Perspectives on conformationally constrained peptide nucleic acid (PNA): insights into the structural design, properties and applications

Chaturong Suparpprom and Tirayut Vilaivan

RSC Chem. Biol., 2022, 3, 648
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γ-PNA PREORGANIZATION: SYNTHESIS OF MODEL DIMER AND ITS STRUCTURE STUDY BY 2D NMR SPECTROSCOPY

A. V. Dezhenkov, D. A. Cheshkov, I. A. Prokhorov, A. I. Lutik and Yu. G. Kirillova

Fine Chem. Tech., 2017, 12, 62
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Development of the Right- and Left-Handed Gamma Peptide Nucleic Acid Building Blocks for On-Resin Chemical Functionalization

Isha Dhami, Shivaji A. Thadke and Danith H. Ly

J. Org. Chem., 2022, 87, 13873
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Programmable Nanoscaffolds That Control Ligand Display to a G-Protein-Coupled Receptor in Membranes To Allow Dissection of Multivalent Effects

Andrew V. Dix, Steven M. Moss, Khai Phan, Travis Hoppe, Silvia Paoletta, Eszter Kozma, Zhan-Guo Gao, Stewart R. Durell, Kenneth A. Jacobson and Daniel H. Appella

J. Am. Chem. Soc., 2014, 136, 12296
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Chemical approaches to discover the full potential of peptide nucleic acids in biomedical applications

Nikita Brodyagin, Martins Katkevics, Venubabu Kotikam, Christopher A Ryan and Eriks Rozners

Beilstein J. Org. Chem., 2021, 17, 1641
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Focus on PNA Flexibility and RNA Binding using Molecular Dynamics and Metadynamics

Massimiliano Donato Verona, Vincenzo Verdolino, Ferruccio Palazzesi and Roberto Corradini

Sci Rep, 2017, 7
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Development of Cu2+-Based Distance Methods and Force Field Parameters for the Determination of PNA Conformations and Dynamics by EPR and MD Simulations

Austin Gamble Jarvi, Artur Sargun, Xiaowei Bogetti, Junmei Wang, Catalina Achim and Sunil Saxena

J. Phys. Chem. B, 2020, 124, 7544
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Improved Force Fields for Peptide Nucleic Acids with Optimized Backbone Torsion Parameters

Maciej Jasiński, Michael Feig and Joanna Trylska

J. Chem. Theory Comput., 2018, 14, 3603
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Structural Insights on Tiny Peptide Nucleic Acid (PNA) Analogues of miRNA-34a: An in silico and Experimental Integrated Approach

Maria Moccia, Flavia Anna Mercurio, Emma Langella, Valerio Piacenti, Marilisa Leone, Mauro F. A. Adamo and Michele Saviano

Front. Chem., 2020, 8
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Parameterization of the miniPEG-Modified γPNA Backbone: Toward Induced γPNA Duplex Dissociation

Angel Tamez, Lennart Nilsson, Mihaela-Rita Mihailescu and Jeffrey D. Evanseck

J. Chem. Theory Comput., 2023, 19, 3346
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Crystal Structure of Chiral γPNA with Complementary DNA Strand: Insights into the Stability and Specificity of Recognition and Conformational Preorganization

Joanne I. Yeh, Boris Shivachev, Srinivas Rapireddy, Matthew J. Crawford, Roberto R. Gil, Shoucheng Du, Marcela Madrid and Danith H. Ly

J. Am. Chem. Soc., 2010, 132, 10717
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Effects of the Backbone and Chemical Linker on the Molecular Conductance of Nucleic Acid Duplexes

Edward Beall, Selma Ulku, Chaoren Liu, Emil Wierzbinski, Yuqi Zhang, Yookyung Bae, Peng Zhang, Catalina Achim, David N. Beratan and David H. Waldeck

J. Am. Chem. Soc., 2017, 139, 6726
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Shape selective bifacial recognition of double helical DNA

Shivaji A. Thadke, V. M. Hridya, J. Dinithi R. Perera, Roberto R. Gil, Arnab Mukherjee and Danith H. Ly

Commun Chem, 2018, 1
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Tryptophan-PNA gc Conjugates Self-Assemble to Form Fibers

Andrea Mosseri, María Sancho-Albero, Flavia Anna Mercurio, Marilisa Leone, Luisa De Cola and Alessandra Romanelli

Bioconjugate Chem., 2023, 34, 1429
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RTD-1Mimic Containing γPNA Scaffold Exhibits Broad-Spectrum Antibacterial Activities

Srinivas Rapireddy, Linda Nhon, Robert E. Meehan, Jonathan Franks, Donna Beer Stolz, Dat Tran, Michael E. Selsted and Danith H. Ly

J. Am. Chem. Soc., 2012, 134, 4041
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Antibacterial Peptide Nucleic Acids—Facts and Perspectives

Monika Wojciechowska, Marcin Równicki, Adam Mieczkowski, Joanna Miszkiewicz and Joanna Trylska

Molecules, 2020, 25, 559
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Effect of Backbone Flexibility on Charge Transfer Rates in Peptide Nucleic Acid Duplexes

Emil Wierzbinski, Arnie de Leon, Xing Yin, Alexander Balaeff, Kathryn L. Davis, Srinivas Reppireddy, Ravindra Venkatramani, Shahar Keinan, Danith H. Ly, Marcela Madrid, David N. Beratan, Catalina Achim and David H. Waldeck

J. Am. Chem. Soc., 2012, 134, 9335
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Duplex formation and secondary structure of γ-PNA observed by NMR and CD

J.M.P. Viéville, S. Barluenga, N. Winssinger and M.A. Delsuc

Biophysical Chemistry, 2016, 210, 9
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Triazine-Based Janus G–C Nucleobase as a Building Block for Self-Assembly, Peptide Nucleic Acids, and Smart Polymers

Chhuttan L. Meena, Dharmendra Singh, Bhavya Kizhakeetil, Manasa Prasad, Malini George, Srinu Tothadi and Gangadhar J. Sanjayan

J. Org. Chem., 2021, 86, 3186
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