.044 | 2.886 | 141.4 |
With this procedure, for the calculation of the new-FF energies, only the Lennard-Jones, bond bending (Cl–Zn–N), dihedral (Cl–Zn–N–N and Cl–Zn–N–C), and electrostatic terms were needed. The atomic charges were obtained from the same DFT calculations using the Mulliken analysis.
Step-2. The previous step concerns internal parameters of the MFU-4. In this step, parameters concerning the interactions MFU-4-adsorbate were obtained.
For this purpose, several configurations corresponding to CO2 and N2 diffusion paths, similar to those previously described in Fig. S1–S4,† have been considered. With each configuration, the interaction energy was calculated as:
Eads=E(MFU-4 adsorbate) − E(MFU-4) − E(adsorbate) | (3) |
Then, the same single point calculations were considered using the new-FF, and in this case, new Lennard-Jones parameters for the adsorbate atoms, C, O, N were found with the condition that the new-FF energy should be as close as possible to the DFT value. Tables 2 and 3 show the improvement with respect to UFF. The atomic charges in the new-FF were obtained from the Mulliken analysis of the DFT results.
ωB97XD/TZVP | new-FF | UFF | |
---|---|---|---|
MFU-4⋯CO2 | −22.3 | −18.0 | −17.4 |
−24.9 | −16.2 | −11.9 | |
−5.8 | −8.2 | −11.6 | |
2.2 | 1.3 | −4.3 | |
11.2 | 13.0 | 4.7 |
ωB97XD/TZVP | new-FF | UFF | |
---|---|---|---|
MFU-4⋯N2 | −13.2 | −9.6 | −9.7 |
7.6 | 4.8 | 0.2 | |
8.5 | 7.6 | 2.6 | |
19.3 | 19.5 | 11.8 | |
32.0 | 35.5 | 24.1 |
These DFT calculations (ωB97XD/TZVP) have allowed to obtain the adsorption energies of CO2 and N2. Using all the adsorbate/MFU-4 geometries employed above and searching the minimum energy using the first-principles methods and geometry optimisation algorithms, the adsorption energies 24.9 and 13.2 kJ mol−1 have been found (Tables 2 and 3), which compare well with the experimental observations for MFU-4 (24.4 and 14.7 kJ mol−1 for CO2 and N2 respectively, Fig. 5).
Hence, the interaction between the adsorbates and the MFU-4 cluster were taken into account in order to reparameterise the Lennard-Jones of the C, O and N atoms in CO2 and N2. The new Lennard-Jones parameters are shown in Table 4.
UFF | New ff | |||
---|---|---|---|---|
ε (kcal mol−1) | σ (Å) | ε (kcal mol−1) | σ (Å) | |
C1 | 0.105 | 3.851 | 0.161 | 3.420 |
O1 | 0.060 | 3.500 | 0.055 | 3.897 |
N1 | 0.069 | 3.660 | 0.059 | 3.860 |
With the new force field, molecular dynamics have been performed within the NVT ensemble for 2 ns with the explicit relaxation of all the atoms of the system using LAMMPS.32 The results give more information than that obtained from the static DFT results. At low (10 molecules per unit cell33) CO2 loading and 298 K (movie 1, see ESI†) no diffusion is observed, and the same is observed for N2, and this is in part due to the presence of minimum energy positions inside the large pore. At higher loading33 and 298 K, a completely different picture appears for CO2 with many large–small–large pore crossings observed (movie 2, see ESI,† and Fig. 7) due to the larger mobility of the molecules, more widespreadly distributed across the pore, spending more time close to the 8Cl-cube (small pore).
Fig. 7 (top) shows a CO2 molecule initially outside the central 8Cl-cube (1st snapshot). Then, the CO2 molecule enters the central 8Cl-cube (2nd and 3rd snapshots) through a large→small pore crossing. Then, the CO2 molecule exits the central 8Cl-cube (4th and 5th snapshots) through a small→large pore crossing, and stays in the large pore (6th snapshot).
CO2, due to its long shape, keeps the gate open while it is inside the deformed 8Cl-cube and this facilitates the way out, which happens in a short period of time, resulting in a fast (43 ps) large→small→large hopping (Fig. 7, bottom).
The specific feature, only present for CO2 adsorbed within MFU-4, which contributes largely to explain the enhanced CO2 mobility, is the fact that increasing loadings result in a larger interaction of CO2 with the tetrahedral Zn atoms, causing a displacement of the Cl from its equilibrium position and opening the gate of the small pore (Fig. 8, left).
For N2 at high loading and 298 K a different picture is observed (movie 3, see ESI†). Very few pore crossings are observed, in agreement with the previous result of a larger activation energy, but most importantly, the molecular dynamics shows that when the N2 molecule enters the small pore, it remains inside (Fig. 8, right) for longer periods of time than the CO2 molecule.
When N2 is inside the 8Cl-cube, all the Cl-gates tend to remain closed because of the shorter length of the molecule (Fig. 9). In fact the position of the N2 molecule inside the small pore is an energy minimum (position ‘3’ in Fig. S1 and S2†), whilst for CO2 it is a maximum (position ‘3’ in Fig. S3 and S4†). This explains the longer time of residence of N2 which contributes to the lower diffusivity with respect to CO2. A schematic picture (Fig. 10) shows how the relative lengths of the adsorbates (CO2 and N2) contribute to leave the gate of the small pore either open (Fig. 10, left; CO2) or closed (Fig. 10, right; N2).
A full analysis of the molecular dynamics trajectories shows that crossing events were only found at the higher loadings sampled, corresponding to 20 molecules (either CO2 or N2) per unit cell (a = 21.697 Å) of MFU-4. In the case of CO2, 11 crossing events were observed, whilst in the case of N2 only 2 occurred. This is also in support of all the previous findings and the smaller diffusivity experimentally observed for N2 (Fig. 3 and 4).
Starting from a CO2 molecule in the external surface of MFU-4, the strong interaction of CO2 with the chlorine ligands leads to frequent events where CO2 ‘pushes’ a Cl-gate and penetrates inside the 8Cl-cube. Due to the comparatively large length of the CO2 molecule with respect to the Cl⋯Cl distance, the Cl-gate remains ‘open’ (Fig. 8, left) while CO2 is inside the 8Cl-cube. This favours a fast migration-out, and hence the CO2 remains comparatively short times inside the 8Cl-cube. On the other hand, when N2 enters the 8Cl-cube, remains inside longer time due to its shorter size. This is because the shorter length of N2 (with respect to CO2) allows the Cl-gate to remain ‘close’ while N2 is inside the 8Cl-cube (Fig. 8, right). This contributes to a stabilisation and ‘gate closure’ while N2 is inside the 8Cl-cube, hence leading to lower diffusivity.
The mechanism for selective adsorption of CO2 over N2 in MFU-4 has been unveiled with the help of computational methods. The consistency of the computational results is provided by the agreement with adsorption experiments, which indicate a clearly preferred adsorption of CO2 over N2. The respective activation energies (from calculations 8.8 and 33.6 kJ mol−1, and from measurements 6.9 and 18.5 kJ mol−1 for CO2 and N2 respectively) indicate a reasonable agreement, although for N2 a certain discrepancy is observed. The adsorption energies (from calculations 24.9 and 13.2 kJ mol−1, and from experiments 24.4 and 14.7 kJ mol−1 for CO2 and N2 respectively) show a remarkable agreement in spite of the approximations made in the computational part. The limitations of the force field and the models employed, as well as the intrinsic difficulty of reproducing the framework-adsorbate and adsorbate–adsorbate dispersion interactions with high accuracy is responsible of a certain discrepancy of the computational results with respect to the experiments, such as the activation energy for the N2 diffusion (calculated as 33.6 and measured as 18.5 kJ mol−1). However, in spite of some discrepancy in the numerical values, we believe the relative features have been well captured and they are sufficient to unveil the mechanisms of diffusion of CO2 and N2 in MFU-4.
From the commercial viewpoint, the current results show that MFU-4 should not be a competitive material for CO2|N2 separations mainly due to the fact that the diffusion is too slow for CO2. Although initially the pore size (ca. 4.1 Å) seems within an optimum range for this separation process and the diffusion of N2 is sufficiently constrained, an appropriate material should show a faster diffusion for CO2. The problem in MFU-4 is that crossing events for CO2 tend to be less frequent than what should be required. Most of the time, CO2 molecules diffuse inside the large pore where a large region of low energy is found, this meaning that jump motions towards the small pore of the appropriate direction and velocity are probabilistically unfavoured. In any case, unveiling the mechanism of selective diffusion can be of help to design similar strategies with other adsorbates and related materials. Further research on this topic will address these issues.
Footnote |
† Electronic supplementary information (ESI) available: Includes movies and full details of the computational models and further experimental results. See DOI: 10.1039/c4dt00365a |
This journal is © The Royal Society of Chemistry 2014 |