Synthesis of 7-alkynylated 8-aza-7-deaza-2′-deoxyadenosines via the Pd-catalysed cross-coupling reaction

(Note: The full text of this document is currently only available in the PDF Version )

Frank Seela and Matthias Zulauf


Abstract

The synthesis of 7-alkynylated 8-aza-7-deazaadenine (pyrazolo[3,4-d]pyrimidine) 2′-deoxyribonucleosides is described. Nucleobase anion-glycosylation of 8-aza-7-deaza-7-iodo-6-methoxypurine (15) with 2-deoxy-3,5-di-O-([hair space]p-toluoyl)-α-D-erythro-pentofuranosyl chloride (16) furnishes the 8-aza-7-deaza-7-iodo-6-methoxypurine N[hair space]1-β-D-2′-deoxyribonucleoside 17a as the main product (38% yield). After detoluoylation of products 17a and 17b[hair space]27 (→ 19a,b) and amination the 7-bromo and the 7-iodo derivatives of 8-aza-7-deaza-2′-deoxyadenosine (compounds 2b,c) were obtained. Compound 2b served as the starting material for a series of 7-alkynyl- or 7-alkenyl-8-aza-7-deazaadenine 2′-deoxynucleosides 3–13 by employing the Pd0/CuI-catalysed cross-coupling reaction. The 7-halogenated or 7-alkynylated nucleosides show a more stable glycosylic bond than does 8-aza-7-deaza-2′-deoxyadenosine (2a).


References

  1. E. Uhlmann and A. Peyman, Chem. Rev., 1990, 90, 543 CrossRef CAS.
  2. J. M. Tomkins, K. J. Barnes, A. J. Blacker, W. J. Watkins and C. Abell, Tetrahedron Lett., 1997, 38, 691 CrossRef CAS.
  3. A. Jäger and M. J. Hecht, Biochemistry, 1988, 27, 7237 CrossRef CAS.
  4. A. S. Boutorin, L. V. Gus'kova, E. M. Ivanova, N. D. Kobetz, V. F. Zarytova, A. S. Ryte, L. V. Yurchenko and V. V. Vlassov, FEBS Lett., 1989, 254, 129 CrossRef CAS.
  5. J. S. Cohen, Oligodeoxynucleotides-Antisense Inhibitors of Gene Expression, Topics in Molecular and Structural Biology, vol. 12, Macmillan Press, Houndmills, 1989 Search PubMed.
  6. J. Kypr, J. Sagi, E. Szakonyi, K. Ebinger, H. Penazova, J. Chladkova and M. Vorlickova, Biochemistry, 1994, 33, 3801 CrossRef CAS.
  7. B. C. Froehler, S. Wadwani, T. J. Terhorst and S. R. Gerrard, Tetrahedron Lett., 1992, 33, 5307 CrossRef CAS.
  8. D. Graham, J. A. Parkinson and T. Brown, J. Chem. Soc., Perkin Trans. 1, 1998, 1131 RSC.
  9. E. Dias, J. L. Battiste and J. R. Williamson, J. Am. Chem. Soc., 1994, 116, 4479 CrossRef CAS.
  10. R. G. Eason, D. M. Burkhardt, S. J. Phillips, D. P. Smith and S. S. David, Nucleic Acids Res., 1996, 24, 890 CrossRef CAS.
  11. F. Seela and Y. Chen, Chem. Commun., 1996, 2263 RSC.
  12. F. Seela and H. Thomas, Helv. Chim. Acta, 1995, 78, 94 CrossRef CAS.
  13. N. Ramzaeva and F. Seela, Helv. Chim. Acta, 1996, 79, 1549 CrossRef CAS.
  14. N. Ramzaeva, C. Mittelbach and F. Seela, Helv. Chim. Acta, 1997, 80, 1809 CAS.
  15. F. Seela and G. Becher, Synthesis, 1998, 207 CrossRef CAS.
  16. F. Seela and K. Kaiser, Helv. Chim. Acta, 1988, 71, 1813 CAS.
  17. F. Seela and M. Zulauf, Chem. Eur. J., 1998, in the press Search PubMed.
  18. F. Seela, N. Ramzaeva and M. Zulauf, Nucleosides, Nucleotides, 1997, 16, 963 CAS.
  19. C. A. Buhr, R. W. Wagner, D. Grant and B. C. Froehler, Nucleic Acids Res., 1996, 24, 2974 CrossRef CAS.
  20. R. J. Bontemps, J. D. Anderson, D. F. Smee, A. Jin, H. A. Alaghammandan, B. S. Sharma, W. B. Jolley, R. K. Robins and H. B. Cottam, J. Med. Chem., 1990, 33, 2174 CrossRef.
  21. H. B. Cottam, C. R. Petrie, P. A. McKernan, R. J. Goebel, N. K. Dalley, R. B. Davidson, R. K. Robins and G. R. Revankar, J. Med. Chem., 1984, 27, 1119 CrossRef CAS.
  22. H. B. Cottam, D. B. Wasson, H. C. Shih, A. Raychaudhuri, G. DiPasquale and D. A. Carson, J. Med. Chem., 1993, 36, 3424 CrossRef CAS.
  23. C. R. Petrie III, H. B. Cottam, P. A. McKernan, R. K. Robins and G. R. Revankar, J. Med. Chem., 1985, 28, 1010 CrossRef.
  24. N. Sugimoto and T. Sato, Jap. Pat. 61 109 797, 1986 Search PubMed.
  25. C. R. Petrie, A. D. Adams, M. Stamm, J. van Ness, S. M. Watanabe and R. B. Meyer Jr., Bioconjugate Chem., 1991, 2, 441 CrossRef CAS.
  26. E. C. Taylor and H. H. Patel, Tetrahedron, 1992, 48, 8089 CrossRef CAS.
  27. F. Seela, M. Zulauf and G. Becher, Nucleosides, Nucleotides, 1997, 16, 305 CAS.
  28. F. Seela and H. Steker, Helv. Chim. Acta, 1985, 68, 563 CAS.
  29. M. Hoffer, Chem. Ber., 1960, 93, 2777 CrossRef CAS.
  30. F. Seela and H.-D. Winkeler, J. Org. Chem., 1983, 48, 3119 CrossRef CAS.
  31. F. W. Hobbs, J. Org. Chem., 1989, 54, 3420 CrossRef CAS.
  32. F. Seela and M. Zulauf, Synthesis, 1996, 726 CrossRef CAS.
  33. D. E. Bergstrom, A. J. Brattesani, M. K. Ogawa and M. J. Schweickert, J. Org. Chem., 1981, 46, 1423 CrossRef CAS.
  34. T. Sakamoto, Y. Kondo and H. Yamanaka, Chem. Pharm. Bull., 1982, 30, 2410 CAS.
  35. F. Seela and M. Zulauf, unpublished results.
  36. K.-Y. Lin, R. J. Jones and M. Matteucci, J. Am. Chem. Soc., 1995, 117, 3873 CrossRef CAS.
  37. M. Sekine, personal communication, 1998.
  38. H. Rosemeyer, K. Kaiser and F. Seela, J. Org. Chem., 1985, 50, 1847 CrossRef CAS.
  39. F. Seela and H. Steker, Helv. Chim. Acta, 1986, 69, 1602 CrossRef.
  40. F. Seela, M. Zulauf, R. Pawlak and H. Reuter, manuscript in preparation.
  41. H. Rosemeyer and F. Seela, J. Chem. Soc., Perkin Trans. 2, 1997, 2341 RSC.
  42. C. A. G. Haasnoot, F. A. A. M. deLeeuw and C. Altona, Tetrahedron, 1980, 86, 2783 CrossRef.
  43. J. van Wijk and C. Altona, PSEUROT 6.2—a program for the conformational analysis of five membered rings, University of Leiden, July 1993 Search PubMed.
  44. H. Rosemeyer, M. Zulauf, N. Ramzaeva, G. Becher, E. Feiling, K. Mühlegger, I. Münster, A. Lohmann and F. Seela, Nucleosides, Nucleotides, 1997, 16, 821 CAS.
Click here to see how this site uses Cookies. View our privacy policy here.