New metal-binding modes for 5-aminoorotic acid: preparation, characterization and crystal structures of zinc(II) complexes

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Nikolia Lalioti, Catherine P. Raptopoulou, Aris Terzis, Athanassios Panagiotopoulos, Spyros P. Perlepes and Evy Manessi-Zoupa


Abstract

Treatment of ZnCl2 with 2 equivalents of 5-aminoorotic acid (5-amino-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid, H4L) and 2 equivalents of NaOH in water–methanol yielded a mixture of crystals and powder of complexes [{Zn(H2L)(H2O)2}n] 1 and [Zn(H3L)2(H2O)4] 2, respectively. A good yield (ca. 70%) of pure 2 can be obtained by the reaction of Zn(O2CMe)2·2H2O and 2 equivalents of H4L in refluxing water. The crystal structure of 1 consists of neutral octahedral [Zn(H2L)(H2O)2] units which form polymer chains along the b axis; H2L2– behaves as a bis(bidentate) bridging ligand co-ordinating to two zinc atoms via the amino nitrogen, the oxygen of the neutral carboxamide group, the deprotonated carboxamide nitrogen and one of the carboxylate oxygens and forming two five-membered chelate rings. The 1H NMR spectra of 1 in (CD3)2SO at 290 and 310 K suggest that its solid-state structure is not retained in solution. Slow crystallization of 1 or 2 from dmso solutions yielded crystals of the monomeric octahedral complex [Zn(H3L)2(dmso)2(H2O)2] 3 the structure of which was solved by single-crystal X-ray crystallography. The monoanion H3L utilizes only one carboxylate oxygen for metal binding in the centrosymmetric complex 3. The difference in anionic charge and co-ordination mode between H2L2– and H3L leads to different hydrogen-bonded supramolecular structures for 1 and 3. The IR and 1H NMR spectra of the prepared complexes are discussed.


References

  1. M. Ruf, K. Weiss and H. Vahrenkamp, Inorg. Chem., 1997, 36, 2130 CrossRef CAS.
  2. I. Mutikainen, R. Hämäläinen, M. Klinga, O. Orama and U. Turpeinen, Acta Crystallogr., Sect. C, 1996, 52, 2480 CrossRef.
  3. A. D. Burrows, D. M. P. Mingos, A. J. P. White and D. J. Williams, J. Chem. Soc., Dalton Trans., 1996, 149 RSC.
  4. F. Nepveu, N. Gaultier, N. Korber, J. Jaud and P. Castan, J. Chem. Soc., Dalton Trans., 1995, 4005 RSC.
  5. U. Hartmann, R. Gregorzik and H. Vahrenkamp, Chem. Ber., 1994, 127, 2123 CAS.
  6. O. Kumberger, J. Riede and H. Schmidbaur, Z. Naturforsch., Teil B, 1993, 48, 961 CAS.
  7. O. Kumberger, J. Riede and H. Schmidbaur, Chem. Ber, 1991, 124, 2739 CAS.
  8. I. Bach, O. Kumberger and H. Schmidbaur, Chem. Ber, 1990, 123, 2267 CAS.
  9. I. Mutikainen, Inorg. Chim. Acta, 1987, 136, 155 CrossRef CAS.
  10. I. Mutikainen, Recl. Trav. Chim. Pays-Bas, 1987, 106, 438.
  11. D. Mentzafos, N. Katsaros and A. Terzis, Acta Crystallogr., Sect. C, 1987, 43, 1905 CrossRef.
  12. A. Karipides and B. Thomas, Acta Crystallogr., Sect. C, 1986, 42, 1705 CrossRef.
  13. I. Mutikainen, Finn. Chem. Lett., 1985, 193 Search PubMed.
  14. P. Arrizabalaga, P. Castan and J.-P. Laurent, J. Inorg. Biochem., 1984, 20, 215 CrossRef CAS.
  15. P. Arrizabalaga, P. Castan and J.-P. Laurent, Inorg. Chim. Acta, 1984, 92, 203 CrossRef CAS.
  16. P. Arrizabalaga, P. Castan and J.-P. Laurent, J. Am. Chem. Soc., 1984, 106, 4814 CrossRef CAS.
  17. G. Dodin and J.-E. Dubois, J. Am. Chem. Soc., 1980, 102, 3049 CrossRef CAS.
  18. I. Mutikainen and P. Lumme, Acta Crystallogr., Sect. B, 1980, 36, 2233 CrossRef.
  19. M. Sabat, D. Zglinska and B. Jezowska-Trzebiatowska, Acta Crystallogr., Sect. B, 1980, 36, 1187 CrossRef.
  20. J. Leberman, A. Kornberg and E. S. Simms, J. Biol. Chem., 1955, 215, 403 CAS.
  21. A. Lehninger, in Principles of Biochemistry, Worth Publishers Inc, New York, 1970, p. 661 Search PubMed.
  22. J. Victor, L. B. Greenberg and D. L. Sloan, J. Biol. Chem., 1979, 254, 2647 CAS.
  23. E. G. Sander, L. D. Wright and D. B. McCormick, J. Biol. Chem., 1965, 240, 3628 CAS.
  24. R. I. Christopherson and S. D. Lyons, Med. Res. Rev., 1990, 10, 505 CAS.
  25. R. E. Kelly, M. I. Mally and D. R. Evans, J. Biol. Chem., 1986, 261, 6073 CAS.
  26. H. Schmidbaur, H.-G. Classen and J. Helbig, Angew. Chem., Int. Ed. Engl., 1990, 29, 1090 CrossRef.
  27. D. Szeleny and J. Sos, Arzneim-Forsch., 1971, 21, 777 Search PubMed.
  28. T. Solin, K. Matsumoto and K. Fuwa, Bull. Chem. Soc. Jpn., 1981, 54, 3731 CAS.
  29. K. Matsumoto, Inorg. Chim. Acta, 1988, 151, 9 CrossRef CAS.
  30. A. D. Burrows, C.-W. Chan, M. M. Chowdhry, J. E. McGrady and D. M. P. Mingos, Chem. Soc. Rev., 1995, 329 RSC.
  31. E. J. Baran, R. C. Mercader, F. Hueso-Urena, M. N. Moreno-Carretero, M. Quiros-Olozabal and J. M. Salas-Peregrin, Polyhedron, 1996, 15, 1717 CrossRef CAS and refs. therein.
  32. F. Hueso-Urena, M. N. Moreno-Carretero, J. M. Salas-Peregrin and G. A. de Cienfuegos-López, Transition Met. Chem., 1995, 20, 262 CAS.
  33. T. W. Hambley, R. I. Christopherson and E. S. Zvargulis, Inorg. Chem., 1995, 34, 6550 CrossRef CAS.
  34. G. Maistralis, N. Katsaros, S. P. Perlepes and D. Kovala-Demertzi, J. Inorg. Biochem., 1992, 45, 1 CrossRef CAS.
  35. M. S. Garcia-Tasende, B. E. Rivero, A. Castineiras, A. Sanchez, J. S. Casas, J. Sordo, W. Hiller and J. Strahle, Inorg. Chim. Acta, 1991, 181, 43 CrossRef CAS.
  36. S. P. Perlepes, V. Lazaridou, B. Sankhla and J. M. Tsangaris, Bull. Soc. Chim. Fr., 1990, 127, 597.
  37. F. Hueso-Urena, M. N. Moreno-Carretero, J. M. Salas-Peregrin, C. Valenzuela-Calahorro and G. A. de Cienfuegos-López, Thermochim. Acta, 1988, 133, 341 CrossRef CAS.
  38. P. Arrizabalaga, P. Castan and F. Dahan, Inorg. Chem., 1983, 22, 2245 CrossRef CAS.
  39. D. Lalart, G. Dodin and J.-E. Dubois, J. Chim. Phys., 1982, 79, 449 CAS.
  40. B. Roy, A. K. Singh and R. P. Singh, Talanta, 1983, 30, 617 CrossRef CAS.
  41. A. D. Burrows, D. M. P. Mingos, A. J. P. White and D. J. Williams, J. Chem. Soc., Dalton Trans., 1996, 3805 RSC.
  42. C. K. Johnson, ORTEP, Report ORNL-5138, Oak Ridge National Laboratory, Oak Ridge, TN, 1976.
  43. G. Laughlan, A. I. H. Murchie, D. G. Norman, M. H. Moore, P. C. E. Moody, D. M. J. Lilley and B. Luisi, Science, 1994, 265, 520 CrossRef CAS.
  44. F. Hueso-Urena, M. N. Moreno-Carretero, M. A. Romero-Molina, J. M. Salas-Peregrin, M. P. Sanchez-Sanchez, G. A. de Cienfuegos-López and R. Faure, J. Inorg. Biochem., 1993, 51, 613 CrossRef.
  45. L. S. Gelfand, F. J. Iaconianni, L. L. Pytlewski, A. N. Speca, C. M. Mikulski and N. M. Karayannis, J. Inorg. Nucl. Chem., 1980, 42, 377 CrossRef CAS.
  46. G. B. Deacon and R. J. Phillips, Coord. Chem. Rev., 1980, 33, 227 CrossRef CAS.
  47. S. P. Perlepes, E. Libby, W. E. Streib, K. Folting and G. Christou, Polyhedron, 1992, 11, 923 CrossRef CAS.
  48. X. Chen, S. Zhan, C. Hu, Q. Meng and Y. Liu, J. Chem. Soc., Dalton Trans., 1997, 245 RSC.
  49. R. J. Abraham and P. Loftus, Proton and Carbon-13 NMR Spectroscopy, Heyden, London, 1978, pp. 23, 24, 165–168 Search PubMed.
  50. L. M. Jackman and S. Sternhel, in Applications of Nuclear Magnetic Spectroscopy in Organic Chemistry, International Series of Monographs in Organic Chemistry, Pergamon, Oxford, 2nd edn., 1969, vol. 5, pp. 53–60, 103, 104, 215–218, 359, 360, 380–384 Search PubMed.
  51. G. M. Sheldrick, SHELXS 86, University of Göttingen, 1986.
  52. G. M. Sheldrick, SHELXL 93, University of Göttingen, 1993.
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