Unraveling multiple binding modes of acridine orange to DNA using a multispectroscopic approach

Mhejabeen Sayed, Bhavana Krishnamurthy and Haridas Pal

Phys. Chem. Chem. Phys., 2016, 18, 24642
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Assessment of DNA-binding affinity of cholinesterase reactivators and electrophoretic determination of their effect on topoisomerase I and II activity

J Janockova, E Zilecka, J Kasparkova, V Brabec, O Soukup, K Kuca and M Kozurkova

Molecular BioSystems, 2016, 12, 2910
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Novel poly(ADP-ribose) polymerase inhibitor veliparib: biophysical studies on its binding to calf thymus DNA

Hongqin Yang, Peixiao Tang, Bin Tang, Yanmei Huang, Xinnuo Xiong and Hui Li

RSC Adv., 2017, 7, 10242
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Determination of the DNA binding properties of a novel PARP inhibitor MK-4827 with calf-thymus DNA by molecular simulations and detailed spectroscopic investigations

Hongqin Yang, Qingle Zeng, Ze He, Di Wu and Hui Li

New J. Chem., 2019, 43, 6702
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A DNA small molecular probe with increasing K+ concentration promoted selectivity

Ya-Ping Gong, Jian Yang, Ji-Wang Fang, Qian Li, Zhi-Yong Yu, Aijiao Guan and Han-Yuan Gong

RSC Adv., 2021, 11, 15030
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N,N′,N′′-Trisubstituted guanidine derivatives as DNA-intercalators: synthesis, crystal structures and biophysical investigations

R. Durga Priyadharshini, P. N. Sathishkumar, M. Bensingh, N. Bhuvanesh, K. N. Vennila, R. Karvembu and Kuppanagounder P. Elango

New J. Chem., 2023, 47, 14185
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Naproxen Derivative Interaction Properties with ct-DNA

Nuriye Akbay, Zeynep Koksal, Tugba Taskin-Tok and Ayse UZGOREN-BARAN

Hacettepe Journal of Biology and Chemistry, 2019, 47, 177
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Deciphering the mechanism of interaction of edifenphos with calf thymus DNA

Ajaz Ahmad and Masood Ahmad

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2018, 188, 244
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Comparative study of two cephalosporin antibiotics binding to calf thymus DNA by multispectroscopy, electrochemistry, and molecular docking

Sheng‐Chao Huang, Li‐Yang Cheng, Jing Yang and Yan‐Jun Hu

Luminescence, 2020, 35, 52
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Studies of DNA-binding properties of lafutidine as adjuvant anticancer agent to calf thymus DNA using multi-spectroscopic approaches, NMR relaxation data, molecular docking and dynamical simulation

Hongqin Yang, Peixiao Tang, Bin Tang, Yanmei Huang, Jiawei He, Shanshan Li and Hui Li

International Journal of Biological Macromolecules, 2017, 99, 79
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Interaction of an abiraterone with calf thymus DNA: Investigation with spectroscopic technique and modelling studies

Tanveer A. Wani, Nawaf Alsaif, Ahmed H. Bakheit, Seema Zargar, Abdurrahman A. Al-Mehizia and Azmat Ali Khan

Bioorganic Chemistry, 2020, 100, 103957
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Spectroscopic and theoretical evidences for the surface binding of voglibose drug with DNA

R. Durga Priyadharshini, S. Ponkarpagam, K.N. Vennila and Kuppanagounder P. Elango

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2022, 271, 120888
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Studies on biomarkers of oxidative stress and associated genotoxicity and histopathology in Channa punctatus from heavy metal polluted canal

Mehjbeen Javed, Irshad Ahmad, Nazura Usmani and Masood Ahmad

Chemosphere, 2016, 151, 210
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Pendimethalin ve Salisilik Asit Uygulamalarının Carthamus tinctorius L. cv. “Remzibey” Yağ Asidi Desatüraz Genlerinin Anlatımı Üzerine Etkisi

Ekrem AKBULUT

Iğdır Üniversitesi Fen Bilimleri Enstitüsü Dergisi, 2020, 10, 2915
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Toxicity assessment of carmine and its interaction with calf thymus DNA

Amin Arif, Ajaz Ahmad and Masood Ahmad

Journal of Biomolecular Structure and Dynamics, 2021, 39, 5861
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Investigating binding of insecticide buprofezin to DNA by experimental and metadynamics simulation studies

S. Ponkarpagam, K. N. Vennila and Kuppanagounder P. Elango

Journal of Biomolecular Structure and Dynamics, 2023, 41, 3476
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DNA‐Targeted NO Release Photoregulated by Green Light

Cristina Parisi, Aurore Fraix, Stefano Guglielmo, Francesca Spyrakis, Barbara Rolando, Loretta Lazzarato, Roberta Fruttero, Alberto Gasco and Salvatore Sortino

Chemistry A European J, 2020, 26, 13627
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Characterizing the binding of tert-butylhydroquinone and its oxidation product tert-butylquinone with calf thymus DNA in vitro

Rui Wang, Na Li, Xing Hu, Junhui Pan, Guowen Zhang, Xinan Zeng and Deming Gong

Journal of Molecular Liquids, 2020, 302, 112338
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Heavy metal pollution and risk assessment by the battery of toxicity tests

Mohd. Shahnawaz Khan, Mehjbeen Javed, Md. Tabish Rehman, Maryam Urooj and Md. Irshad Ahmad

Sci Rep, 2020, 10
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Study the interaction between juglone and calf thymus DNA by spectroscopic and molecular docking techniques

Bingjun Shen, Huiru Yang, Jiaqi Chen, Xiaoyun Liu and Mingyue Zhou

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2021, 261, 119998
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A facile & convenient route for the stereoselective synthesis of Z- isoxazol-5(4H)-ones derivatives catalysed by sodium acetate: Synthesis, multispectroscopic properties, crystal structure with DFT calculations, DNA-binding studies and molecular docking studies

Mehtab Parveen, Afroz Aslam, Ajaz Ahmad, Mahboob Alam, Manuela Ramos Silva and P.S. Pereira Silva

Journal of Molecular Structure, 2020, 1200, 127067
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Insight into the binding interactions of fluorenone-pendent Schiff base with calf thymus DNA

Neha and Navneet Kaur

Analytical Biochemistry, 2023, 675, 115216
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Pendimethalin-based herbicide impairs cellular immune response and haemocyte morphology in a beneficial ground beetle

Maria Luigia Vommaro, Piero Giulio Giulianini and Anita Giglio

Journal of Insect Physiology, 2021, 131, 104236
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Assessment of the mutagenicity of the technical product of N-(1-ethylpropyl)-2,6-dinitro -3,4-xylidinen

О. В. Егорова, Наталия Алексеевна Илюшина, Н. С. Аверьянова, Г. В. Масальцев and О. О. Дмитричева

Hygiene and sanitation, 2020, 99, 418
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A closer look at the mode of binding of drug pemetrexed with CT-DNA

S. Ponkarpagam, K. N. Vennila and Kuppanagounder P. Elango

Journal of Biomolecular Structure and Dynamics, 2023, 41, 3553
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Binding studies of sertraline hydrochloride with CT-DNA using experimental and computational techniques

Palak Sharma, Priyanka Gopi, Shweta Singh, Majji Sai Sudha Rani and Prateek Pandya

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2023, 300, 122910
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Exploring the binding interaction of Maillard reaction by‐product 5‐hydroxymethyl‐2‐furaldehyde with calf thymus DNA

Zhisheng Zhou, Xing Hu, Guowen Zhang, Rui Wang and Deming Gong

J Sci Food Agric, 2019, 99, 3192
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Revealing the groove binding characteristics of plant growth regulator 3-indoleacetic acid with calf thymus DNA

Miao Zhu, Xing Hu, Ying Zhang, Junhui Pan and Guowen Zhang

Journal of Molecular Liquids, 2021, 326, 115265
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Experimental and Computational Studies on the Interaction between DNA and BSA with a Couple of Isomeric [Pd(daf)(Leu)]+, and [Pd(daf)(Ile)]+ Antitumor Complexes, Their Synthesis and Spectral Characterization

Ameneh Heidari, Hassan Mansouri-Torshizi, Maryam Saeidifar and Khatereh Abdi

Bulletin of the Chemical Society of Japan, 2021, 94, 2678
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Study on the substitution effects of zinc benzoate terpyridine complexes on photoluminescence, antiproliferative potential and DNA binding properties

Jinzhang Jiang, Jiahe Li, Chengzhang Liu, Rongping Liu, Xing Liang, Yanling Zhou, Lixia Pan, Hailan Chen and Zhen Ma

J Biol Inorg Chem, 2020, 25, 311
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In vitro DNA binding studies of lenalidomide using spectroscopic in combination with molecular docking techniques

Liang Xu, Yan-Xi Hu, Yan-Cheng Li, Li Zhang, Hai-Xin Ai, Yu-Feng Liu and Hong-Sheng Liu

Journal of Molecular Structure, 2018, 1154, 9
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Intercalation of anticancer drug Palbociclib with calf-thymus DNA: new insights from molecular spectroscopic, molecular dynamic simulations and cleavage studies

R. Durga Priyadharshini, R. Jeyashree, R. Preethi, K. N. Vennila and Kuppanagounder P. Elango

Journal of Biomolecular Structure and Dynamics, 2024, 42, 1932
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Unintended effects of herbicide exposure on non-target beetle Zygogramma bicolorata Pallister, 1953, a bio-control agent of Parthenium hysterophorus weed

Neha Singh, Nikhil Maheshwari and Ayesha Qamar

JoBAZ, 2024, 85
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Deciphering the DNA-binding affinity, cytotoxicity and apoptosis induce as the anticancer mechanism of Bavachinin: An experimental and computational investigation

Mahvash Farajzadeh Dehkordi, Sadegh Farhadian, Mohammad Abdolvand, Ehsan Heidari Soureshjani, Babak Rahmani and Sina Darzi

Journal of Molecular Liquids, 2021, 341, 117373
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Current status of pesticide effects on environment, human health and it’s eco-friendly management as bioremediation: A comprehensive review

Vinay Mohan Pathak, Vijay K. Verma, Balwant Singh Rawat, Baljinder Kaur, Neelesh Babu, Akansha Sharma, Seeta Dewali, Monika Yadav, Reshma Kumari, Sevaram Singh, Asutosh Mohapatra, Varsha Pandey, Nitika Rana and Jose Maria Cunill

Front. Microbiol., 2022, 13
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Deciphering the interaction of methotrexate with DNA: Spectroscopic and molecular docking study

Cheng-Zhang Yang, Chun-Yan Liang, Di Zhang and Yan-Jun Hu

Journal of Molecular Liquids, 2017, 248, 1
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Spectroscopic investigations on DNA binding profile of two new naphthyridine carboxamides and their application as turn-on fluorescent DNA staining probes

G. Mahalakshmi, K. N. Vennila, B. Selvakumar, P. Lakshmana Rao, Ruchi Malwade, Sunny Deval, S. Madhuri, M. Seenivasaperumal and Kuppanagounder P. Elango

Journal of Biomolecular Structure and Dynamics, 2020, 38, 3443
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Studies on conformational changes induced by binding of pendimethalin with human serum albumin

Md. Irshad Ahmad, Angamba Meetei Potshangbam, Mehjbeen Javed and Masood Ahmad

Chemosphere, 2020, 243, 125270
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Binding studies of guggulsterone-E to calf thymus DNA by multi-spectroscopic, calorimetric and molecular docking studies

Shoeb Ikhlas and Masood Ahmad

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2018, 190, 402
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Decrypting the Interaction Pattern of Piperlongumine with Calf Thymus DNA and Dodecamer D(Cgcgaattcgcg)2 B-Dna: Biophysical and Molecular Docking Analysis

Vaishali yadav, Anuja Krishnan, Mirza Sarwar Baig, Muhammed Majeed, Mahadeva Nayak and Divya Vohora

SSRN Journal, 2022
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Computational study involving identification of endocrine disrupting potential of herbicides: Its implication in TDS and cancer progression in CRPC patients

Md Irshad Ahmad, Afia Usman and Masood Ahmad

Chemosphere, 2017, 173, 395
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Effect of glycation on human serum albumin–zinc interaction: a biophysical study

Sarah Iqbal, Faizan Abul Qais, Md. Maroof Alam and Imrana Naseem

J Biol Inorg Chem, 2018, 23, 447
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Mode of interaction of altretamine with calf thymus DNA: biophysical insights

Sathi Goswami, Ritutama Ghosh, Pooja Prasanthan and Nand Kishore

Journal of Biomolecular Structure and Dynamics, 2023, 41, 3728
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Binding of Bisphenol-F, a bisphenol analogue, to calf thymus DNA by multi-spectroscopic and molecular docking studies

Afia Usman and Masood Ahmad

Chemosphere, 2017, 181, 536
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High-throughput method for screening pendimethalin-degrading bacteria from one microbial bank

Ya-Peng Peng, Liang Ma, Ying Huang, Ming-He Mo, Jian-Jin Liu and Tong Liu

FEMS Microbiology Letters, 2024, 371
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Genotoxic and epigenetic effects of diuron in the Pacific oyster: in vitro evidence of interaction between DNA damage and DNA methylation

Farida Akcha, Audrey Barranger and Evelyne Bachère

Environ Sci Pollut Res, 2021, 28, 8266
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Copper-mediated cyclization of thiosemicarbazones leading to 1,3,4-thiadiazoles: Structural elucidation, DFT calculations, in vitro biological evaluation and in silico evaluation studies

Vipin Manakkadan, Jebiti Haribabu, Vishnunarayanan Namboothiri Vadakkedathu Palakkeezhillam, Puthiyavalappil Rasin, Ramesh Vediyappan, Vaishnu Suresh Kumar, Mohit Garg, Nattamai Bhuvanesh and Anandaram Sreekanth

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2024, 313, 124117
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Integrated use of biomarkers to assess the impact of heavy metal pollution on Solea aegyptiaca fish in Lake Qarun

Asmaa M. El-Agri, Manal A. Emam, Hanan S. Gaber, Ekrami A. Hassan and Soha M. Hamdy

Environ Sci Eur, 2022, 34
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Elimination of Pendimethalin in Integrated Rice and Procambarus clarkii Breeding Models and Dietary Risk Assessments

Qiuhong Yang, Xiaohui Ai, Jing Dong, Yibin Yang, Shun Zhou, Yongtao Liu and Ning Xu

Foods, 2022, 11, 1300
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Continuous Agrochemical Treatments in Agroecosystems Can Modify the Effects of Pendimethalin-Based Herbicide Exposure on Immunocompetence of a Beneficial Ground Beetle

Anita Giglio, Francesco Cavaliere, Piero Giulio Giulianini, Joachim Kurtz, Maria Luigia Vommaro and Pietro Brandmayr

Diversity, 2019, 11, 241
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Groove binding between ferulic acid and calf thymus DNA: spectroscopic methodology combined with chemometrics and molecular docking studies

Guowen Zhang, Zhisheng Zhou, Jianjian Xu, Yijing Liao and Xing Hu

Journal of Biomolecular Structure and Dynamics, 2020, 38, 2029
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Decrypting the interaction pattern of Piperlongumine with calf thymus DNA and dodecamer d(CGCGAATTCGCG)2 B-DNA: Biophysical and molecular docking analysis

Vaishali Yadav, Anuja Krishnan, Mirza Sarwar Baig, Muhammed Majeed, Mahadeva Nayak and Divya Vohora

Biophysical Chemistry, 2022, 285, 106808
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Assessment of cytotoxicity in gills of fish Labeo rohita reared in untreated and treated sewage water

Reetu Bhanot and Swarndeep Singh Hundal

Environ Sci Pollut Res, 2021, 28, 59306
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Dinitroaniline herbicides: a comprehensive review of toxicity and side effects on animal non-target organisms

Anita Giglio and Maria Luigia Vommaro

Environ Sci Pollut Res, 2022, 29, 76687
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Effect of metal ions present in milk on the structure and functional integrity of native and polyaniline chitosan nanocomposites bound β-galactosidase: A multi-spectroscopic approach

Maryam Khan and Qayyum Husain

Food Chemistry, 2019, 279, 312
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DNA damage in haemocytes of Harpalus (Pseudophonus) rufipes (De Geer, 1774) (Coleoptera, Carabidae) as an indicator of sublethal effects of exposure to herbicides

Francesco Cavaliere, Pietro Brandmayr and Anita Giglio

Ecological Indicators, 2019, 98, 88
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Interaction between antidepressant drug trazodone with double-stranded DNA: Multi-spectroscopic and computational analysis

Ambrish Kumar, Moumita Saha, Juhi Saraswat, Kamalakanta Behera and Shruti Trivedi

International Journal of Biological Macromolecules, 2024, 277, 134113
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Spectroscopic and computational approaches to unravel the mode of binding between a isoflavone, biochanin-A and calf thymus DNA

Suma Pawar, Ranjita Tandel, Ramesh Kunabevu and Seetharamappa Jaldappagari

Journal of Biomolecular Structure and Dynamics, 2019, 37, 846
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Spectroscopic, electrochemical and molecular docking study of the binding interaction of a small molecule 5H-naptho[2,1-f][1,2] oxathieaphine 2,2-dioxide with calf thymus DNA

Abhijit Mukherjee, Shovan Mondal and Bula Singh

International Journal of Biological Macromolecules, 2017, 101, 527
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Two new oral candidates as anticancer platinum complexes of 1,3-dimethyl pentyl glycine ligand as doping agents against breast cancer

Nadali Ramezani, Mahboube Eslami Moghadam, Mahdi Behzad and Samaneh Zolghadri

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2021, 251, 119415
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Multiple biomarker responses (serum biochemistry, oxidative stress, genotoxicity and histopathology) in Channa punctatus exposed to heavy metal loaded waste water

Mehjbeen Javed, Md. Irshad Ahmad, Nazura Usmani and Masood Ahmad

Sci Rep, 2017, 7
DOI: 10.1038/s41598-017-01749-6

The new psychoactive substances 25H-NBOMe and 25H-NBOH induce abnormal development in the zebrafish embryo and interact in the DNA major groove

Wellington Alves de Barros, Camila da Silva Nunes, Juliana Alves da Costa Ribeiro Souza, Igor José dos Santos Nascimento, Isis Martins Figueiredo, Thiago Mendonça de Aquino, Leonardo Vieira, Davi Farias, Josué Carinhanha Caldas Santos and Ângelo de Fátima

Current Research in Toxicology, 2021, 2, 386
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Exploring the binding characteristics of febuxostat, an inhibitor of xanthine oxidase with calf thymus DNA: Multi-spectroscopic methodologies and molecular docking

Xin-Yan Lu, Yan-Yue Lou, Kai-Li Zhou, Shao-Liang Jiang and Jie-Hua Shi

Nucleosides, Nucleotides & Nucleic Acids, 2022, 41, 605
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One‐pot synthesis and characterization CdTe:Zn2+ quantum dots and its molecular interaction with calf thymus DNA

Cheng‐Zhang Yang, Lin‐Yi Li, Xiao‐Han Wang, Si‐Qian Yu and Yan‐Jun Hu

J of Molecular Recognition, 2018, 31
DOI: 10.1002/jmr.2691

In vitro binding interaction of atorvastatin with calf thymus DNA: multispectroscopic, gel electrophoresis and molecular docking studies

Zeinab Mirzaei-Kalar

Journal of Pharmaceutical and Biomedical Analysis, 2018, 161, 101
DOI: 10.1016/j.jpba.2018.08.033

Assessment of the mutagenicity of the technical product of N-(1-ethylpropyl)-2,6-dinitro -3,4-xylidinen

O. V. Egorova, Nataliya A. Ilyushina, N. S. Averianova, G. V. Masaltsev and O. O. Dmitricheva

Hygiene and sanitation, 2020, 99, 418
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Multi-Spectroscopic and Molecular Simulation Approaches to Characterize the Intercalation Binding of 1-Naphthaleneacetic Acid With Calf Thymus DNA

Xing Hu, Xiaoqiao Luo, Zhisheng Zhou, Rui Wang, Yaqin Hu, Guimei Zhang and Guowen Zhang

Front. Toxicol., 2021, 3
DOI: 10.3389/ftox.2021.620501

New insights into the anti-hepatoma mechanism of Alisol G-metal ions complexes based on c-myc DNA

Fei Xu, Jun Chen, Cai Lu, Hanyu Cao, Wei Gu, Wei Gu and Li Zeng

Arabian Journal of Chemistry, 2021, 14, 103425
DOI: 10.1016/j.arabjc.2021.103425

Multi-spectroscopic and free energy landscape analysis on the binding of antiviral drug remdesivir with calf thymus DNA

R. Durga Priyadharshini, S. Ponkarpagam, K.N. Vennila and Kuppanagounder P. Elango

Spectrochimica Acta Part A: Molecular and Biomolecular Spectroscopy, 2022, 278, 121363
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Pendimethalin-induced oxidative stress, DNA damage and activation of anti-inflammatory and apoptotic markers in male rats

Md. Irshad Ahmad, Mohd Faraz Zafeer, Mehjbeen Javed and Masood Ahmad

Sci Rep, 2018, 8
DOI: 10.1038/s41598-018-35484-3