Issue 8, 2012

Critical effects of alkyl chain length on fibril structures in benzene-trans(RR)- or (SS)-N,N′-alkanoyl-1,2-diaminocyclohexane gels

Abstract

Vibrational circular dichroism (VCD) spectra were recorded on benzene-d6 gels formed by chiral low molecular mass gelators (LMGs), trans(RR)- or trans(SS)-N,N′-alkanoyl-1,2-diaminocyclohexane (denoted by RR-Cn or SS-Cn, respectively; n = the number of carbon atoms in an introduced alkanoyl group). Attention was focused on the effects of alkyl chain length on the structures of the gels. When n was changed from 6 to 12, the signs of the coupled peaks around 1550 cm−1 in the VCD spectra, which were assigned to the symmetric and asymmetric C[double bond, length as m-dash]O stretching vibrations from the higher to lower wavenumber, respectively, critically depended on the alkyl chain length. In the case of RR-Cn, for example, the signs of the couplet were plus and minus for n = 8, 9, 10 and 12, while the signs of the same couplet were reversed for n = 6 and 7. The conformations of LMGs in fibrils were determined by comparing the observed IR and VCD spectra with those calculated for a monomeric molecule. The observed reversal of signs in the C[double bond, length as m-dash]O couplet was rationalized in terms of the different modes of hydrogen bonding. In the case of C8, C9, C10 and C12, gelator molecules were stacked with their cyclohexyl rings in parallel, forming double anti-parallel chains of intermolecular hydrogen bonds using two pairs of >NH and >C[double bond, length as m-dash]O groups. In case of C6 and C7, gelator molecules were stacked through a single chain of intermolecular hydrogen bonds using a pair of >NH and >C[double bond, length as m-dash]O groups. The remaining pair of >NH and >C[double bond, length as m-dash]O groups formed an intramolecular hydrogen bond.

Graphical abstract: Critical effects of alkyl chain length on fibril structures in benzene-trans(RR)- or (SS)-N,N′-alkanoyl-1,2-diaminocyclohexane gels

Supplementary files

Article information

Article type
Paper
Submitted
25 Aug 2011
Accepted
15 Nov 2011
First published
05 Jan 2012

Org. Biomol. Chem., 2012,10, 1581-1586

Critical effects of alkyl chain length on fibril structures in benzene-trans(RR)- or (SS)-N,N′-alkanoyl-1,2-diaminocyclohexane gels

H. Sato, T. Nakae, K. Morimoto and K. Tamura, Org. Biomol. Chem., 2012, 10, 1581 DOI: 10.1039/C1OB06460F

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