Probing the electronic and mechanistic roles of the μ4-sulfur atom in a synthetic CuZ model system

Abstract

Nitrous oxide (N₂O) contributes significantly to ozone layer depletion and is a potent greenhouse agent, motivating interest in the chemical details of biological N₂O fixation by nitrous oxide reductase (N₂OR) during bacterial denitrification. In this study, we report a combined experimental/computational study of a synthetic [4Cu:1S] cluster supported by N-donor ligands that can be considered the closest structural and functional mimic of the Cu_Z catalytic site in N₂OR reported to date. Quantitative N₂ measurements during synthetic N₂O reduction were used to determine reaction stoichiometry, which in turn was used as the basis for density functional theory (DFT) modeling of hypothetical reaction intermediates. The mechanism for N₂O reduction emerging from this computational modeling involves cooperative activation of N₂O across a Cu/S cluster edge. Direct interaction of the μ₄-S ligand with the N₂O substrate during coordination and N–O bond cleavage represents an unconventional mechanistic paradigm to be considered for the chemistry of Cu_Z and related metal–sulfur clusters. Consistent with hypothetical participation of the μ₄-S unit in two-electron reduction of N₂O, Cu K-edge and S K-edge X-ray absorption spectroscopy (XAS) reveal a high degree of participation by the μ₄-S in redox changes, with approximately 21% S 3p contribution to the redox-active molecular orbital in the highly covalent [4Cu:1S] core, compared to approximately 14% Cu 3d contribution per copper. The XAS data included in this study represent the first spectroscopic interrogation of multiple redox levels of a [4Cu:1S] cluster and show high fidelity to the biological Cu_Z site.