Using hyperspectral imaging automatic classification of gastric cancer grading with a shallow residual network

Song Liu, Quan Wang, Geng Zhang, Jian Du, Bingliang Hu and Zhoufeng Zhang

Anal. Methods, 2020, 12, 3844
DOI: 10.1039/D0AY01023E

Clinical Spectroscopy: Lost in Translation?

James M. Cameron, Christopher Rinaldi, Samantha H. Rutherford, Alexandra Sala, Ashton G. Theakstone and Matthew J. Baker

Appl Spectrosc, 2022, 76, 393
DOI: 10.1177/00037028211021846

Innovation in Non-Invasive Diagnosis and Disease Monitoring for Meningiomas

Brianna Korte and Dimitrios Mathios

IJMS, 2024, 25, 4195
DOI: 10.3390/ijms25084195

Exploring pre-analytical factors for the optimisation of serum diagnostics: Progressing the clinical utility of ATR-FTIR spectroscopy

James M. Cameron, Holly J. Butler, David J. Anderson, Loren Christie, Lily Confield, Katie E. Spalding, Duncan Finlayson, Stuart Murray, Zanib Panni, Christopher Rinaldi, Alexandra Sala, Ashton G. Theakstone and Matthew J. Baker

Vibrational Spectroscopy, 2020, 109, 103092
DOI: 10.1016/j.vibspec.2020.103092

The use of ATR-FTIR spectroscopy for the diagnosis of Alzheimer’s disease using oral buccal cells

Maria Paraskevaidi, Salman Karim, Marfran Santos, Kassio Lima and StJohn Crean

Applied Spectroscopy Reviews, 2024, 59, 1021
DOI: 10.1080/05704928.2023.2284283

Providing potential solutions by using FT-IR spectroscopy for biofluid analysis: Clinical impact of optical screening and diagnostic tests

Luis Felipe das Chagas e Silva de Carvalho, Thayná Melo de Lima Morais and Marcelo Saito Nogueira

Photodiagnosis and Photodynamic Therapy, 2023, 44, 103753
DOI: 10.1016/j.pdpdt.2023.103753

Stratifying Brain Tumour Histological Sub-Types: The Application of ATR-FTIR Serum Spectroscopy in Secondary Care

James M. Cameron, Christopher Rinaldi, Holly J. Butler, Mark G Hegarty, Paul M. Brennan, Michael D. Jenkinson, Khaja Syed, Katherine M. Ashton, Timothy P. Dawson, David S. Palmer and Matthew J. Baker

Cancers, 2020, 12, 1710
DOI: 10.3390/cancers12071710

Detection of Glycine as a Model Protein in Blood Serum Using 2D-IR Spectroscopy

Samantha H. Rutherford, Gregory M. Greetham, Paul M. Donaldson, Michael Towrie, Anthony W. Parker, Matthew J. Baker and Neil T. Hunt

Anal. Chem., 2021, 93, 920
DOI: 10.1021/acs.analchem.0c03567

Micro-tomographic and infrared spectral data mining for breast cancer diagnosis

Shanshan Guo, Junshan Xiu, Lingnan Kong, Xin Kong, Hanqiu Wang, Zhiwei Lü, Famei Xu, Jing Li, Te Ji, Fuli Wang and Huiqiang Liu

Optics and Lasers in Engineering, 2023, 160, 107305
DOI: 10.1016/j.optlaseng.2022.107305

Fourier‐transform infrared spectroscopy of biofluids: A practical approach

Ashton G. Theakstone, Christopher Rinaldi, Holly J. Butler, James M. Cameron, Lily Rose Confield, Samantha H. Rutherford, Alexandra Sala, Sayali Sangamnerkar and Matthew J. Baker

Transl Biophotonics, 2021, 3
DOI: 10.1002/tbio.202000025

Detection of Human Cholangiocarcinoma Markers in Serum Using Infrared Spectroscopy

Patutong Chatchawal, Molin Wongwattanakul, Patcharaporn Tippayawat, Kamilla Kochan, Nichada Jearanaikoon, Bayden R. Wood and Patcharee Jearanaikoon

Cancers, 2021, 13, 5109
DOI: 10.3390/cancers13205109

Rapid Spectroscopic Liquid Biopsy for the Universal Detection of Brain Tumours

Ashton G. Theakstone, Paul M. Brennan, Michael D. Jenkinson, Samantha J. Mills, Khaja Syed, Christopher Rinaldi, Yun Xu, Royston Goodacre, Holly J. Butler, David S. Palmer, Benjamin R. Smith and Matthew J. Baker

Cancers, 2021, 13, 3851
DOI: 10.3390/cancers13153851

A multi-centre performance evaluation of a commercially developed liquid biopsy for the earlier detection of brain tumours

P.M. Brennan, J.M. Cameron, D. Eustace, H.J. Butler, A. Sala, A. Lazarus, G. Antoniou, D.S. Palmer, E. Gray, C. Kerrie, S. McDonald, P. Black, S. Sheraz, I. Adekoya, A. Jakola, A. Denes, M.D. Jenkinson, J. Jones, S. Pendered, S. Koljenovic, K. Zwaenepoel, A. Sieben, M. Ahmed, B. Feyen, R.K. Mathew, C. Coils, A. Ismail, I. Phang, A. Brown, S. Patel, T. Weiss, P.W. Westarp, A. Kopp and M.J. Baker

ESMO Open, 2026, 11, 105938
DOI: 10.1016/j.esmoop.2025.105938

Discovering Glioma Tissue through Its Biomarkers’ Detection in Blood by Raman Spectroscopy and Machine Learning

Denis Vrazhnov, Anna Mankova, Evgeny Stupak, Yury Kistenev, Alexander Shkurinov and Olga Cherkasova

Pharmaceutics, 2023, 15, 203
DOI: 10.3390/pharmaceutics15010203

Early economic evaluation to guide the development of a spectroscopic liquid biopsy for the detection of brain cancer

Ewan Gray, James M. Cameron, Holly J. Butler, Michael D. Jenkinson, Mark G. Hegarty, David S. Palmer, Paul M. Brennan and Matthew J. Baker

Int J Technol Assess Health Care, 2021, 37
DOI: 10.1017/S0266462321000143

Clinical validation of a spectroscopic liquid biopsy for earlier detection of brain cancer

James M Cameron, Paul M Brennan, Georgios Antoniou, Holly J Butler, Loren Christie, Justin J A Conn, Tom Curran, Ewan Gray, Mark G Hegarty, Michael D Jenkinson, Daniel Orringer, David S Palmer, Alexandra Sala, Benjamin R Smith and Matthew J Baker

Neuro-Oncology Advances, 2022, 4
DOI: 10.1093/noajnl/vdac024

Liquid Biopsy for Pancreatic Cancer Detection Using Infrared Spectroscopy

Alexandra Sala, James M. Cameron, Cerys A. Jenkins, Hugh Barr, Loren Christie, Justin J. A. Conn, Thomas R. Jeffry Evans, Dean A. Harris, David S. Palmer, Christopher Rinaldi, Ashton G. Theakstone and Matthew J. Baker

Cancers, 2022, 14, 3048
DOI: 10.3390/cancers14133048

Terahertz Time-Domain Spectroscopy of Blood Serum for Differentiation of Glioblastoma and Traumatic Brain Injury

Denis A. Vrazhnov, Daria A. Ovchinnikova, Tatiana V. Kabanova, Andrey G. Paulish, Yury V. Kistenev, Nazar A. Nikolaev and Olga P. Cherkasova

Applied Sciences, 2024, 14, 2872
DOI: 10.3390/app14072872

Micro-Fourier-transform infrared reflectance spectroscopy as tool for probing IgG glycosylation in COVID-19 patients

Carla Carolina Silva Bandeira, Karen Cristina Rolim Madureira, Meire Bocoli Rossi, Juliana Failde Gallo, Ana Paula Marques Aguirra da Silva, Vilanilse Lopes Torres, Vinicius Alves de Lima, Norival Kesper Júnior, Janete Dias Almeida, Rodrigo Melim Zerbinati, Paulo Henrique Braz-Silva, José Angelo Lauletta Lindoso and Herculano da Silva Martinho

Sci Rep, 2022, 12
DOI: 10.1038/s41598-022-08156-6

Distinguishing IDH mutation status in gliomas using FTIR-ATR spectra of peripheral blood plasma indicating clear traces of protein amyloid aggregation

Saiko Kino, Masayuki Kanamori, Yoshiteru Shimoda, Kuniyasu Niizuma, Hidenori Endo and Yuji Matsuura

BMC Cancer, 2024, 24
DOI: 10.1186/s12885-024-11970-y

The application of feature engineering in establishing a rapid and robust model for identifying patients with glioma

Mingrui Ma, Xuecong Tian, Fangfang Chen, Xiaojian Ma, Wenjia Guo and Xiaoyi Lv

Lasers Med Sci, 2022, 37, 1007
DOI: 10.1007/s10103-021-03346-6

Biofluid diagnostics by FTIR spectroscopy: A platform technology for cancer detection

Alexandra Sala, David J. Anderson, Paul M. Brennan, Holly J. Butler, James M. Cameron, Michael D. Jenkinson, Christopher Rinaldi, Ashton G. Theakstone and Matthew J. Baker

Cancer Letters, 2020, 477, 122
DOI: 10.1016/j.canlet.2020.02.020

Clinical applications of infrared and Raman spectroscopy in the fields of cancer and infectious diseases

Maria Paraskevaidi, Baker J. Matthew, Butler J. Holly, Byrne J. Hugh, Chakkumpulakkal P. V. Thulya, Christie Loren, Crean StJohn, Gardner Peter, Gassner Callum, Kazarian G. Sergei, Kochan Kamila, Kyrgiou Maria, Lima M. G. Kássio, Martin-Hirsch L. Pierre, Paraskevaidis Evangelos, Pebotuwa Savithri, Adegoke A. John, Sala Alexandra, Santos Marfran, Sulé-Suso Josep, Tyagi Gunjan, Walsh Michael and Wood Bayden

Applied Spectroscopy Reviews, 2021, 56, 804
DOI: 10.1080/05704928.2021.1946076

The future of brain tumor liquid biopsies in the clinic

Paul M Brennan

Neuro-Oncology Advances, 2022, 4, ii4
DOI: 10.1093/noajnl/vdac091

An infrared spectral biomarker accurately predicts neurodegenerative disease class in the absence of overt symptoms

Lila Lovergne, Dhruba Ghosh, Renaud Schuck, Aris A. Polyzos, Andrew D. Chen, Michael C. Martin, Edward S. Barnard, James B. Brown and Cynthia T. McMurray

Sci Rep, 2021, 11
DOI: 10.1038/s41598-021-93686-8

Biofluid analysis and classification using IR and 2D-IR spectroscopy

Samantha H. Rutherford, Alison Nordon, Neil T. Hunt and Matthew J. Baker

Chemometrics and Intelligent Laboratory Systems, 2021, 217, 104408
DOI: 10.1016/j.chemolab.2021.104408

Fast and Deep Diagnosis Using Blood-Based ATR-FTIR Spectroscopy for Digestive Tract Cancers

Shanshan Guo, Gongxiang Wei, Wenqiang Chen, Chengbin Lei, Cong Xu, Yu Guan, Te Ji, Fuli Wang and Huiqiang Liu

Biomolecules, 2022, 12, 1815
DOI: 10.3390/biom12121815

Vibrational Biospectroscopy: An Alternative Approach to Endometrial Cancer Diagnosis and Screening

Roberta Schiemer, David Furniss, Sendy Phang, Angela B. Seddon, William Atiomo and Ketankumar B. Gajjar

IJMS, 2022, 23, 4859
DOI: 10.3390/ijms23094859

Investigating centrifugal filtration of serum-based FTIR spectroscopy for the stratification of brain tumours

Ashton G. Theakstone, Paul M. Brennan, Michael D. Jenkinson, Royston Goodacre, Matthew J. Baker and Tommaso Lomonaco

PLoS ONE, 2023, 18, e0279669
DOI: 10.1371/journal.pone.0279669

Serum metabolomics identifies unique inflammatory signatures to distinguish rheumatoid arthritis responders and non-responders to TNF inhibitor therapy

Michele Fresneda Alarcon, Yun Xu, Cassio Lima, Susanna Ford, Rudi Grosman, Royston Goodacre, Marie M Phelan and Helen L Wright

Metabolomics, 2025, 21
DOI: 10.1007/s11306-025-02310-7

Metabolomics Profiling of Pituitary Adenomas by Raman Spectroscopy, Attenuated Total Reflection-Fourier Transform Infrared Spectroscopy, and Mass Spectrometry of Serum Samples

Arghya Banerjee, Ankit Halder, Priyanka Jadhav, Renuka Bankar, Janhavi Pattarkine, Arti Hole, Abhidha Shah, Atul Goel, C. Murali Krishna and Sanjeeva Srivastava

Anal. Chem., 2022, 94, 11898
DOI: 10.1021/acs.analchem.2c02487

Infrared Spectroscopy: A New Frontier in Hematological Disease Diagnosis

Charlotte Delrue, Reinhart Speeckaert, Matthijs Oyaert, Tessa Kerre, Sylvie Rottey, Renaat Coopman, Wouter Huvenne, Sander De Bruyne and Marijn M. Speeckaert

IJMS, 2023, 24, 17007
DOI: 10.3390/ijms242317007

Revising Fourier-transform infrared (FT-IR) and Raman spectroscopy towards brain cancer detection

Taha Lilo, Camilo L.M. Morais, Catriona Shenton, Arup Ray and Nihal Gurusinghe

Photodiagnosis and Photodynamic Therapy, 2022, 38, 102785
DOI: 10.1016/j.pdpdt.2022.102785

Applications of Artificial Intelligence Based on Medical Imaging in Glioma: Current State and Future Challenges

Jiaona Xu, Yuting Meng, Kefan Qiu, Win Topatana, Shijie Li, Chao Wei, Tianwen Chen, Mingyu Chen, Zhongxiang Ding and Guozhong Niu

Front. Oncol., 2022, 12
DOI: 10.3389/fonc.2022.892056

Correlations between autoantibodies and the ATR-FTIR spectra of sera from rheumatoid arthritis patients

Katarzyna Durlik-Popińska, Paulina Żarnowiec, Iwona Konieczna-Kwinkowska, Łukasz Lechowicz, Józef Gawęda and Wiesław Kaca

Sci Rep, 2021, 11
DOI: 10.1038/s41598-021-96848-w

The Promise of Infrared Spectroscopy in Liquid Biopsies for Solid Cancer Detection

Charlotte Delrue, Sander De Bruyne and Marijn M. Speeckaert

Diagnostics, 2025, 15, 368
DOI: 10.3390/diagnostics15030368

Interrogation of IDH1 Status in Gliomas by Fourier Transform Infrared Spectroscopy

James M. Cameron, Justin J. A. Conn, Christopher Rinaldi, Alexandra Sala, Paul M. Brennan, Michael D. Jenkinson, Helen Caldwell, Gianfelice Cinque, Khaja Syed, Holly J. Butler, Mark G. Hegarty, David S. Palmer and Matthew J. Baker

Cancers, 2020, 12, 3682
DOI: 10.3390/cancers12123682