Selina Rahman
Shanta‡
a,
Tae Young
Kim‡
ab,
Ji Hye
Hong
a,
Jeong Hwa
Lee
a,
Chan Young
Shin
c,
Kyun-Hwan
Kim
c,
Young Hwan
Kim
d,
Sang Kyung
Kim
e and
Kwang Pyo
Kim
*a
aDepartment of Molecular Biotechnology, WCU program, Konkuk University, Seoul, 143-701, Korea. E-mail: kpkim@konkuk.ac.kr; Fax: +82-2-458-7682
bDepartment of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA
cDepartment of Pharmacology, School of Medicine, Konkuk University, Seoul, 143-701, Korea
dDivision of Mass Spectrometry Research, Korea Basic Science Institute, Graduate School of Analytical Science and Technology, Chungnam National University, Ochang 863–883, Daejeon 305-764, Korea
eCenter for BioMicrosystems, Korea Institute of Science and Technolgy, Seoul, 136-791, Korea
First published on 3rd October 2012
Since the development of matrix-assisted laser desorption/ionization (MALDI) mass spectrometry, this procedure has been specifically used for analyzing proteins or high molecular weight compounds because of the interference of matrix signals in the regions of the low mass range. Recently, scientists have been using a wide range of chemical compounds as matrices that ionize small molecules in a mass spectrometer and overcome the limitations of MALDI mass spectrometry. In this study, we developed a new combination matrix of 3-hydroxycoumarin (3-HC) and 6-aza-2-thiothymine (ATT), which is capable of ionizing small molecules, including drugs and single amino acids. In addition to ionization of small molecules, the combination matrix by itself gives less signals in the low mass region and can be used for performing imaging mass spectrometry (IMS) experiments on tissues, which confirms the vacuum stability of the matrix inside a MALDI chamber. The drug donepezil was mapped in the intact tissue slices of mice simultaneously with a spatial resolution of 150 μm during IMS. IMS analysis clearly showed that intact donepezil was concentrated in the cortical region of the brain at 60 min after oral administration. Our observations and results indicate that the new combination matrix can be used for analyzing small molecules in complex samples using MALDI mass spectrometry.
Selection of the correct matrix, especially for small molecule analysis, is a challenging process. As the low m/z regions of MALDI-IMS gives large interference signals from a large population of matrix-related adduct clusters and endogenous biomolecules from the tissue sample, it is expected to have overlapped signals with the same nominal mass of the target molecule.3 This problem is prominent in low spatial resolution mass spectrometers such as the time-of-flight system. To overcome the problem, several strategies can be attempted including high resolution MALDI-IMS with Fourier transform ion cyclotron (FT-ICR) mass spectrometry,3 the alternative use of a deuterated matrix5 or tandem mass spectrometric analysis (MS/MS) of targeted drug molecules prior to IMS analysis or on tissue MS/MS analysis after IMS.6,7
The use of high resolution mass spectrometers for example FT-ICR or Orbitrap can solve the problem of false-positive identification associated with overlapping peaks.3 Because of their advanced resolving power these MS instruments have the capability of separating target molecules or their metabolites from matrix clusters and endogenous compounds that have similar molecular weight. However as the acquisition time is much slower, it increases the total image acquisition time.8 MS/MS analysis can provide structural information of targeted compounds and can identify the target molecule from other biomolecules with the similar nominal mass. For more accurate and specific MALDI-IMS analysis of the target molecule and its metabolites in tissue, a number of strategies based on MS/MS imaging have been described including selected reaction monitoring (SRM) mode6 and multiple reactions monitoring (MRM) mode.7 In addition, there is a very recent development of MALDI-IMS for the target molecule by reducing interference of the matrix clusters.5 The use of deuterated matrix uncovers the masked signals of the target molecules analyzed with the conventional matrix. Change to the deuterated matrix of the corresponding matrix generates a different set of matrix cluster ions which previously masked the target molecules.
However, selection of an appropriate matrix is critical to ensure successful MALDI-IMS. Using commonly known matrices such as 2,5-dihydroxybenzoic acid (DHB), α-cyano-4-hydroxycinnamic acid (CHCA), 9-aminoacridin (9-AA), and 2-mercaptobenzothiazole (2-MBT) for imaging analysis of small molecules have their own particular difficulties. An appropriate matrix has at least 2 major requirements: (1) ensuring a reduced background signal to facilitate identification of analyte peaks from the target samples and (2) sustaining the stability of analyte peaks under vacuum conditions during data acquisition. Therefore, it is essential to develop a matrix that has little noise in the low molecular weight region and is stable in vacuum for successful analysis of small molecules using MALDI-MS and MALDI-IMS.
Thus, binary or so-called combination matrices have recently been suggested to improve matrix efficiency and obtain a good mass spectrum of diverse molecules. For example, a binary matrix of 2,5-DHB and 2-hydroxy-5-methoxybenzoic acid (super DHB) improves the resolution of mass spectra of carbohydrates and glycoproteins.9 Another binary matrix of CHCA and 2,5-DHB is used in MALDI-MS for peptide mass mapping and analysis of intact glycoproteins and phospholipids because this matrix provides improved mass spectra.10,11 In these cases, the efforts were focused on improving the quality of mass spectra of proteins, protein–carbohydrate complexes, or lipids, which have molecular weight >500 Da. The binary matrix of CHCA–9-AA effectively reduced noisy peaks in the low molecular weight region.12 However, the binary matrix of CHCA–9-AA was only applicable to analytes with pKa values substantially different from those of matrices. Moreover, the abovementioned binary matrices have not been used for IMS of small molecules directly on real tissue samples. One recent successful report on small molecule identification was stated by Chen et al., where a new matrix N-(1-naphthyl) ethylenediamine dihydrochloride (NEDC) has been applied on rat brain tissue to detect glucose level.13
Analysis of small molecules especially different types of drugs using MALDI-IMS has been a major focus of the pharmaceutical industries because MALDI-IMS provides a fast and authentic proof of drug distribution in target organs compared to traditional imaging methods such as magnetic resonance imaging, autoradiography, or fluorescence microscopy. MALDI-IMS analyses provide drug distribution data in the target organ without extra labeling processes and identify unexpected toxicity of the parent drug or its metabolites to non-target organs.8 MALDI-IMS can simultaneously distinguish distribution of targeted drugs and their metabolites even in more complex tissue structures for example brain, which is not possible with other traditional imaging techniques. For the successful analysis of MALDI-IMS, at present the major concern of researchers is the choice of suitable matrices. To achieve this goal, this study aimed to develop a new matrix that can overcome the problems in analyzing small molecules mainly drugs directly on tissue.
In this study, we present a new combination matrix of 3-hydroxycoumarin (3-HC)14 and 6-aza-2-thiothymine (ATT)15 that is effective in identifying and imaging small biomolecules, including drugs (gefitinib, m/z 447 and donepezil, m/z 380) and amino acids (alanine, m/z 89, threonine, m/z 119, methionine, m/z 149, and tryptophan, m/z 204). All these amino acids and drugs have low molecular weights and are difficult to detect because of matrix ion interference. To determine the optimal matrix conditions, we tested different combinations of 3-HC and ATT, while adding trifluoroacetic acid (TFA) and/or piperidine as additives. The new combination matrix was applied on the brain, kidney, and liver tissue sections of mice treated with donepezil.16 These results support the potential of this combination matrix as an imaging tool for distribution of drugs and their metabolites through tissues.
Donepezil and gefitinib were kind gifts from Eisai Korea and AstraZeneca Korea, respectively. All materials were of laboratory grade and were used without purification.
For imaging, an ImagePrep™ instrument (Bruker Daltonics) was used to spray a total of 2 mL matrix solution on a tissue section. After matrix application, the MTP slide adapter (Bruker Daltonics) mounted with the tissue section ITO slide was directly transferred to the Ultraflex MALDI mass spectrometer (Bruker Daltonics). MS data acquisition was performed by averaging signals from 1000 consecutive laser shots. The MS data were acquired in the m/z range between 0 and 500. Before acquisition, the spectra were calibrated using a calibration standard. The spatial resolution of all the mass images shown in this work was 150 μm. The total spectra obtained were baseline subtracted. MS/MS analysis was performed directly on tissue. All acquired profiling, imaging and MS/MS data were analyzed by Flexanalysis and Fleximaging software (Bruker Daltonics).
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Fig. 1 Comparison of MALDI-TOF spectra of matrices (A), donepezil (1 ng per plate) (B) and gefitinib (1 ng per plate) (C) analyzed with ATT, 3-HC and the combination matrix in the low molecular weight region (arrow indicates peaks for [M + H]+ of the target molecules). |
Because both 3-HC and ATT showed a high potential for small molecule analysis, we examined the effectiveness of the binary matrix of 3-HC and ATT. We combined these 2 elements in a 1:
1 ratio, each dissolved in 50% ACN with 0.2% TFA at a concentration of 10 mg mL−1 and obtained a noteworthy result with the condition (Fig. S1†). To evaluate the combination matrix, we used four different amino acids (Ala, Met, Thr and Trp) and two chemical drugs (gefitinib and donepezil). Solutions of chemical drugs and amino acids were prepared (ranging from 1 ng mL−1 to 1 mg mL−1) and mixed with the same volume of the matrix solution. The mixture solutions (2 μL each, corresponding to 1 pg to 1 μg on the target plate) were dropped on the MALDI target plate for the profiling experiment. After drying the spots, each spot was tested under the same MALDI condition under positive ionization mode.
Fig. 1A shows the background peaks of single ATT, 3-HC and the combination matrix in the region below m/z 500 from the MALDI spectrum. The combination matrix shows few peaks in the neighboring regions of the mentioned m/z region (Fig. 1A). Small molecules were analyzed using ATT and 3-HC alone and their combination, and the spectrum obtained with the different matrices was compared in terms of intensity and the S/N ratio (Table 1 and Fig. 1). As shown in Fig. S3,† relative intensities of amino acids and drugs were higher than the neighboring background peaks of the combination matrix itself in the case of all samples. Small molecules with the combination matrix were ionized efficiently and showed clear peaks of small molecules at their expected m/z values with the protonated forms, [M + H]+. The representative MALDI spectra presented were obtained from 1 ng of analytes with different matrix conditions (Fig. 1B and C). The peak corresponding to 1 ng of donepezil appeared at a higher S/N ratio of 1474 using the combination matrix then using ATT (S/N 330), and 3-HC (S/N 17) (Fig. 1B). For gefitinib, S/N ratios were 7.1 with 3-HC, 77.5 with ATT and 142 with the combination matrix (Fig. 1C). These results showed that the combination of ATT and 3-HC, which we named “combination matrix,” provides optimal efficiency in target ionization and has minimal interference for small molecule analysis.
Amount on the plate (g) | 3-HC | ATT | Combination | ||||
---|---|---|---|---|---|---|---|
Intensity | S/N | Intensity | S/N | Intensity | S/N | ||
Donepezil | 1 × 10−6 | 656![]() |
1582.7 | 640![]() |
2645.3 | 813![]() |
1340.9 |
1 × 10−9 | 140![]() |
12![]() |
313![]() |
1369 | 680![]() |
744.3 | |
1 × 10−12 | 2452.61 | 194.5 | 18![]() |
23.1 | 12![]() |
45.4 | |
Gefitinib | 1 × 10−6 | 356![]() |
604.5 | 436![]() |
181.2 | 71![]() |
262.2 |
1 × 10−9 | 143.0 | 7.1 | 42![]() |
77.5 | 60![]() |
142.4 | |
1 × 10−12 | 84.0 | 33.3 | 12![]() |
18.9 | 530.0 | 29.9 |
![]() | ||
Fig. 2 Typical IMS images and MALDI spectra from the 200–400 m/z region and images of donepezil on tissue (n = 3). (A) Donepezil distribution in the brain tissue, where the intensity of the drug is higher in the cortex region. (B) Brain images from drug-free mouse as a blank control. (C) Donepezil distribution in the kidney tissue. The drug showed a very scattered distribution in the kidney. (D) Drug distribution in the liver tissue, where the drug is located only on the outer surface of the tissue. IMS was performed with the combination matrix. Optical images of brain sections after matrix crystallization were also shown (B and D). |
After oral dosing of donepezil it has been reported that the activity of brain AchE is decreased significantly, albeit to a small extent compared with the AchE activity in plasma.18,19 The ratio of donepezil in the brain and plasma is reported to be 4.4:
1 ± 0.3 in young animals and 5.3
:
1 ± 1.8 in old animals, respectively.19 Although these studies clearly suggest that the infiltration and accumulation of donepezil in the brain are responsible for the decreased AchE activity in the brain, they do not provide the detailed anatomical correlationship of pharmacokinetic behaviors of donepezil in the brain with the observed pharmacodynamic changes in the brain including the inhibition of AchE activity or differential expression of muscarinic acetylcholine receptors.20 Combining the pharmacokinetic methods presented here with the imaging mass spectrophotometric determination of changes in cholinergic components in the brain will provide in depth information on the brain region specific PK/PD parameters, which might be also applicable to other chemicals and therapeutic reagents as well.
The total MS spectra in the m/z range 200–400 obtained from the brain, kidney, and liver are shown in Fig. 2. Because MALDI imaging was performed directly on tissue slices without extra processing, several peaks from different biomolecules appeared in addition to the total MS spectra. However, a distinct signal of donepezil was obtained. Previous profiling studies indicated that the donepezil peak that appeared at m/z 380 was also found on an average spectrum after imaging the entire tissue. The donepezil peak shows a clearer distribution in the brain and kidney tissue sections than on the liver tissue section (Fig. 2). However, on the kidney tissue section, the donepezil peak did not show any significant localization. The donepezil signal was more intense in the cortex region of the brain tissue. This conforms to the fact that most of the beta-amyloid plaques are located in the cortex region for Alzheimer's disease21,22 and that the drug can effectively reach its target site. Tissue imaging and drug mapping confirmed that donepezil can be successfully delivered to its target organ and is active at 60 min after administration.
The donepezil administrated mouse brain section, sprayed with the conventional 2,5-DHB matrix was also analyzed by IMS (Fig. S4†). However, after the imaging of the whole drug administrated brain section, the donepezil peak did not appear (Fig. S4†). On the other hand, the newly developed combination matrix successfully identified donepezil from three different organs of mouse by IMS.
Footnotes |
† Electronic supplementary information (ESI) available. See DOI: 10.1039/c2an35782h |
‡ These authors contributed equally. |
This journal is © The Royal Society of Chemistry 2012 |