Issue 37, 2011

Characteristics of CO32–water hydrogen bonds in aqueous solution: insights from HF/MM and B3LYP/MM MD simulations

Abstract

Two combined quantum mechanics/molecular mechanics (QM/MM) molecular dynamics simulations, namely HF/MM and B3LYP/MM, have been performed to investigate the local hydration structure and dynamics of carbonate (CO32) in dilute aqueous solution. With respect to the QM/MM scheme, the QM region, which contains the CO32 and its surrounding water molecules, was treated at HF and B3LYP levels of accuracy, respectively, using the DZV+ basis set, while the rest of the system is described by classical MM potentials. For both the HF/MM and B3LYP/MM simulations, it is observed that the hydrogen bonds between CO32 oxygens and their nearest-neighbor waters are relatively strong, i.e., compared to waterwater hydrogen bonds in the bulk, and that the first shell of each CO32oxygen atom somewhat overlaps with the others, which allows migration of water molecules among the coordinating sites to exist. In addition, it is observed that first-shell waters are either “loosely” or “tightly” bound to the respective CO32oxygen atoms, leading to large fluctuations in the number of first-shell waters, ranging from 1 to 6 (HF/MM) and 2 to 7 (B3LYP/MM), with the prevalent value of 3. Upon comparing the HF and B3LYP methods in describing this hydrated ion, the latter is found to overestimate the hydrogen-bond strength in the CO32–water complexes, resulting in a slightly more compact hydration structure at each of the CO32 oxygens.

Graphical abstract: Characteristics of CO32−–water hydrogen bonds in aqueous solution: insights from HF/MM and B3LYP/MM MD simulations

Article information

Article type
Paper
Submitted
03 Jun 2011
Accepted
03 Aug 2011
First published
23 Aug 2011

Phys. Chem. Chem. Phys., 2011,13, 16851-16860

Characteristics of CO32water hydrogen bonds in aqueous solution: insights from HF/MM and B3LYP/MM MD simulations

A. Tongraar, P. Yotmanee and A. Payaka, Phys. Chem. Chem. Phys., 2011, 13, 16851 DOI: 10.1039/C1CP21802F

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