Simultaneous determination of guanine and adenine contents in DNA, RNA and synthetic oligonucleotides using a chemically modified electrode

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Jyh-Myng Zen, Ming-Ren Chang and Govindasamy Ilangovan


Abstract

Simultaneous determination of guanine and adenine contents in DNA, RNA and synthetic oligonucleotides on a Nafion–ruthenium oxide pyrochlore modified electrode is described. This chemically modified electrode shows very pronounced electrocatalytic effects towards the oxidation of guanine and adenine. The experimental parameters for individual determinations of guanine and adenine on the modified electrode were first optimised. Excellent detection limits (S/N = 3) of 0.86 ng ml–1 (5.7 nM) and 2.7 ng ml–1 (20 nM) for guanine and adenine, respectively, were obtained. Simultaneous determination of guanine and adenine in a mixture was also optimised. The denatured calf thymus DNA and yeast RNA showed oxidation peaks corresponding to guanine and adenine with a linear calibration line up to 5 µg ml–1 in pH 4.0 phosphate buffer. The detection limit estimated for these nucleic acids were 11.5 ng ml–1 and 37.7 ng ml–1 for guanine and adenine, respectively. The new method provides an alternative to estimate the guanine and adenine contents more selectively and sensitively than currently applied techniques.


References

  1. R. Sheng, F. Ni and T. M. Cotton, Anal. Chem., 1991, 63, 437 CrossRef CAS.
  2. M. Kai, Y. Ohkura, S. Yonekura and M. Iwasaki, Anal. Chim. Acta, 1994, 287, 75 CrossRef CAS.
  3. B. Todd, J. Zhao and G. Fleet, J. Microbiol. Methods, 1995, 22, 1 CrossRef CAS.
  4. T. Torda and J. M. Saavedra, Neuroendocrinology, 1990, 52, 361 Search PubMed.
  5. N. Kuroda, K. Nakashima and S. Akiyama, Anal. Chim. Acta, 1993, 278, 275 CrossRef CAS.
  6. H. C. Tseng, C. Dadoo and R. N. Zare, Anal. Biochem., 1994, 222, 55 CrossRef CAS.
  7. J. P. Hart, Electroanalysis of Biologically Important Compounds, Ellis Horwood, Chichester, 1990, p. 51 Search PubMed.
  8. D.-W. Pang, Y.-P. Qi, Z.-L. Wang, J.-K. Cheng and J.-W. Wang, Electroanalysis, 1995, 7, 774 CAS.
  9. T. Nakahara, M. Okuzawa, H. Maeda, M. Hirano, T. Matsumoto and H. Uchimura, J. Chromatogr., 1992, 15, 1785 CAS.
  10. H. Lin, D. K. Xu and H. Y. Chen, J. Chromatogr. A, 1997, 760, 227 CrossRef CAS.
  11. J. Wang, L. Chen and M. Chicharro, Anal. Chim. Acta, 1996, 319, 349 CrossRef CAS.
  12. D. K. Xu, L. Hua and H. Y. Chen, Anal. Chim. Acta, 1996, 335, 95 CrossRef CAS.
  13. P. Singhal and W. G. Kuhr, Anal. Chem., 1997, 69, 3552 CrossRef CAS.
  14. P. Singhal and W. G. Kuhr, Anal. Chem., 1997, 69, 4828 CrossRef CAS.
  15. J. Wang, in Electroanalytical Chemistry, ed. A. J. Bard, Marcel Dekker, New York, 1989, vol. 16, p. 1 Search PubMed.
  16. E. Palecek, P. Boullikova and F. Jelen, Anal. Chim. Acta, 1986, 187, 99 CrossRef CAS.
  17. P. Boulikova, F. Jelen and E. Palecek, Stud. Biophys., 1986, 114, 83 Search PubMed.
  18. E. Palecek and I. Post Bieglova, J. Electroanal. Chem., 1986, 214, 359 CrossRef CAS.
  19. E. Palecek, Anal. Biochem., 1988, 170, 171.
  20. E. Palecek, Bioelectrochem. Bioenerg., 1988, 20, 171 CrossRef.
  21. E. Palecek, Bioelectrochem. Bioenerg., 1992, 28, 71 CrossRef CAS.
  22. E. Palecek, F. Jelen, C. Teijeiro, V. Fucik and T. M. Jovin, Anal. Chim. Acta, 1993, 273, 175 CrossRef CAS.
  23. E. Palecek and M. Fojta, Anal. Chem., 1994, 66, 1566 CrossRef CAS.
  24. E. Palecek, Anal. Lett., 1980, 13(B5), 331 CAS.
  25. E. Palecek, Anal. Biochem., 1980, 108, 129, 137.
  26. G. Dryhurst, Anal. Chim. Acta, 1971, 57, 137 CrossRef CAS.
  27. M. A. T. Gilmartin and J. P. Hart, Analyst, 1992, 117, 1613 RSC.
  28. X. Sun, Y. Chi and H. Chen, Microbiol. J., 1993, 47, 287 Search PubMed.
  29. R. M. Shubietah, A. Z. Abu Zuhri and A. G. Fogg, Fresenius' J. Anal. Chem., 1994, 348, 754 CAS.
  30. G. Dryhurst, Talanta, 1972, 19, 769 CrossRef CAS.
  31. X. Cai, B. Ogarevc and K. Kalcher, Electroanalysis, 1995, 7, 1126 CAS.
  32. R. L. McCreery, in Electroanalytical Chemistry, ed. A. J. Bard, Marcel Dekker, New York, 1991, vol. 13, p. 221 Search PubMed.
  33. J.-M. Zen and C.-B. Wang, J. Electroanal. Chem., 1994, 368, 251 CrossRef CAS.
  34. J.-M. Zen and J.-S. Tang, Anal. Chem., 1995, 67, 1892 CrossRef CAS.
  35. J.-M. Zen and Y.-S. Ting, Anal. Chim. Acta, 1997, 342, 175 CrossRef CAS.
  36. J.-M. Zen and J.-S. Tang, Anal. Chem., 1995, 67, 208 CrossRef CAS.
  37. J.-M. Zen and I.-L. Chen, Electroanalysis, 1997, 9, 537 CAS.
  38. J.-M. Zen, I.-L. Chen and Y. Shih, Anal. Chim. Acta, 1998, 369, 103 CrossRef CAS.
  39. R. H. Garrett and C. M. Crishan, Biochemistry, Saunders College Publishing, Orlando, 1995 Search PubMed.
  40. D. H. Johnson, K. C. Glasgow and H. H. Thorp, J. Am. Chem. Soc., 1995, 117, 8933 CrossRef CAS.
  41. K. Albert and E. Bayer, Trends Anal. Chem., 1988, 7, 288 CrossRef CAS.
  42. R. Y. Goyal and G. Dryhurst, J. Electroanal. Chem., 1982, 135, 75 CrossRef CAS.
  43. Y. Yao, T. Wasa and S. Musha, Bull. Chem. Soc. Jpn., 1977, 50, 2919.
  44. J. Wang and B. Freika, Bioelectrochem. Bioenerg., 1984, 12, 225 CrossRef CAS.
  45. A. J. Bard and L. R. Faulkner, Electrochemical Methods, Fundamental and Applications, Wiley, New York, 1980, ch. 6 Search PubMed.
  46. A. J. Bard and L. R. Faulkner, Electrochemical Methods, Fundamental and Applications, Wiley, New York 1980, ch. 5 Search PubMed.
  47. W. Jin, H. Wei and X. Zhao, Electroanalysis, 1997, 9, 770 CAS.
  48. G. Dryhurst and P. J. Elving, J. Electrochem. Soc., 1968, 115, 1014 CAS.
  49. Merck index, 11th edition.
  50. E. Palecek, Electroanalysis, 1996, 8, 7 CAS.
  51. J.-M. Zen, M.-R. Chang, H.-H. Chung and Y. Shih, Electroanalysis, 1998, 10, 517.
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