Substituted meso-vinyl-BODIPY as thiol-selective fluorogenic probes for sensing unfolded proteins in the endoplasmic reticulum

Huiying Mu, Koji Miki, Takuya Kubo, Koji Otsuka and Kouichi Ohe

Chem. Commun., 2021, 57, 1818
DOI: 10.1039/D0CC08160D

A multicomponent reaction platform towards multimodal near-infrared BODIPY dyes for STED and fluorescence lifetime imaging

Antonio Fernandez, Nicola Kielland, Ashraff Makda, Neil O. Carragher, M. Carmen González-García, Laura Espinar-Barranco, Juan A. González-Vera, Angel Orte, Rodolfo Lavilla and Marc Vendrell

RSC Chem. Biol., 2022, 3, 1251
DOI: 10.1039/D2CB00168C

Microscope laser assisted photooxidative activation of bioorthogonal ClickOx probes

Attila Kormos, Dóra Kern, Alexandra Egyed, Bianka Söveges, Krisztina Németh and Péter Kele

Chem. Commun., 2020, 56, 5425
DOI: 10.1039/D0CC01512A

Labelling of DNA and RNA in the cellular environment by means of bioorthogonal cycloaddition chemistry

Dorothée Ganz, Dennis Harijan and Hans-Achim Wagenknecht

RSC Chem. Biol., 2020, 1, 86
DOI: 10.1039/D0CB00047G

Near-infrared fluorescent probes: a next-generation tool for protein-labeling applications

Shahi Imam Reja, Masafumi Minoshima, Yuichiro Hori and Kazuya Kikuchi

Chem. Sci., 2021, 12, 3437
DOI: 10.1039/D0SC04792A

Ultrabright two-photon excitable red-emissive fluorogenic probes for fast and wash-free bioorthogonal labelling in live cells

Marie Auvray, Delphine Naud-Martin, Gaëlle Fontaine, Frédéric Bolze, Gilles Clavier and Florence Mahuteau-Betzer

Chem. Sci., 2023, 14, 8119
DOI: 10.1039/D3SC01754K

Novel mono substituted pyridoimidazoisoquinoliniums via a silver-catalyzed intramolecular cyclization and their applications in cellular imaging

Masato Kawakubo, Yoshikazu Inoh, Yuki Murata, Mio Matsumura, Tadahide Furuno and Shuji Yasuike

RSC Adv., 2024, 14, 9758
DOI: 10.1039/D4RA01210K

Xanthene, cyanine, oxazine and BODIPY: the four pillars of the fluorophore empire for super-resolution bioimaging

Soham Samanta, Kaitao Lai, Feihu Wu, Yingchao Liu, Songtao Cai, Xusan Yang, Junle Qu and Zhigang Yang

Chem. Soc. Rev., 2023, 52, 7197
DOI: 10.1039/D2CS00905F

Fluorescence activation, patterning and enhancement with photogenerated radicals, a prefluorescent probe and silver nanostructures

Karol P. Golian, Aviya S. Akari, Gregory K. Hodgson and Stefania Impellizzeri

RSC Adv., 2021, 11, 5163
DOI: 10.1039/D0RA09565F

Advancing super-resolution microscopy with metal complexes: functional imaging agents for nanoscale visualization

Nur Aininie Yusoh, Martin R. Gill and Xiaohe Tian

Chem. Soc. Rev., 2025, 54, 3616
DOI: 10.1039/D4CS01193G

Optical writing and single molecule reading of photoactivatable and silver nanoparticle-enhanced fluorescence

Nicholas P. Dogantzis, Gregory K. Hodgson and Stefania Impellizzeri

Nanoscale Adv., 2020, 2, 1956
DOI: 10.1039/D0NA00049C

Azetidinyl Malachite Green: a superior fluorogen-activating protein probe for live-cell and dynamic SIM imaging

Fei Deng, Xiangning Fang, Qinglong Qiao, Guoli Han, Lu Miao, Shuangshuang Long and Zhaochao Xu

Chem. Sci., 2025, 16, 10010
DOI: 10.1039/D5SC01150G

Evaluation of bioorthogonally applicable tetrazine–Cy3 probes for fluorogenic labeling schemes

Evelin Albitz, Krisztina Németh, Gergely Knorr and Péter Kele

Org. Biomol. Chem., 2023, 21, 7358
DOI: 10.1039/D3OB01204B

Experimental and molecular dynamics studies on aggregation behaviour of salicylaldehyde azine ester

Sneha Kagatikar, Anoop Kishore Vatti and Dhanya Sunil

Soft Matter, 2022, 18, 4273
DOI: 10.1039/D2SM00078D

Mechanistic insights into the design of fluorogenic molecules for wash-free biological applications

Rongrong Huang, Syed Ali Abbas Abedi, Guanyu Jiang, Chao Wang, Lingya Peng, Tianruo Shen, Nabil Mroweh, Yu Fang and Xiaogang Liu

Chem. Soc. Rev., 2026, 55, 3957
DOI: 10.1039/D5CS01519G

Biomedical applications of copper-free click chemistry: in vitro, in vivo, and ex vivo

Eunha Kim and Heebeom Koo

Chem. Sci., 2019, 10, 7835
DOI: 10.1039/C9SC03368H

Leaflet-specific phospholipid imaging using genetically encoded proximity sensors

William M. Moore, Roberto J. Brea, Caroline H. Knittel, Ellen Wrightsman, Brandon Hui, Jinchao Lou, Christelle F. Ancajas, Michael D. Best, Christopher J. Obara, Neal K. Devaraj and Itay Budin

Nat Chem Biol, 2026, 22, 128
DOI: 10.1038/s41589-025-02021-z

Dyes in modern organic chemistry

Heiko Ihmels

Beilstein J. Org. Chem., 2019, 15, 2798
DOI: 10.3762/bjoc.15.272

A Bioorthogonally Applicable, Fluorogenic, Large Stokes-Shift Probe for Intracellular Super-Resolution Imaging of Proteins

Evelin Németh, Gergely Knorr, Krisztina Németh and Péter Kele

Biomolecules, 2020, 10, 397
DOI: 10.3390/biom10030397

A Systematic Study of Coumarin–Tetrazine Light‐Up Probes for Bioorthogonal Fluorescence Imaging

Juraj Galeta, Rastislav Dzijak, Jan Obořil, Martin Dračínský and Milan Vrabel

Chemistry A European J, 2020, 26, 9945
DOI: 10.1002/chem.202001290

Single-Colour, Visible Light Activation and Excitation of the Luminescence of a ‘Switch-On’ Dye and Enhancement by Silver Nanoparticles

Lavinia A. Trifoi, Nicholas P. Dogantzis, Gregory K. Hodgson, Sumaiya A. Soha, Costin N. Antonescu, Roberto J. Botelho, R. Stephen Wylie and Stefania Impellizzeri

SSRN Journal, 2022
DOI: 10.2139/ssrn.4174124

Between life and death: strategies to reduce phototoxicity in super-resolution microscopy

Kalina L Tosheva, Yue Yuan, Pedro Matos Pereira, Siân Culley and Ricardo Henriques

J. Phys. D: Appl. Phys., 2020, 53, 163001
DOI: 10.1088/1361-6463/ab6b95

Bioorthogonally activatable cyanine dye with torsion-induced disaggregation for in vivo tumor imaging

Xianghan Zhang, Jingkai Gao, Yingdi Tang, Jie Yu, Si Si Liew, Chaoqiang Qiao, Yutian Cao, Guohuan Liu, Hongyu Fan, Yuqiong Xia, Jie Tian, Kanyi Pu and Zhongliang Wang

Nat Commun, 2022, 13
DOI: 10.1038/s41467-022-31136-3

Co‐aggregation as A Simple Strategy for Preparing Fluorogenic Tetrazine Probes with On‐Demand Fluorogen Selection**

Shinsuke Segawa, Jiajie Wu, Ryan T. K. Kwok, Terence T. W. Wong, Xuewen He and Ben Zhong Tang

Angewandte Chemie, 2024, 136
DOI: 10.1002/ange.202313930

Smart Photochromic Materials Triggered with Visible Light

Anna‐Lena Leistner and Zbigniew L. Pianowski

Eur J Org Chem, 2022, 2022
DOI: 10.1002/ejoc.202101271

Diversity-Oriented Synthesis of Highly Fluorescent Fused Isoquinolines for Specific Subcellular Localization

Yoarhy A. Amador-Sánchez, Andrés Aguilar-Granda, Ricardo Flores-Cruz, Davir González-Calderón, Cynthia Orta, Braulio Rodríguez-Molina, Arturo Jiménez-Sánchez and Luis D. Miranda

J. Org. Chem., 2020, 85, 633
DOI: 10.1021/acs.joc.9b02712

Catching Common Cold Virus with a Net: Pyridostatin Forms Filaments in Tris Buffer That Trap Viruses—A Novel Antiviral Strategy?

Antonio Real-Hohn, Rong Zhu, Haleh Ganjian, Nahla Ibrahim, Peter Hinterdorfer, Heinrich Kowalski and Dieter Blaas

Viruses, 2020, 12, 723
DOI: 10.3390/v12070723

Fluorescent Probes for Super-Resolution Microscopy of Lysosomes

Aditya Yadav, Chethana Rao and Chayan K. Nandi

ACS Omega, 2020, 5, 26967
DOI: 10.1021/acsomega.0c04018

Talbot-effect structured illumination: pattern generation and application to long-distance $$\upmu $$-MTV

Charles Fort, Matthieu A. André, Hatef Pazhand and Philippe M. Bardet

Exp Fluids, 2020, 61
DOI: 10.1007/s00348-019-2870-7

Fluorogen activating protein toolset for protein trafficking measurements

Lydia A. Perkins and Marcel P. Bruchez

Traffic, 2020, 21, 333
DOI: 10.1111/tra.12722

3D Super-Resolution Fluorescence Imaging of Microgels

Oleksii Nevskyi and Dominik Wöll

Annu. Rev. Phys. Chem., 2023, 74, 391
DOI: 10.1146/annurev-physchem-062422-022601

Stereochemistry‐Dependent Labeling of Organelles with a Near‐Infrared‐Emissive Phosphorus‐Bridged Rhodamine Dye in Live‐Cell Imaging

Qian Wu, Masayasu Taki, Yoshiki Tanaka, Manish Kesherwani, Quan Manh Phung, Sawako Enoki, Yasushi Okada, Florence Tama and Shigehiro Yamaguchi

Angewandte Chemie, 2024, 136
DOI: 10.1002/ange.202400711

Minimal genetically encoded tags for fluorescent protein labeling in living neurons

Aleksandra Arsić, Cathleen Hagemann, Nevena Stajković, Timm Schubert and Ivana Nikić-Spiegel

Nat Commun, 2022, 13
DOI: 10.1038/s41467-022-27956-y

An insight into the potentials of carbon dots for in vitro live-cell imaging: recent progress, challenges, and prospects

Zahra Hallaji, Zeinab Bagheri, Mahdi Oroujlo, Mehrnoosh Nemati, Zeinab Tavassoli and Bijan Ranjbar

Microchim Acta, 2022, 189
DOI: 10.1007/s00604-022-05259-9

Co‐aggregation as A Simple Strategy for Preparing Fluorogenic Tetrazine Probes with On‐Demand Fluorogen Selection**

Shinsuke Segawa, Jiajie Wu, Ryan T. K. Kwok, Terence T. W. Wong, Xuewen He and Ben Zhong Tang

Angew Chem Int Ed, 2024, 63
DOI: 10.1002/anie.202313930

Mono o‐nitrobenzyl dihydrofluorescein as a photoactivatable ROS sensor for oxidative stress in live cells

Hye‐Ryeong Jo, Seo Jin Kim, Yingyu Zheng, Seok‐Hyun Cho, Sang un Nam, Seungwon Moon, Chulhun Kang and Tae Woo Kim

Bulletin Korean Chem Soc, 2023, 44, 1015
DOI: 10.1002/bkcs.12784

Unraveling the Nanoscopic Organization and Function of Central Mammalian Presynapses With Super-Resolution Microscopy

Lia G. Carvalhais, Vera C. Martinho, Elisabete Ferreiro and Paulo S. Pinheiro

Front. Neurosci., 2021, 14
DOI: 10.3389/fnins.2020.578409

Challenges facing quantitative large-scale optical super-resolution, and some simple solutions

Tal M. Dankovich and Silvio O. Rizzoli

iScience, 2021, 24, 102134
DOI: 10.1016/j.isci.2021.102134

Bioengineering tools for probing intracellular events in T lymphocytes

Xinyuan Zhang, Chelsea F. Mariano, Yuta Ando and Keyue Shen

WIREs Mechanisms of Disease, 2021, 13
DOI: 10.1002/wsbm.1510

Photo-uncaging Triggers on Self-Blinking to Control Single-Molecule Fluorescence Kinetics for Super-resolution Imaging

Ying Zheng, Zhiwei Ye, Xue Zhang and Yi Xiao

ACS Nano, 2024, 18, 18477
DOI: 10.1021/acsnano.4c03809

Large Stokes-shift bioorthogonal probes for STED, 2P-STED and multi-color STED nanoscopy

György Török, Gergely B Cserép, András Telek, Dóra Arany, Melinda Váradi, László Homolya, Miklós Kellermayer, Péter Kele and Krisztina Németh

Methods Appl. Fluoresc., 2021, 9, 015006
DOI: 10.1088/2050-6120/abb363

Chemical Probe for Imaging of Polo-like Kinase 4 and Centrioles

Aleksandar Salim, Philipp Werther, Georgios N. Hatzopoulos, Luc Reymond, Richard Wombacher, Pierre Gönczy and Kai Johnsson

JACS Au, 2023, 3, 2247
DOI: 10.1021/jacsau.3c00271

Single-molecule FRET on its way to structural biology in live cells

Robert B. Quast and Emmanuel Margeat

Nat Methods, 2021, 18, 344
DOI: 10.1038/s41592-021-01084-9

Emergence of Carbon Nanodots as a Probe for Super-Resolution Microscopy

Navneet C. Verma, Aditya Yadav, Chethana Rao, Pushpendra M. Mishra and Chayan K. Nandi

J. Phys. Chem. C, 2021, 125, 1637
DOI: 10.1021/acs.jpcc.0c09695

Silinanyl Rhodamines and Silinanyl Fluoresceins for Super-Resolution Microscopy

Daiki Hara, Shin-nosuke Uno, Takafumi Motoki, Yuji Kazuta, Yoshihiko Norimine, Masatoshi Suganuma, Shingo Fujiyama, Yuki Shimaoka, Kazuto Yamashita, Masaya Okada, Youichi Nishikawa, Hiroyuki Amino and Shigeki Iwanaga

J. Phys. Chem. B, 2021, 125, 8703
DOI: 10.1021/acs.jpcb.1c03193

New salicylaldehyde azine esters: Structural, aggregation induced fluorescence, electrochemical and theoretical studies

Sneha Kagatikar, Dhanya Sunil, Dhananjaya Kekuda, Suresh D. Kulkarni and Abdul Ajees Abdul Salam

Journal of Molecular Liquids, 2020, 318, 114029
DOI: 10.1016/j.molliq.2020.114029

Lysosomes Targeting pH Activable Imaging‐Guided Photodynamic Agents

Carlotta Figliola, Halina Anton, Christophe Sutter, Camille Chériaux, Alexandra Sutter, Valérie Mazan, Mourad Elhabiri, Pascal Didier, Denis Jacquemin and Gilles Ulrich

ChemBioChem, 2023, 24
DOI: 10.1002/cbic.202300139

Far-red to near-infrared fluorescent probes based on silicon-substituted xanthene dyes for sensing and imaging

Mei Zhao, Yu-Shuang Guo, Wei-Na Xu, Yan-Fang Zhao, Han-Yi Xie, Hui-Juan Li, Xiang-Feng Chen, Ru-Song Zhao and Dian-Shun Guo

TrAC Trends in Analytical Chemistry, 2020, 122, 115704
DOI: 10.1016/j.trac.2019.115704

Photo‐isomerization of the Cyanine Dye Alexa‐Fluor 647 (AF‐647) in the Context of dSTORM Super‐Resolution Microscopy

Joshua K. G. Karlsson, Alex Laude, Michael J. Hall and Anthony Harriman

Chemistry A European J, 2019, 25, 14983
DOI: 10.1002/chem.201904117

Synthetic fluorophores for live-cell fluorescence microscopy and biosensing

Agnese M. Nicoli and Michelle S. Frei

Nat Chem Biol, 2025, 21, 1846
DOI: 10.1038/s41589-025-02038-4

Super‐Resolution Fluorescence Microscopy Methods for Assessing Mouse Biology

Jessica Valli and Jeremy Sanderson

Current Protocols, 2021, 1
DOI: 10.1002/cpz1.224

The cell biologist’s guide to detecting and modulating membrane phospholipids

Michael Worcester, Morgan M.C. Ricci, Claire C. Weckerly, Jesus G. Calixto and Gerald R.V. Hammond

Journal of Cell Biology, 2026, 225
DOI: 10.1083/jcb.202508058

Rhodamine-based caged dye for aqueous MTV with green lasers

Charles Fort and Philippe M. Bardet

Exp Fluids, 2021, 62
DOI: 10.1007/s00348-021-03303-7

Lights on 2,5-diaryl tetrazoles: applications and limits of a versatile photoclick reaction

Valentina Pirota, Alessandra Benassi and Filippo Doria

Photochem Photobiol Sci, 2022, 21, 879
DOI: 10.1007/s43630-022-00173-8

Chemistry for the Identification of Therapeutic Targets: Recent Advances and Future Directions

Nora Khiar‐Fernández, Jon Macicior, Beatriz Marcos‐Ramiro and Silvia Ortega‐Gutiérrez

Eur J Org Chem, 2021, 2021, 1307
DOI: 10.1002/ejoc.202001507

Synthesis, characterization, antibacterial activity, and molecular docking of novel dicyanodihydrofuran‐based push–pull fluorophores

Huda Alsaeedi

Luminescence, 2023, 38, 527
DOI: 10.1002/bio.4477

Tunable fluorogenic DNA probes drive fast and high-resolution single-molecule fluorescence imaging

Mirjam Kümmerlin, Qing Zhao, Jagadish Hazra, Christof Hepp, Alison Farrar, Piers Turner and Achillefs N Kapanidis

Nucleic Acids Research, 2025, 53
DOI: 10.1093/nar/gkaf593

A Fluorogenic Covalent Chromone-Based Intercalator with a Mega-Stokes Shift for Sensing DNA Hybridization

Steve Vincent, Suman Mallick, Guillaume Barnoin, Hoang-Ngoan Le, Alain Burger and Benoît Y. Michel

Chemosensors, 2023, 11, 161
DOI: 10.3390/chemosensors11030161

Optical super-resolution microscopy in polymer science

Dana V. Chapman, Hui Du, Wennie Yun Lee and Ulrich B. Wiesner

Progress in Polymer Science, 2020, 111, 101312
DOI: 10.1016/j.progpolymsci.2020.101312

Synthesis, Photophysical Properties, Antibacterial Activity, DNA Gyrase Inhibition, and Molecular Docking Studies of New Thiophene–Furan Push–Pull Fluorophores

Samar Y. Al nami and Aisha Hossan

Arab J Sci Eng, 2026, 51, 1485
DOI: 10.1007/s13369-025-10102-3

Genetic Code Expansion: Recent Developments and Emerging Applications

Yujia Huang, Pan Zhang, Haoyu Wang, Yan Chen, Tao Liu and Xiaozhou Luo

Chem. Rev., 2025, 125, 523
DOI: 10.1021/acs.chemrev.4c00216

Advanced imaging and labelling methods to decipher brain cell organization and function

Daniel Choquet, Matthieu Sainlos and Jean-Baptiste Sibarita

Nat Rev Neurosci, 2021, 22, 237
DOI: 10.1038/s41583-021-00441-z

Perovskite Quantum Dots for Super‐Resolution Optical Microscopy: Where Strong Photoluminescence Blinking Matters

Leon G. Feld, Yevhen Shynkarenko, Franziska Krieg, Gabriele Rainò and Maksym V. Kovalenko

Advanced Optical Materials, 2021, 9
DOI: 10.1002/adom.202100620

Supramolecular Guest Exchange in Cucurbit[7]uril for Bioorthogonal Fluorogenic Imaging across the Visible Spectrum

Ranjan Sasmal, Arka Som, Pratibha Kumari, Resmi V. Nair, Sushanta Show, Nisha Sanjay Barge, Meenakshi Pahwa, Nilanjana Das Saha, Sushma Rao, Sheeba Vasu, Rachit Agarwal and Sarit S. Agasti

ACS Cent. Sci., 2024, 10, 1945
DOI: 10.1021/acscentsci.4c01080

Regioisomer‐Tuned Rhodamine Spirolactone‐Zwitterion Equilibrium for Fluorogenic Probe Design and Super‐Resolution Plasma Membrane Imaging

Yi Tao, Jie Pan, Shaowei Wu, Shurui Hu, Yinchan Zhang, Pengjun Bao, Qinglong Qiao and Zhaochao Xu

Small, 2026, 22
DOI: 10.1002/smll.73246

Heavy metal sensors and sequestrating agents based on polyaromatic copolymers and hydrogels

Aula A Alwattar, Athir Haddad, Joshua Moore, Mubark Alshareef, Cian Bartlam, Adam W Woodward, Louise S Natrajan, Stephen G Yeates and Peter Quayle

Polymer International, 2021, 70, 59
DOI: 10.1002/pi.6086

Comparison of the SMLM technique and the MSSR algorithm in confocal microscopy for super‐resolved imaging of cellulose fibres

Josué David Hernández‐Varela, Susana Dianey Gallegos‐Cerda, José Jorge Chanona‐Pérez, Liliana Edith Rojas Candelas and Eduardo Martínez‐Mercado

Journal of Microscopy, 2024, 296, 184
DOI: 10.1111/jmi.13287

A Fluorogenic Reaction for Monitoring Cross-Coupling with Turn-On Ratio Greater than a Hundred Thousand

Rachel V. Czerwinski, Benjamin A. Brewster, Sunil P. Upadhyay, Andrew C. Cavell, Veronica K. Krasecki, Mackinsey A. Smith, Jeffrey Bartz and Randall H. Goldsmith

Chemical & Biomedical Imaging, 2026, 4, 199
DOI: 10.1021/cbmi.5c00103

Photoactivatable Fluorescent Dyes with Hydrophilic Caging Groups and Their Use in Multicolor Nanoscopy

Alexey N. Butkevich, Michael Weber, Angel R. Cereceda Delgado, Lynn M. Ostersehlt, Elisa D’Este and Stefan W. Hell

J. Am. Chem. Soc., 2021, 143, 18388
DOI: 10.1021/jacs.1c09999

Insight into Fluorescence Imaging and Bioorthogonal Reactions in Biological Analysis

Yuexiang Ma, Qinhua Chen, Xiaoyan Pan and Jie Zhang

Top Curr Chem (Z), 2021, 379
DOI: 10.1007/s41061-020-00323-5

Stereochemistry‐Dependent Labeling of Organelles with a Near‐Infrared‐Emissive Phosphorus‐Bridged Rhodamine Dye in Live‐Cell Imaging

Qian Wu, Masayasu Taki, Yoshiki Tanaka, Manish Kesherwani, Quan Manh Phung, Sawako Enoki, Yasushi Okada, Florence Tama and Shigehiro Yamaguchi

Angew Chem Int Ed, 2024, 63
DOI: 10.1002/anie.202400711

Fluorescent Nanoparticles for Super-Resolution Imaging

Wei Li, Gabriele S. Kaminski Schierle, Bingfu Lei, Yingliang Liu and Clemens F. Kaminski

Chem. Rev., 2022, 122, 12495
DOI: 10.1021/acs.chemrev.2c00050

Bioorthogonal labeling with tetrazine-dyes for super-resolution microscopy

Gerti Beliu, Andreas J. Kurz, Alexander C. Kuhlemann, Lisa Behringer-Pliess, Mara Meub, Natalia Wolf, Jürgen Seibel, Zhen-Dan Shi, Martin Schnermann, Jonathan B. Grimm, Luke D. Lavis, Sören Doose and Markus Sauer

Commun Biol, 2019, 2
DOI: 10.1038/s42003-019-0518-z

The potential of fluorogenicity for single molecule FRET and DyeCycling

Srijayee Ghosh and Sonja Schmid

QRB Discovery, 2024, 5
DOI: 10.1017/qrd.2024.11

Fluorescent Carbon Dots for Super-Resolution Microscopy

Xiangcheng Sun and Nazanin Mosleh

Materials, 2023, 16, 890
DOI: 10.3390/ma16030890

Hybrid Small-Molecule/Protein Fluorescent Probes

Masafumi Minoshima, Shahi Imam Reja, Ryu Hashimoto, Kohei Iijima and Kazuya Kikuchi

Chem. Rev., 2024, 124, 6198
DOI: 10.1021/acs.chemrev.3c00549

Softness Meets with Brightness: Dye‐Doped Multifunctional Fluorescent Polymer Particles via Microfluidics for Labeling

Nikunjkumar R. Visaveliya and Johann Michael Köhler

Advanced Optical Materials, 2021, 9
DOI: 10.1002/adom.202002219

N4-phenylquinazoline-4,6-diamine as a tunable fluorescent scaffold for the development of fluorescent probes

Jaeseok Lee, Sang-Kee Choi, Adil S. Aslam, Woojeong Lim, Juyong Lee, Junsu Ko, Chan Hee Ryu, Kang Mun Lee, Young Mee Jung, Hyuk Sang Yoo, Ju Hyun Park, Sanghee Lee, Junwon Choi, Eunha Kim and Jongmin Park

Dyes and Pigments, 2023, 210, 110987
DOI: 10.1016/j.dyepig.2022.110987

Choosing the Probe for Single-Molecule Fluorescence Microscopy

Chiara Schirripa Spagnolo and Stefano Luin

IJMS, 2022, 23, 14949
DOI: 10.3390/ijms232314949

Genetically Encoded Tools for Research of Cell Signaling and Metabolism under Brain Hypoxia

Alexander I. Kostyuk, Aleksandra D. Kokova, Oleg V. Podgorny, Ilya V. Kelmanson, Elena S. Fetisova, Vsevolod V. Belousov and Dmitry S. Bilan

Antioxidants, 2020, 9, 516
DOI: 10.3390/antiox9060516

Green‐Emitting Rhodamine Dyes for Vital Labeling of Cell Organelles Using STED Super‐Resolution Microscopy

Florian Grimm, Shamil Nizamov and Vladimir N. Belov

ChemBioChem, 2019, 20, 2248
DOI: 10.1002/cbic.201900177

Fluorogenic Squaraine Dendrimers for Background‐Free Imaging of Integrin Receptors in Cancer Cells

Pichandi Ashokkumar, Mayeul Collot and Andrey S. Klymchenko

Chemistry A European J, 2021, 27, 6795
DOI: 10.1002/chem.202100480

A Blue Light and Two‐Photon Activatable Rhodamine Fluorophore

Rebekka Weber, Stephan Junek and Alexander Heckel

Chemistry A European J, 2023, 29
DOI: 10.1002/chem.202300997

Two‐Factor Fluorogenic Cyanine‐Styryl Dyes with Yellow and Red Fluorescence for Bioorthogonal Labelling of DNA

Bastian Pfeuffer, Philipp Geng and Hans‐Achim Wagenknecht

ChemBioChem, 2024, 25
DOI: 10.1002/cbic.202300739

Molecular probes for super-resolution imaging of drug dynamics

Hongbao Fang, Mengmeng Wang, Pengfan Wei, Qian Liu, Yan Su, Hongke Liu, Yuncong Chen, Zhi Su and Weijiang He

Advanced Drug Delivery Reviews, 2024, 210, 115330
DOI: 10.1016/j.addr.2024.115330

Synthesis, spectroscopic and computational evaluation of a xanthene-based fluorogenic derivatization reagent for the determination of primary amines

Amalia D. Kalampaliki, Steve Vincent, Suman Mallick, Hoang-Ngoan Le, Guillaume Barnoin, Yogesh W. More, Alain Burger, Yannis Dotsikas, Evagelos Gikas, Benoît Y. Michel and Ioannis K. Kostakis

Dyes and Pigments, 2021, 196, 109798
DOI: 10.1016/j.dyepig.2021.109798

Fluorogenic Protein Probes with Red and Near‐Infrared Emission for Genetically Targeted Imaging**

Sylvestre P. J. T. Bachollet, Cyril Addi, Nicolas Pietrancosta, Jean‐Maurice Mallet and Blaise Dumat

Chemistry A European J, 2020, 26, 14467
DOI: 10.1002/chem.202002911

Beyond the Bioorthogonal Inverse-Electron-Demand Diels–Alder Reactions of Tetrazines: 2-Pyrone-Functionalized Fluorogenic Probes

Gergely B. Cserép, Krisztina Németh, Ágnes Szatmári, Flóra Horváth, Tímea Imre, Krisztina Németh and Péter Kele

Synthesis, 2022, 54, 3858
DOI: 10.1055/a-1761-4672

Imaging mitochondria and plasma membrane in live cells using solvatochromic styrylpyridines

Tarushyam Mukherjee, M Aravintha Siva, Komal Bajaj, Virupakshi Soppina and Sriram Kanvah

Journal of Photochemistry and Photobiology B: Biology, 2020, 203, 111732
DOI: 10.1016/j.jphotobiol.2019.111732

Bleaching‐Resistant Super‐Resolution Fluorescence Microscopy

Jiwoong Kwon, Mohamed Saleh Elgawish and Sang‐Hee Shim

Advanced Science, 2022, 9
DOI: 10.1002/advs.202101817

Viral Membrane-Targeting Amphipathic Helical Peptide-Based Fluorogenic Probes for the Analysis of Infectious Titers of Enveloped Viruses

Yusuke Sato, Yusaku Hatanaka, Yoshitaka Sato, Kota Matsumoto, Shion Osana, Ryoichi Nagatomi and Seiichi Nishizawa

Anal. Chem., 2025, 97, 5480
DOI: 10.1021/acs.analchem.4c04852

Bioorthogonal Fluorescence Turn‐On Labeling Based on Bicyclononyne−Tetrazine Cycloaddition Reactions that Form Pyridazine Products

Sebastian J. Siegl, Juraj Galeta, Rastislav Dzijak, Martin Dračínský and Milan Vrabel

ChemPlusChem, 2019, 84, 493
DOI: 10.1002/cplu.201900176

Rhodamines with a Chloronicotinic Acid Fragment for Live Cell Superresolution STED Microscopy**

Florian Grimm, Jasmin Rehman, Stefan Stoldt, Taukeer A. Khan, Jan Gero Schlötel, Shamil Nizamov, Michael John, Vladimir N. Belov and Stefan W. Hell

Chemistry A European J, 2021, 27, 6070
DOI: 10.1002/chem.202005134

Fluorescent labeling strategies for molecular bioimaging

Marcel Streit, Made Budiarta, Marvin Jungblut and Gerti Beliu

Biophysical Reports, 2025, 5, 100200
DOI: 10.1016/j.bpr.2025.100200

Far-red to NIR emitting xanthene-based fluorophores

Zeba Khan and Nagaiyan Sekar

Dyes and Pigments, 2023, 208, 110735
DOI: 10.1016/j.dyepig.2022.110735

Bioorthogonal Caging-Group-Free Photoactivatable Probes for Minimal-Linkage-Error Nanoscopy

Ayse Aktalay, Richard Lincoln, Lukas Heynck, Maria Augusta do R. B. F. Lima, Alexey N. Butkevich, Mariano L. Bossi and Stefan W. Hell

ACS Cent. Sci., 2023, 9, 1581
DOI: 10.1021/acscentsci.3c00746

Bioorthogonal Reactions in Bioimaging

Eszter Kozma and Péter Kele

Top Curr Chem (Z), 2024, 382
DOI: 10.1007/s41061-024-00452-1

Modular Synthetic Approach to Silicon-Rhodamine Homologues and Analogues via Bis-aryllanthanum Reagents

Alexey N. Butkevich

Org. Lett., 2021, 23, 2604
DOI: 10.1021/acs.orglett.1c00512

Single Molecule Techniques Can Distinguish the Photophysical Processes Governing Metal-Enhanced Fluorescence

Gregory K. Hodgson, Nicholas P. Dogantzis and Stefania Impellizzeri

J. Phys. Chem. C, 2020, 124, 28298
DOI: 10.1021/acs.jpcc.0c09157

Defining the Basis of Cyanine Phototruncation Enables a New Approach to Single-Molecule Localization Microscopy

Siddharth S. Matikonda, Dominic A. Helmerich, Mara Meub, Gerti Beliu, Philip Kollmannsberger, Alexander Greer, Markus Sauer and Martin J. Schnermann

ACS Cent. Sci., 2021, 7, 1144
DOI: 10.1021/acscentsci.1c00483

Bioothogonally applicable, π-extended rhodamines for super-resolution microscopy imaging for intracellular proteins

Alexandra Egyed, Attila Kormos, Bianka Söveges, Krisztina Németh and Péter Kele

Bioorganic & Medicinal Chemistry, 2020, 28, 115218
DOI: 10.1016/j.bmc.2019.115218

Continuous Flow Bioconjugations of NIR‐AZA Fluorophores via Strained Alkyne Cycloadditions with Intra‐Chip Fluorogenic Monitoring**

Sheila Fitzgerald and Donal F. O'Shea

Chemistry A European J, 2022, 28
DOI: 10.1002/chem.202104111

Recent Endeavors on Molecular Imaging for Mapping Metals in Biology

Jing Gao, Yuncong Chen, Zijian Guo and Weijiang He

Biophys Rep, 2020, 6, 159
DOI: 10.1007/s41048-020-00118-7

Super-Resolution Microscopy and Their Applications in Food Materials: Beyond the Resolution Limits of Fluorescence Microscopy

Susana Dianey Gallegos-Cerda, Josué David Hernández-Varela, José Jorge Chanona-Pérez, Benjamín Arredondo Tamayo and Juan Vicente Méndez Méndez

Food Bioprocess Technol, 2023, 16, 268
DOI: 10.1007/s11947-022-02883-4