Issue 25, 2024

There and back again: bridging meso- and nano-scales to understand lipid vesicle patterning

Abstract

We describe a complete methodology to bridge the scales between nanoscale molecular dynamics and (micrometer) mesoscale Monte Carlo simulations in lipid membranes and vesicles undergoing phase separation, in which curving molecular species are furthermore embedded. To go from the molecular to the mesoscale, we notably appeal to physical renormalization arguments enabling us to rigorously infer the mesoscale interaction parameters from its molecular counterpart. We also explain how to deal with the physical timescales at stake at the mesoscale. Simulating the as-obtained mesoscale system enables us to equilibrate the long wavelengths of the vesicles of interest, up to the vesicle size. Conversely, we then backmap from the meso- to the nano-scale, which enables us to equilibrate in turn the short wavelengths down to the molecular length-scales. By applying our approach to the specific situation of patterning a vesicle membrane, we show that macroscopic membranes can thus be equilibrated at all length-scales in achievable computational time offering an original strategy to address the fundamental challenge of timescale in simulations of large bio-membrane systems.

Graphical abstract: There and back again: bridging meso- and nano-scales to understand lipid vesicle patterning

Supplementary files

Article information

Article type
Paper
Submitted
20 Jan 2024
Accepted
12 May 2024
First published
22 May 2024
This article is Open Access
Creative Commons BY-NC license

Soft Matter, 2024,20, 4998-5013

There and back again: bridging meso- and nano-scales to understand lipid vesicle patterning

J. Cornet, N. Coulonges, W. Pezeshkian, M. Penissat-Mahaut, H. Desgrez-Dautet, S. J. Marrink, N. Destainville, M. Chavent and M. Manghi, Soft Matter, 2024, 20, 4998 DOI: 10.1039/D4SM00089G

This article is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported Licence. You can use material from this article in other publications, without requesting further permission from the RSC, provided that the correct acknowledgement is given and it is not used for commercial purposes.

To request permission to reproduce material from this article in a commercial publication, please go to the Copyright Clearance Center request page.

If you are an author contributing to an RSC publication, you do not need to request permission provided correct acknowledgement is given.

If you are the author of this article, you do not need to request permission to reproduce figures and diagrams provided correct acknowledgement is given. If you want to reproduce the whole article in a third-party commercial publication (excluding your thesis/dissertation for which permission is not required) please go to the Copyright Clearance Center request page.

Read more about how to correctly acknowledge RSC content.

Social activity

Spotlight

Advertisements