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Exploring short strong hydrogen bonds engineered in organic acid molecular crystals for temperature dependent proton migration behaviour using single crystal synchrotron X-ray diffraction (SCSXRD)

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Abstract

Seven multi-component molecular crystals containing O–H⋯O/O+–H⋯O and N+–H⋯O short strong hydrogen bonds (SSHBs) have been engineered by combining substituted organic acids with hydrogen bond acceptor molecules N,N-dimethylurea and isonicotinamide. In these materials, the shortest of the SSHBs are formed in the N,N-dimethylurea set for the ortho/para nitro-substituted organic acids whilst a twisted molecular approach favours the shorter SSHBs N+–H⋯O in the isonicotinamide set. Temperature dependent proton migration behaviour has been explored in these systems using single crystal synchrotron X-ray diffraction (SCSXRD). By using a protocol which considers a combination of structural information when assessing the hydrogen atom (H-atom) behaviour, including refined H-atom positions alongside heavy atom geometry and Fourier difference maps, temperature dependent proton migration is indicated in two complexes (2: N,N-dimethylurea 2,4-dinitrobenzoic acid 1 : 1 and 5: isonicotinamide phthalic acid 2 : 1). We also implement Hirshfeld atom refinement for further confidence in this observation; this highlights the importance of having corroborating trends when applying the SCSXRD technique in these studies. Further insights into the SSHB donor–acceptor distance limit for temperature dependent proton migration are also revealed. For the O–H⋯O/O+–H⋯O SSHBs, the systems here support the previously proposed maximum limit of 2.45 Å whilst for the charge assisted N+–H⋯O SSHBs, a limit in the region of 2.55 Å may be suggested.

Graphical abstract: Exploring short strong hydrogen bonds engineered in organic acid molecular crystals for temperature dependent proton migration behaviour using single crystal synchrotron X-ray diffraction (SCSXRD)

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Publication details

The article was received on 14 Jun 2019, accepted on 29 Jul 2019 and first published on 12 Aug 2019


Article type: Paper
DOI: 10.1039/C9CE00925F
CrystEngComm, 2019, Advance Article
  • Open access: Creative Commons BY license
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    Exploring short strong hydrogen bonds engineered in organic acid molecular crystals for temperature dependent proton migration behaviour using single crystal synchrotron X-ray diffraction (SCSXRD)

    L. K. Saunders, H. Nowell, L. E. Hatcher, H. J. Shepherd, S. J. Teat, D. R. Allan, P. R. Raithby and C. C. Wilson, CrystEngComm, 2019, Advance Article , DOI: 10.1039/C9CE00925F

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