NMR evidence for the nucleation of a β-hairpin peptide conformation in water by an Asn-Gly type I′ β-turn sequence

(Note: The full text of this document is currently only available in the PDF Version )

Samuel R. Griffiths-Jones, Allister J. Maynard and Gary J. Sharman


Abstract

The contribution of the β-turn sequence to the folding and stability of a peptide β-hairpin in water has been analysed from studies of a truncated peptide lacking one β-strand and hence the majority of the interstrand hydrophobic interactions; NMR analysis shows that the Asn-Gly type I′ β-turn conformation is significantly populated, suggesting that the intrinsic conformation preference of the turn sequence may play an important role in nucleating hairpin folding.


References

  1. K. L. Constantine, L. Mueller, N. H. Andersen, H. Tong, C. F. Wandler, M. S. Friedrichs and R. E. Bruccoleri, J. Am. Chem. Soc., 1995, 117, 10841 CrossRef CAS.
  2. M. S. Searle, D. H. Williams and L. C. Packman, Nat. Struct. Biol., 1995, 2, 999 CrossRef CAS.
  3. M. Ramirez-Alvarado, F. J. Blanco and L. Serrano, Nat. Struct. Biol., 1996, 3, 604 CrossRef CAS.
  4. E. De Alba, M. A. Jimenez and M. Rico, J. Am. Chem. Soc., 1997, 119, 175 CrossRef.
  5. T. S. Haque and S. H. Gellman, J. Am. Chem. Soc., 1997, 119, 2303 CrossRef CAS.
  6. J. D. Puglisi, L. Chen, S. Blanchard and A. D. Frankel, Science, 1995, 270, 1200.
  7. X. M. Ye, R. A. Kumar and D. J. Patel, Chem. Biol., 1995, 2, 827 CrossRef CAS.
  8. A. J. Maynard and M. S. Searle, Chem. Commun., 1997, 1297 RSC; A. J. Maynard, G. J. Sharman and M. S. Searle, J. Am. Chem. Soc., 1998, in the press Search PubMed.
  9. E. G. Hutchinson and J. M. Thornton, Protein Sci., 1994, 3, 2207 CrossRef CAS.
  10. B. L. Sibanda and J. M. Thornton, Methods Enzymol., 1991, 202, 59 CAS.
  11. R. L. Baldwin, Proc. Natl. Acad. Sci. USA, 1986, 83, 8069 CAS; K. P. Murphy, P. L. Privalov and S. J. Gill, Science, 1990, 247, 559 CAS; K. P. Murphy and S. J. Gill, J. Mol. Biol., 1991, 222, 699 CAS.
  12. L. J. Smith, K. M. Fiebig, H. Schwalbe and C. M. Dobson, Folding Des., 1996, 1, R95 Search PubMed.
Click here to see how this site uses Cookies. View our privacy policy here.