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Topological Prediction of Palladium Coordination Cages

Abstract

The preparation of functionalized, heteroleptic PdxL2x coordination cages is desirable for catalytic and optoelectronic applications. Current rational design of these cages uses the angle between metal-binding (∠B) sites of the di(pyridyl)arene linker to predict the topology of homoleptic cages obtained via non-covalent chemistry. However, this model neglects the contributions of steric bulk between the pyridyl residues—a prerequisite for endohedrally functionalized cages, and fails to rationalize heteroleptic cages. We describe a classical mechanics (CM) approach to predict the topological outcomes of PdxL2x coordination cage formation with arbitrary linker combinations, accounting for the electronic effects of coordination and steric effects of linker structure. Initial validation of our CM method with reported homoleptic Pd12LFu24 (LFu = 2,5-bis(pyridyl)furan) assembly suggested the formation of a minor topology Pd15LFu30, identified experimentally by mass spectrometry. Application to heteroleptic cage systems employing mixtures of LFu (∠B = 127°) and its thiophene congener LTh (∠B = 149° ∠Bexp = 152.4°) enabled prediction of Pd12L24 and Pd24L48 coordination cages formation, reliably emulating experimental data. Finally, the topological outcome for exohedrally (LEx) and endohedrally (LEn) functionalized heteroleptic PdxL2x coordination cages were predicted to assess the effect of steric bulk on both topological outcomes and coordination cage yields, with comparisons drawn to experimental data.

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Supplementary files

Article information


Submitted
21 Jul 2020
Accepted
15 Oct 2020
First published
16 Oct 2020

This article is Open Access
All publication charges for this article have been paid for by the Royal Society of Chemistry

Chem. Sci., 2020, Accepted Manuscript
Article type
Edge Article

Topological Prediction of Palladium Coordination Cages

D. Poole, E. Bobylev, S. Mathew and J. N. H. Reek, Chem. Sci., 2020, Accepted Manuscript , DOI: 10.1039/D0SC03992F

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