Pedro Z.
Andrade
a,
Francisco
dos Santos
a,
Graça
Almeida-Porada
b,
Cláudia
Lobato da Silva
a and
Joaquim M.
S. Cabral
a
aIBB-Institute for Biotechnology and Bioengineering, Centre for Biological and Chemical Engineering, Instituto Superior Técnico, Lisboa, Portugal. E-mail: joaquim.cabral@ist.utl.pt; Fax: +351 218419062; Tel: +351 218419063
bDepartment of Animal Biotechnology, University of Nevada, Reno, NV, USA
First published on 27th April 2010
The major obstacle to the widespread use of umbilical cord blood (UCB) in hematopoietic stem/progenitor (HSC) cell therapy is the low cell dose available. A cytokine cocktail for the ex vivo expansion of UCB HSC, in co-culture with a bone marrow (BM) mesenchymal stem cells (MSC)-derived stromal layer was optimized using an experimental design approach. Proliferation of total cells (TNC), stem/progenitor cells (CD34+) and colony-forming units (CFU) was assessed after 7 days in culture, while sole and interactive effects of each cytokine on HSC expansion were statistically determined using a two-level Face-Centered Cube Design. The optimal cytokine cocktail obtained for HSC-MSC co-cultures was composed by SCF, Flt-3L and TPO (60, 55 and 50 ng mL−1, respectively), resulting in 33-fold expansion in TNC, 17-fold in CD34+ cells, 3-fold in CD34+CD90+ cells and 21-fold in CFU-MIX. More importantly, these short-term expanded cells preserved their telomere length and extensively generated cobblestone area-forming cells (CAFCs) in vitro. The statistical tools used herein contributed for the rational delineation of the cytokine concentration range, in a cost-effective way, while systematically addressing complex cytokine-to-cytokine interactions, for the efficient HSC expansion towards the generation of clinically significant cell numbers for transplantation.
In fact, a very recent study demonstrated that after a 10-day ex vivo expansion, UCB CD34+ cells showed multilineage repopulation after long-term and secondary engraftment in sublethally irradiated NOD/SCID/IL-2R−/− mouse, comparable to non-expanded HSC.4 Within the CD34+ cell fraction, CD34+CD90+ cells, in particular, demonstrated to be efficient in achieving rapid and sustained cell engraftment;5 indeed, CD90 (Thy-1) expression has been recognized as superior to CD38 (i.e. CD34+CD38−) and other markers as predictor of the repopulating activity of CD34+ cells.6
Several ex vivo culture systems have been used with different rates of success namely by testing different cytokine cocktails in stroma-containing or stroma-free cultures with serum or in serum-free conditions.7–11 Indeed, most cytokine combinations tested include SCF, Flt-3L and TPO presumed to promote extensive cell self-renewal and to limit levels of apoptosis.9,12 Nevertheless, numerous other molecules have been tested in ex vivo HSC cultures: Zhang and co-workers obtained a 20-fold increase in SCID repopulating cells when IGF-binding protein 2 and angiopoietin-like 5 were added to a cytokine cocktail composed by SCF, FGF and TPO;13 Araki and collaborators tested the chromatin modifying agents 5-aza-2′-deoxycytidine D (5-AzaD) and trichostatin (TSA) with encouraging HSC expansion levels,14 whereas Peled and co-workers reported significant enhancement of HSC proliferation with lower levels of differentiation using the copper-chelator agent, TEPA.15 In addition, in combination with other cytokines, ex vivo expanded UCB CD133+ cells using TEPA have been used in a phase I/II clinical trial, with high engraftment rates.16
In our laboratory, we have previously established a serum-free culture system using human BM MSC-derived feeder layers, supplemented with SCF, Flt-3, bFGF and LIF, which allowed an efficient expansion/maintenance of HSC from BM and UCB.3,17 In particular for UCB, HSC-MSC cellular interactions were shown to be crucial for the extensive expansion of CD34+, CD34+CD38− cells and CFU-MIX in vitro.18
An effective ex vivo expansion protocol that would maximize the cell output for a clinical application requires multidimensional optimization, featuring proliferation/differentiation, feeding regimen, product yield, quality and operational costs.19,20 To this end, experimental designs have been implemented, particularly regarding the optimization of cytokine cocktails for the efficient generation of megakaryocytes,21 hematopoietic repopulating cells22 and UCB CD34+ cells23 in liquid cultures. Nevertheless, to our knowledge, no studies focusing the systematic optimization of the cytokine cocktail for such a complex HSC-MSC co-culture system are found in the literature. Furthermore, particular cytokine interactive effects have been reported in the literature, especially focusing on SCF use with other hematopoietic cytokines,21,22,24 highlighting the importance of depicting epigenetic events occurring in such a complex system.14
Here we used an experimental design approach to: (i) optimize our previously established cytokine cocktail,3 which was anticipated to exert its effect through a BM MSC-derived stromal layer, for instance, by including TPO, while providing a rational basis on the concentrations typically used; and (ii) to determine the synergistic and sole effects of the cytokines used towards the efficient generation of clinically relevant, quality-controlled, cell numbers in a short-term culture period.
The cytokines used to supplement culture medium were SCF, Flt-3L, bFGF and TPO (Peprotech) and LIF (Chemicon), tested in different combinations and/or concentrations. For the validation studies (14 days cultures), two controls were performed: (i) without exogenously added cytokines, with a stromal layer (No Cyt) and (ii) without stromal layer, using the most successful cytokine cocktail optimized by the experimental design approach (No Stroma).
The cytokine-related costs of expanding TNC, CD34+ and CD34+CD90+ cells (€/cells generated) in our co-culture conditions were determined. For that we used the on-line available pricelist for 2010 of the suppliers of human recombinant SCF, Flt-3L, TPO and LIF. The % reduction was calculated by dividing the amount saved by using Cocktail X (Y-X) per the culture costs using cocktail Y.
y = K + β1(x1) + β2(x2) + β3(x3) + β4(x4) + β1,2(x1,2) + β1,3(x1,3) + β1,4(x1,4) + β2,3(x2,3) + β2,4(x2,4) + β3,4(x3,4) + β1,1(x1)2 + β2,2(x2)2 + β3,3(x3)2 + β4,4(x4)2 | (1) |
Validation results are presented as mean ± standard error of mean (SEM). Comparisons between experimental results were determined by Mann-Whitney test for independent samples, when appropriate. A p-value less than 0.05 was considered statistically significant.
This strategy allowed the statistical determination of the main effects of SCF, Flt-3L, LIF and TPO on hematopoietic stem/progenitor cell expansion, as well as all second-order interactions, present in eqn (1), for each of the 4 responses measured: fold increase in TNC, CD34+ cells, CFU-GM and CFU-MIX. The regression coefficients, their p-value and the summary of fitting (R2 and Lack of Fit test) for each of these responses are presented in Table 2.
Term | FI (TNC) | FI (CD34+ cells) | FI (CFU-GM) | FI (CFU-MIX) | ||||
---|---|---|---|---|---|---|---|---|
Value | P value | Value | P value | Value | P value | Value | P value | |
a RMSE—Root mean square error. | ||||||||
K | −1.037 | <0.01 | −0.045 | <0.01 | −0.395 | <0.01 | −0.846 | <0.01 |
βSCF | 0.613 | <0.01 | 0.394 | <0.01 | 0.219 | <0.01 | 0.317 | 0.291 |
βFlt-3L | 0.405 | 0.163 | 0.223 | 0.200 | 0.146 | 0.165 | 0.260 | 0.465 |
βTPO | 0.097 | 0.039 | 0.069 | 0.046 | 0.056 | 0.031 | 0.004 | 0.095 |
βSCFxSCF | −0.005 | <0.01 | −0.003 | <0.01 | −0.002 | <0.01 | −0.003 | <0.01 |
βFlt-3LxFlt-3L | −0.004 | <0.01 | −0.002 | <0.01 | −0.001 | <0.01 | −0.002 | <0.01 |
R2 | 0.87 | 0.82 | 0.74 | 0.87 | ||||
RMSEa | 4.7 | 3.5 | 2.9 | 2.7 | ||||
Lack of fit test p-value | 0.12 | 0.38 | 0.31 | 0.19 |
The second order polynomials generated for each response described a significant percentage of the experimental data (0.87 > R2 > 0.74), with no Lack Of Fit associated (0.38 > p > 0.12) (Table 2).
Table 2 presents the statistically significant parameter values of eqn (1), as well as the summary of the fit for each model. The statistical analysis of our data showed that LIF does not have a significant impact in any of the responses (both main and interactive effects)—p > 0.05. In addition, it is possible to observe that Flt-3L main effect is not significant for any of the responses (p > 0.163), while SCF was non-significant only for the expansion of CFU-MIX (p = 0.291). Nevertheless, for both cases, since the quadratic terms (Flt-3L2 and SCF2) were significant (p < 0.01), the first order coefficients were reintroduced into the model. Interestingly, for all of the responses measured, the second order terms SCF2 and Flt-3L2 were negative indicating a downward concavity of the models, suggesting the existence of a maximum value in the cytokine concentration range in study (Fig. 1).
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Fig. 1 3-D representation of the Face-centered composite design (FCCD) as a function of Flt-3L and SCF. (a): Fold increase in TNC. (b): Fold increase in CD34+ cells. (c): Fold increase in CFU-MIX. (d): Fold increase in CFU-GM. TPO was set at 50 ng mL−1. |
As a result of the models established, the optimal cytokine concentrations for each response were graphically determined and are presented in Table 3. The predicted SCF concentrations that maximize the responses range from 52 to 68 ng mL−1, while Flt-3L varies from 52 to 55 ng mL−1. Since TPO had a positive main effect (in the absence of a significant second order term), the maximum concentration tested (50 ng mL−1) also maximizes the expansion of hematopoietic stem/progenitor cells, although the optimum value for this cytokine should be located outside of the range tested (>50 ng mL−1). Interestingly, all the optimized cocktails are roughly similar, which clearly indicates that the responses measured are highly correlated.
The HSC-MSC co-cultures were performed in a 14-day period, being analyzed at days 3, 7, 10 and 14 in terms of TNC, the hematopoietic stem/progenitor phenotypes CD34+ and CD34+CD90+, and for the more committed progenitors from the early lymphoid (CD7+), myeloid (CD14+, CD15+ and CD33+) and megakaryocytic lineages (CD41a+ cells) (Fig. 2 and Table 5). In addition, the clonogenic potential of both fresh and expanded cells was assessed by CFU-MIX and CFU-GM assays (Fig. 3a and b), as well as their ability to form cobblestone areas (CAFC) and cell relative telomere length (RTL) (Fig. 4a and b).
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Fig. 2 Validation of the model predictions. Fold increase in (a) TNC (n = 6), (b) CD34+ (n = 6) and (c) CD34+CD90+ (n = 6) cells after two weeks in HSC-MSC co-culture supplemented with the cytokine cocktails present in Table 4. No phenotypic analyses were performed for the No Stroma condition due to the low amounts of cells generated. Results are presented as Mean ± SEM. * p < 0.05. |
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Fig. 3 Clonogenic Potential of expanded cells supplemented with the cytokine cocktails presented in Table 4: the optimal cytokine cocktail obtained in this study (Z9), our previous cytokine cocktail (CR5) and two controls, without cytokines (No Cyt) and in the absence of stroma, using Z9 cocktail (No Stroma). Fold increase in CFU-MIX (a) and CFU-GM (b), during time in culture for each condition, are presented as values ± SEM (n = 4; *p < 0.05). |
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Fig. 4 Expansion of umbilical cord blood hematopoietic cells in co-culture with BM MSC using different cytokine combinations, present in Table 4. The fold increase in cobblestone area-forming cells (CAFCs) (a) and the relative telomere length (b) were determined during time in culture for Z9, CR5, No Cyt and No Stroma conditions. Results are presented as Mean ± SEM (n = 4; *p < 0.05). |
Time (days) | % CD7+ | % CD14+ | % CD15+ | % CD33+ | % CD41a+ | |||||
---|---|---|---|---|---|---|---|---|---|---|
Z9 | CR5 | Z9 | CR5 | Z9 | CR5 | Z9 | CR5 | Z9 | CR5 | |
0 | 8.5 ± 0.9 | 7.3 ± 2.5 | 11.5 ± 1.8 | 88.4 ± 3.7 | 1.4 ± 0.2 | |||||
10 | 40.0 ± 4.0 | 38.2 ± 6.4 | 24.1 ± 4.3 | 16.7 ± 2.4 | 46.2 ± 3.9 | 46.7 ± 7.9 | 87.7 ± 3.6 | 92.6 ± 1.3 | 2.3 ± 0.8 (*) | 0.8 ± 0.1 (*) |
14 | 46.6 ± 3.1 | 48.9 ± 3.0 | 23.5 ± 4.3 | 25.1 ± 2.1 | 52.5 ± 4.6 | 49.4 ± 4.8 | 93.8 ± 1.4 | 89.2 ± 1.9 | 5.8 ± 0.7 (*) | 1.3 ± 0.1 (*) |
In agreement with the model predictions, Z9 cocktail provided the highest fold increases in TNC (26±2-fold) and CD34+ cells (16 ± 1-fold) after 7 days in culture (Fig. 2a and b) (p < 0.05). Most importantly, Z9 combination led to the highest expansion of the most primitive CD34+CD90+ cells (3.8 ± 0.7-fold) and CAFC (26.4 ± 4.3) (p < 0.05), while retaining their relative telomere length (97 ± 3%) (Fig. 4a and b) after one-week culture period. When compared with our previous cytokine cocktail (CR5),3 Z9 provided significantly higher stem/progenitor cell expansion levels (p < 0.05), representing an optimization factor of 1.7 for TNC and CD34+ cell expansion, and a 2.7 factor for CD34+CD90+ cell expansion. In addition, the lower levels of cytokines required in Z9 along with higher HSC productivities, led to a reduction of 47, 55 and 62% in cytokine-related culture costs for the generation of TNC, CD34+ and CD34+CD90+ cells, respectively, in a 7-day period.
As expected, hematopoietic cells cultured either in the absence of the stromal feeder layer (No Stroma) or without cytokines (No Cyt) did not present any significant expansion of TNC (when compared to any of the other conditions—p < 0.05), being roughly similar at day 14 (16-fold and 12-fold, respectively). Interestingly, the No Cyt condition presented higher CAFCs expansion levels (although non-significant; p > 0.05), when compared to the No Stroma condition, especially at day 14 (2.7 ± 1.4 and 0.2 ± 0.1, respectively) (Fig. 4a).
The differentiative potential of the expanded cells was studied during time in culture, testing for the early lymphocytic (CD7+ cells), myeloid (CD14+, CD15+ and CD33+ cells) and megakaryocytic (CD41a+ cells) lineages (Table 5). Z9 and CR5 conditions were able to successfully maintain/expand these progenitors in agreement with our previous results.3,17 As expected by the absence of TPO, CR5 cocktail resulted in significantly lower levels of the megakaryocytic progenitor cells CD41a+ (0.8 ± 0.1% and 1.3 ± 0.1% at days 7 and 14) when compared to Z9 (2.3 ± 0.8 and 1.3 ± 0.1% at days 7 and 14, respectively) (p < 0.05).
In terms of clonogenic potential, Z9 presented higher expansion rates of CFU-MIX (106 ± 10-fold at day 14) and CFU-GM (488 ± 9-fold) when compared to CR5 (49 ± 4 and 389 ± 17, respectively; p < 0.05), especially later in culture, consistent with the observed expansion of TNC and CD34+ cells (Fig. 2a and b), as well as with the differentiative potential of the expanded cells shifted mainly towards the myeloid lineage, as assessed by the immunophenotypic analysis (Table 5).
In the present study, our goal was to optimize our previously established cytokine cocktail, while providing a rational basis on the concentrations to be used, by using an experimental design. We focused on the generation of clinically significant cell numbers in a short-term (1 week) period, as the optimal time for an efficient static liquid culture should be limited to 7–14 days.19 To our best knowledge, no systematic optimization on the cytokine cocktail composition was performed in a HSC-MSC co-culture system. In particular, we tested if we could further improve the rate of expansion of UCB stem/progenitor cells in our stromal-based culture system by including to the early acting SCF and Flt-3L, TPO, a cytokine described as efficient at promoting the viability of the more primitive cells, while suppressing apoptosis.12,29
A FC-CD was performed in which 4 factors (SCF, Flt-3L, TPO and LIF) in two different levels were correlated with the fold expansion of both TNC, CD34+ cells, CFU-MIX and CFU-GM after 7 days in co-culture with BM MSC. bFGF concentration was not included as a target of our optimization strategy, since this factor was included basically for the maintenance of the stromal feeder layers in the absence of serum.3
Consistent with other reports, SCF, Flt-3L and TPO exhibited statistically significant positive effects on the expansion of HSC.12 Interestingly, for all the responses measured, the second order terms SCF2 and Flt-3L2 were found to be negative and highly significant, leading to the determination of a local maximum in the range of our study (0–100 ng mL−1), due to the downward concavity of the resulting models. Biologically, these negative second order terms probably mean a significant inhibition of hematopoietic stem/progenitor cell growth when large amounts of SCF and/or Flt-3 are added to the cultures, suggesting a substrate inhibition-like effect, typically found in biological reactions. In addition, our design allowed the estimation of interactive cytokine effects, which have been reported in the literature, especially involving SCF with other cytokines.14,21,22,30 Although none of the interactions determined were statistically significant, for any of the responses measured, there is an improvement in the response by using increasing concentrations of SCF and Flt-3L, resulting in an optimized cytokine cocktail composed by SCF (60 ng mL−1), Flt-3L (55 ng mL−1) and TPO (50 ng mL−1)—Z9, for the expansion of TNC, and CD34+ cells, after 7 days in co-culture. These model-predicted values were validated in another set of experiments and represent a 2-fold higher cell productivity with significant reduction in culture costs (50–65%) due to the substantial reduction in cytokine concentrations, when compared with our previously used cytokine cocktail.3 In addition, Z9 combination provided a 4-fold expansion of the more primitive CD34+CD90+ cells14 after 7 days in culture, while retaining their telomere length and the ability to form cobblestone areas in vitro. Telomere length and telomerase activity constitute strong evidence of the quality of the expanded graft.31 Consistent with our results, Gammaitoni and co-workers reported telomere length maintenance and up-regulation of telomerase activity in long-term cultures of UCB, BM and mobilized peripheral blood (MPB) CD34+ cells, with a 20-fold increase in CAFCs after 4 weeks in co-culture with OP9 cells.32 Interestingly, in our studies, hematopoietic cells cultured in the presence of stroma, non cytokine-supplemented, provided consistently higher expansion levels of CAFCs, when compared with cells grown without feeder layer, supplemented with our optimized cytokine cocktail (Z9). These results suggest a strong effect of the BM-derived stroma on the maintenance/expansion of CAFCs,33 described as a measure of SCID repopulating ability.34 We reason that BM MSC-based feeder cell layer, even in the absence of exogenously added cytokines, is able to produce growth factors such as SCF, LIF and Flt-3L.35 The produced growth factors, although at a basal level, together with the cell-to-cell interactions provided by the feeder cells,28 are able to preserve a subset of the more primitive long-term repopulating cells, here assessed by the CAFC content, during the two-week culture period.36
In the present FC-CD studies (7 days), LIF presented a positive main effect on HSC-MSC co-cultures, though without statistical significance. Nevertheless, since previous results by our group suggest that LIF might have a more pronounced effect on progenitor expansion, especially later in culture,18,28 ongoing studies are currently being performed in our lab to depict the precise mechanism of action of LIF in the present co-culture system.
The differentiative potential of the expanded cells using the different cocktails was primarily shifted towards the myeloid lineage, as assessed by immunophenotypic analysis and clonogenic potential studies, as previously reported, while maintaining a significant percentage of cells with an early lymphocytic potential (CD7+ cells).3,37 As expected by the absence of TPO, the CR5 cocktail3 yielded the lowest levels of the megakaryocytic progenitor cells CD41a+ when compared to Z9 (with TPO). Indeed, it has been widely reported in the literature the classical strong effect of TPO on thrombopoiesis.38
In summary, we have successfully optimized a cytokine cocktail for the ex vivo expansion of UCB HSC in co-culture with BM MSC, in a one-week time period, using an experimental design approach. In addition, our results contribute for the rational delineation of the concentration range of the cytokines to be used in a HSC expansion protocol, in a systematic and cost-effective way, while quantitatively addressing the complex interactions among cytokines/growth factors. More importantly, the expanded cells maintained their telomere length and extensively originated cobblestones in vitro. This work offers important clues to better understand the cellular determinants underlying ex vivo expansion of HSC, providing the basis for the establishment of efficient and controlled culture systems for the generation of clinically significant cell numbers in the settings of BM transplantation using UCB expanded cells.
This work was financially supported by MIT-Portugal Program and grants SFRH/BD/38720/2007 and SFRH/BD/38719/2007 awarded to Pedro Z. Andrade and Francisco dos Santos from Fundação para a Ciência e a Tecnologia, Portugal.
The authors declare no conflict of interests.
This journal is © The Royal Society of Chemistry 2010 |