Issue 27, 2017

Water–chromophore electron transfer determines the photochemistry of cytosine and cytidine

Abstract

Many of the UV-induced phenomena observed experimentally for aqueous cytidine were lacking the mechanistic interpretation for decades. These processes include the substantial population of the puzzling long-lived dark state, photohydration, cytidine to uridine conversion and oxazolidinone formation. Here, we present quantum-chemical simulations of excited-state spectra and potential energy surfaces of N1-methylcytosine clustered with two water molecules using the second-order approximate coupled cluster (CC2), complete active space with second-order perturbation theory (CASPT2), and multireference configuration interaction with single and double excitation (MR-CISD) methods. We argue that the assignment of the long-lived dark state to a singlet nπ* excitation involving water–chromophore electron transfer might serve as an explanation for the numerous experimental observations. While our simulated spectra for the Image ID:c7cp02635h-t1.gif state are in excellent agreement with experimentally acquired data, the electron-driven proton transfer process occurring on the Image ID:c7cp02635h-t2.gif surface may initiate the subsequent damage in the vibrationally hot ground state of the chromophore.

Graphical abstract: Water–chromophore electron transfer determines the photochemistry of cytosine and cytidine

Supplementary files

Article information

Article type
Communication
Submitted
21 Apr 2017
Accepted
21 Jun 2017
First published
21 Jun 2017

Phys. Chem. Chem. Phys., 2017,19, 17531-17537

Water–chromophore electron transfer determines the photochemistry of cytosine and cytidine

R. Szabla, H. Kruse, J. Šponer and R. W. Góra, Phys. Chem. Chem. Phys., 2017, 19, 17531 DOI: 10.1039/C7CP02635H

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