Glycerol condensed phases Part I. A molecular dynamics study

(Note: The full text of this document is currently only available in the PDF Version )

Riccardo Chelli, Piero Procacci, Gianni Cardini, Raffaele G. Della Valle and Salvatore Califano


Abstract

Using a model potential function we have performed a molecular dynamics simulation of several static and dynamical properties of glycerol in the crystal, glass and liquid phases. Comparison with available experimental data shows an excellent agreeent and proves the validity of the potential model used. For the calculation of the molar specific heat of the liquid and of the glass we have developed a theoretical approach which takes into account the contributions of the conformational structure energy and of the vibrational energy computed using the Bose–Einstein statistics.


References

  1. W. T. Grubbs and R. A. MacPhail, J. Chem. Phys., 1994, 100, 2561 CrossRef CAS.
  2. J. Wuttke, J. Hernandez, G. Li, G. Coddens, H. Z. Cummins, F. Fujara, W. Petry and H. Sillescu, Phys. Rev. Lett., 1994, 72, 3052 CrossRef CAS.
  3. J. P. Hansen and I. R. McDonald, Theory of Simple Liquids, Academic Press, London, 1976 Search PubMed.
  4. M. P. Allen and D. J. Tildesley, Computer Simulation of Liquids, Clarendon Press, Oxford, 1987 Search PubMed.
  5. D. Frenkel and B. Smit, Understanding Molecular Simulations, Academic Press, San Diego, 1996 Search PubMed.
  6. L. J. Root and F. H. Stillinger, J. Chem. Phys., 1989, 90, 1200 CrossRef CAS.
  7. L. J. Root and F. H. Stillinger, Phys. Rev. B, 1990, 41, 2348 CrossRef CAS.
  8. I. Benjamin, M. Wilson and A. Pohorille, J. Chem. Phys., 1994, 100, 6500 CrossRef.
  9. L. J. Root and B. J. Berne, J. Chem. Phys., 1997, 107, 4350 CrossRef CAS.
  10. H. van Koningsveld, Rec. Trav. Chim., 1968, 87, 243 CAS.
  11. G. Cardini and V. Schettino, Chem. Phys., 1990, 146, 147 CrossRef CAS.
  12. J. P. Ryckaert, I. R. McDonald and M. L. Klein, Mol. Phys., 1989, 67, 957 CAS.
  13. J. P. Bareman, G. Cardini and M. L. Klein, Mat. Res. Soc. Symp. Proc., 1989, 141, 411 CAS.
  14. W. D. Cornell, P. Cieplak, C. I. Bayly, I. R. Gould, K. M. Merz, D. M. Ferguson, D. C. Spellmeyer, T. Fox, J. W. Caldwell and P. A. Kollman, J. Am. Chem. Soc., 1995, 117, 5179 CrossRef CAS.
  15. O. Bastiansen, Acta Chem. Scand., 1949, 3, 415 CAS.
  16. M. Garawi, J. C. Dore and D. C. Champeney, Mol. Phys., 1987, 62, 475 CAS.
  17. D. C. Champeney, R. N. Joarder and J. C. Dore, Mol. Phys., 1986, 58, 337 CAS.
  18. J. Dawidowski, F. J. Bermejo, R. Fayos, R. Fernández-Perea, S. M. Bennington and A. Criado, Phys. Rev. E, 1996, 53, 5079 CrossRef CAS.
  19. R. Chelli, P. Procacci, G. Cardini and S. Califano, Phys. Chem. Chem. Phys., 1999, 1, 879 RSC.
  20. M. Tuckerman, B. J. Berne and G. J. Martyna, J. Chem. Phys., 1992, 97, 1990 CrossRef CAS.
  21. S. J. Stuart, R. Zhou and B. J. Berne, J. Chem. Phys., 1996, 105, 1426 CrossRef CAS.
  22. P. Procacci and B. J. Berne, J. Chem. Phys., 1994, 101, 2421 CrossRef CAS.
  23. D. D. Humphreys, R. A. Friesner and B. J. Berne, J. Chem. Phys., 1994, 98, 6885 CAS.
  24. P. Procacci and M. Marchi, J. Chem. Phys., 1996, 104, 3003 CrossRef CAS.
  25. P. Procacci, T. Darden and M. Marchi, J. Phys. Chem., 1996, 100, 10464 CrossRef CAS.
  26. G. Ciccotti and J. P. Ryckaert, Comput. Phys. Report, 1986, 4, 345 Search PubMed.
  27. B. R. Brooks, R. E. Bruccoeri, B. D. Olafson, D. States, S. Swaminanthan and M. Karplus, J. Comput. Chem., 1983, 4, 187 CrossRef CAS.
  28. W. van Gunsteren and H. J. C. Berendsen, Gröningen Molecular Simulation (GROMOS) Library Manual, Biomos, Gröningen, 1987 Search PubMed.
  29. J. A. D. MacKerell, D. Bashford, M. Bellott, J. R. L. Dunbrack, J. D. Evanseck, M. J. Field, S. Fischer, J. Gao, H. Guo, S. Ha, D. Joseph-McCarthy, L. Kuchnir, K. Kuczera, F. T. K. Lau, C. Mattos, S. Michnick, T. Ngo, D. T. Nguyen, B. Prodhom, W. E. Reiher III, B. Roux, M. Schlenkrich, J. C. Smith, R. Stote, J. Straub, M. Watanabe, J. Wiorkiewicz-Kuczera, D. Yin and M. Karplus, J. Phys. Chem. B, 1998, 102, 3586 CrossRef CAS.
  30. M. Marchi and P. Procacci, J. Chem. Phys., 1998, 109, 5196 CrossRef.
  31. R. Chelli, P. Procacci, G. Cardini and S. Califano, in preparation.
  32. P. Procacci, T. A. Darden, E. Paci and M. Marchi, J. Comput. Chem., 1997, 18, 1848 CrossRef CAS.
  33. R. W. Hockney, Computer Simulation Using Particles, McGraw-Hill, New York, 1989 Search PubMed.
  34. T. Darden, D. York and L. G. Pedersen, J. Chem. Phys., 1993, 98, 10089 CrossRef CAS.
  35. U. Essmann, L. Perera, M. L. Berkowitz, T. Darden, H. Lee and L. G. Pedersen, J. Chem. Phys., 1995, 101, 8577 CrossRef CAS.
  36. Handbook of Chemistry and Physics, ed. D. R. Lide, CRC Press, Boca Raton, 78th edition, 1997–1998 Search PubMed.
  37. M. Parrinello and A. Rahman, Phys. Rev. Lett., 1980, 45, 1196 CrossRef.
  38. S. Nosé and M. L. Klein, Mol. Phys., 1983, 50, 1055 CAS.
  39. W. G. Hoover, Phys. Rev. A, 1985, 31, 1695 CrossRef.
  40. H. C. Andersen, J. Chem. Phys., 1980, 72, 2384 CrossRef CAS.
  41. M. Wolfe and J. Jonas, J. Chem. Phys., 1979, 71, 3252 CrossRef CAS.
  42. M. Rajeswari and A. K. Raychaudhuri, Phys. Rev. B, 1993, 47, 3036 CrossRef CAS.
  43. M. R. Carpenter, D. B. Davies and A. J. Matheson, J. Chem. Phys., 1967, 46, 2451 CAS.
  44. F. J. Bermejo, A. Criado, A. de Andres, E. Enciso and H. Schober, Phys. Rev. B, 1996, 53, 5259 CrossRef CAS.
  45. G. E. Gibson and W. F. Giauque, J. Am. Chem. Soc., 1923, 45, 93 CrossRef CAS.
  46. C. Allain and P. Lallemand, J. Phys. (Paris), 1979, 40, 693 Search PubMed.
  47. F. H. Stillinger and T. A. Weber, Phys. Rev. A, 1982, 25, 978 CrossRef CAS.
  48. F. H. Stillinger, J. Phys. Chem., 1984, 88, 6494 CrossRef CAS.
  49. L. van Den Enden, C. van Alsenoy, J. N. Scarsdale and L. Schäfer, J. Mol. Struct. (Theochem), 1983, 104, 471 CrossRef.
  50. C. van Alsenoy, J. Mol. Struct. (Theochem), 1985, 121, 153 CrossRef.
  51. B. J. Teppen, M. Cao, R. F. Frey, C. van Alsenoy, D. M. Miller and L. Schäfer, J. Mol. Struct. (Theochem), 1994, 314, 169 CrossRef.
  52. F. Fujara, W. Petry, R. M. Diehl, W. Schnauss and H. Sillescu, Europhys. Lett., 1991, 14, 563 Search PubMed.
  53. R. G. Della Valle and E. Venuti, Chem. Phys., 1994, 179, 411 CrossRef CAS.
  54. G. J. Cuello, F. J. Bermejo, R. Fayos, R. Fernández-Perea, A. Criado, F. Trouw, C. Tam, H. Schober, E. Enciso and N. G. Almarza, Phys. Rev. B, 1998, 57, 8254 CrossRef CAS.
Click here to see how this site uses Cookies. View our privacy policy here.