Themed collection Showcasing the Breadth of Physical Chemistry Chemical Physics Research in Canada

46 items
Open Access Tutorial Review

An efficient workflow for generation of conformational ensembles of density functional theory quality: dimers of polycyclic (hetero-)aromatics

The computational determination of geometries and relative binding (or free) energies of ensembles of dimers is important for understanding both their properties and corresponding spectroscopic measurement.

Graphical abstract: An efficient workflow for generation of conformational ensembles of density functional theory quality: dimers of polycyclic (hetero-)aromatics
Tutorial Review

On the application of Marcus–Hush theory to small polaron chemical dynamics in oxides: its relationship to the Holstein model and the importance of lattice–orbital symmetries

The chemical dynamics of small polaron hopping within oxides is often interpreted through two-site variations on Marcus–Hush theory, while from a physics perspective small polaron hopping is more often approached from Holstein's solid-state formalism.

Graphical abstract: On the application of Marcus–Hush theory to small polaron chemical dynamics in oxides: its relationship to the Holstein model and the importance of lattice–orbital symmetries
Open Access Paper

Fusion of pyrene and phenanthrene through 5H-imidazo[1,2-a]azepine scaffolds: structural tuning for fluorescence labeling and bacterial imaging

Polycyclic aromatic fluorophores featuring pyrene and phenanthrene fused through either an imidazo[1,2-a]azepinone or an imidazo[1,2-a]azepinol central ring show diverse molecular properties and fluorescence functions.

Graphical abstract: Fusion of pyrene and phenanthrene through 5H-imidazo[1,2-a]azepine scaffolds: structural tuning for fluorescence labeling and bacterial imaging
Open Access Paper

Robust methods for the characterization of droplet behavior in molecular dynamics: from contact radius to contact angle

We present a comparative analysis of methodologies for studies of wetting behavior of liquid nano-droplets.

Graphical abstract: Robust methods for the characterization of droplet behavior in molecular dynamics: from contact radius to contact angle
Paper

IAPP surface-induced aggregation and corilagin's inhibitory effect

Proteins and macromolecules spontaneously assemble into structures, while surface physical and chemical attributes impart their diverse morphologies.

Graphical abstract: IAPP surface-induced aggregation and corilagin's inhibitory effect
Open Access Paper

Interactions between calcium ion and functional groups of organic scale inhibitors in aqueous solutions: an ab initio study

Ion-pairing behavior of Ca2+ with representative functional groups of organic inhibitors in aqueous solutions.

Graphical abstract: Interactions between calcium ion and functional groups of organic scale inhibitors in aqueous solutions: an ab initio study
Open Access Paper

The product of NH3 loss from gas phase protonated tyrosine

This study provides novel experimental and computational data demonstrating a previously unknown energy pathway for the fragmentation of protonated tyrosine.

Graphical abstract: The product of NH3 loss from gas phase protonated tyrosine
Open Access Paper

Enhanced Cr(VI) adsorption on nitrogen and sulfur functionalized granular activated carbon

N/S functionalization of granular activated carbon boosts Cr(VI) removal by integrating adsorption with reduction to Cr(III), offering improved capacity and a safer immobilization pathway.

Graphical abstract: Enhanced Cr(vi) adsorption on nitrogen and sulfur functionalized granular activated carbon
Paper

WTMAD-4: a fair weighting scheme for GMTKN55

A new weighted mean-absolute-deviation metric is proposed to provide a more balanced treatment of the GMTKN55 thermochemistry benchmark.

Graphical abstract: WTMAD-4: a fair weighting scheme for GMTKN55
Open Access Paper

Photochemical transformation of weakly absorbing organics by visible light in microdroplets

Microdroplets enable photochemical transformations of weakly absorbing organic solutes.

Graphical abstract: Photochemical transformation of weakly absorbing organics by visible light in microdroplets
Open Access Paper

The simulation of X-ray absorption spectra including vibronic coupling: application of the QD-DFT/MRCI(2) method

The QD-DFT/MRCI(2) method is used to construct anharmonic vibronic models that are employed to simulate X-ray absorption spectra with very high accuracy.

Graphical abstract: The simulation of X-ray absorption spectra including vibronic coupling: application of the QD-DFT/MRCI(2) method
Open Access Paper

Monoterpene flash pyrolysis reveals weakly coupled mechanistic domains and fleeting biradical intermediates

Photoion mass-selected photoelectron spectra by PEPICO, product matrix factorization, and calculations including open-shell singlet states show disjunct and coupled mechanistic domains in the high-temperature fast pyrolysis of three monoterpenes.

Graphical abstract: Monoterpene flash pyrolysis reveals weakly coupled mechanistic domains and fleeting biradical intermediates
Open Access Paper

High-throughput screening and DFT characterization of bimetallic alloy catalysts for the nitrogen reduction reaction

Machine learning is used to screen bimetallic surface alloys, while electronic structure insights enable the design of electrocatalysts with improved activity and selectivity for nitrogen reduction reaction.

Graphical abstract: High-throughput screening and DFT characterization of bimetallic alloy catalysts for the nitrogen reduction reaction
Open Access Paper

Third-order nonlinear optical properties of a series of pyrroles and dipyrroles featuring π-conjugated substituents and linkers

The third-order nonlinear optical properties of a series of novel pyrrole-containing compounds were explored.

Graphical abstract: Third-order nonlinear optical properties of a series of pyrroles and dipyrroles featuring π-conjugated substituents and linkers
Open Access Paper

Modeling CH3SOH–aromatic complexes to probe cysteine sulfenic acid–aromatic interactions in proteins

CH3SOH, a Cys sulfenic acid model, forms stable complexes with aromatic side chain of Phe, Trp, Tyr and His in the gas phase and water. Complex stability and redox traits depend on medium and geometry, showing how aromatics regulate CysOH reactivity.

Graphical abstract: Modeling CH3SOH–aromatic complexes to probe cysteine sulfenic acid–aromatic interactions in proteins
Open Access Paper

Adsorption modes of cysteine on gold: from neutral molecules to unconventional zwitterions

Modelling of vacuum deposition of cysteine on Au(111) surfaces reveals a highly stable unconventional zwitterionic state, where the proton is transferred from the thiol to the amino group. The transfer can occur directly or via the carboxylic group.

Graphical abstract: Adsorption modes of cysteine on gold: from neutral molecules to unconventional zwitterions
Open Access Paper

Partition constants of alcohols and surfactants in mixed alcohol/10-carbon dimeric amphiphile aggregates from NMR-diffusion experiments

Stacked 1H NMR spectra for 6 μL of 1-butanol in 50 mg mL−1 of a gemini surfactant (10-6-10) shows clear differences in the attenuation of the water peak (at 4.70 ppm), some alcohol protons (α-CH2 at ∼3.5 ppm), and selected surfactant resonances.

Graphical abstract: Partition constants of alcohols and surfactants in mixed alcohol/10-carbon dimeric amphiphile aggregates from NMR-diffusion experiments
Open Access Paper

Low temperature jet spectra of (DFE)2, DFE-He, DFE-He2 and DFE in the 2210–3105 cm−1 region (DFE = 1,1 difluoroethylene)

Geometry optimization at the B2PLYP and B3LYP levels of theory lead to a dimer with C2h symmetry. However, both MP2 and rev-DSDPBEP86 calculations lead to a different optimized geometry in which the two DFE monomers are slightly twisted with respect to each other (C2 symmetry).

Graphical abstract: Low temperature jet spectra of (DFE)2, DFE-He, DFE-He2 and DFE in the 2210–3105 cm−1 region (DFE = 1,1 difluoroethylene)
Open Access Paper

A multiscale computational and experimental study of TBA–fluorescent probes for protein sensing: photobasicity over twisted intramolecular charge transfer as a new mechanism for protein induced fluorescence enhancement

An AnBtz-modified TBA aptamer enhances thrombin detection via a unique photobase-driven fluorescence mechanism, outperforming cationic probes that rely on twisted intramolecular charge transfer (TICT) suppression.

Graphical abstract: A multiscale computational and experimental study of TBA–fluorescent probes for protein sensing: photobasicity over twisted intramolecular charge transfer as a new mechanism for protein induced fluorescence enhancement
Open Access Paper

Vetting molecular candidates posited for the first diffuse interstellar bands (5780 and 5797 Å): a quantum chemical study

Diffuse interstellar bands (DIBs) comprise over 550 celestial absorption features whose molecular carriers remain largely unidentified or contested.

Graphical abstract: Vetting molecular candidates posited for the first diffuse interstellar bands (5780 and 5797 Å): a quantum chemical study
Open Access Paper

Assessment of a foundational machine-learned potential for energy ranking of molecular crystal polymorphs

The MACE-OFF23(M) machine-learned potential holds promise for crystal structure prediction of compounds similar to its training data, but not for new or little-sampled functional groups or organic salts.

Graphical abstract: Assessment of a foundational machine-learned potential for energy ranking of molecular crystal polymorphs
Open Access Paper

In silico screening of photostabilizing reagents for cyanine-based single molecule fluorescence

A predictive computational model to screen for the most efficient photostabilizers across the chemical space in single molecule fluorescence microscopy.

Graphical abstract: In silico screening of photostabilizing reagents for cyanine-based single molecule fluorescence
Open Access Paper

Janus group V1B-based pnictogen-halide monolayers: a new class of multifunctional quantum materials from first-principles predictions

A new family of 48 two-dimensional Janus monolayers with the formula MXY, where M stands for transition metals (Cr, Mo, or W), X represents a group V element (P, As, Sb, or Bi), and Y denotes a halide (F, Cl, Br, or I).

Graphical abstract: Janus group V1B-based pnictogen-halide monolayers: a new class of multifunctional quantum materials from first-principles predictions
Open Access Paper

Electrocatalytic reduction of nitrogen to ammonia on metal nanoclusters: insights and trends from d- and p-block metals

Nitrogen reduction reaction (NRR) on d- and p-block metal nanoclusters reveals key trends in N2 activation and reduction pathways, offering insights to guide the design of sustainable ammonia electrocatalysts.

Graphical abstract: Electrocatalytic reduction of nitrogen to ammonia on metal nanoclusters: insights and trends from d- and p-block metals
Open Access Paper

Rotational and vibrational spectroscopy of a weakly bound hexafluoroisopropanol⋯dinitrogen complex: 14N hyperfine splittings, molecular geometry, and experimental benchmarks

Structure and internal dynamics of hexafluoroisopropanol⋯N2 were uncovered by rotational spectroscopy, aided by spin statistics analyses and ab initio calculations. The data from rotational and vibrational spectra serve as benchmarks for theory.

Graphical abstract: Rotational and vibrational spectroscopy of a weakly bound hexafluoroisopropanol⋯dinitrogen complex: 14N hyperfine splittings, molecular geometry, and experimental benchmarks
Open Access Paper

Advanced association theory for monoethylene glycol: thermodynamic perturbation theory, Monte Carlo simulation, and equation of state parametrization

Thermodynamic perturbation theory (TPT) is a breakthrough in developing an equation of state for systems containing hydrogen bonding.

Graphical abstract: Advanced association theory for monoethylene glycol: thermodynamic perturbation theory, Monte Carlo simulation, and equation of state parametrization
Open Access Paper

The role of the metal in metal/MoS2 and metal/Ca2N/MoS2 interfaces

The metal determines the interface properties for a metal/MoS2 interface, while it has little influence for a metal/Ca2N/MoS2 interface.

Graphical abstract: The role of the metal in metal/MoS2 and metal/Ca2N/MoS2 interfaces
Open Access Paper

Solid state NMR and DFT studies of azo–hydrazone tautomerism in azo dyes and chitosan-dye films

The hydrazone form of two azo food dyes, as revealed by NMR with DFT, predominates in solution and solid chitosan films, having important implications for development of these dye-polymer films into light-triggered recyclable bioplastics.

Graphical abstract: Solid state NMR and DFT studies of azo–hydrazone tautomerism in azo dyes and chitosan-dye films
Open Access Paper

Local order, disorder, and everything in between: using 91Zr solid-state NMR spectroscopy to probe zirconium-based metal–organic frameworks

91Zr solid-state NMR spectroscopy provides rich information regarding the local structure and short-range order about Zr(IV) centers in metal–organic frameworks.

Graphical abstract: Local order, disorder, and everything in between: using 91Zr solid-state NMR spectroscopy to probe zirconium-based metal–organic frameworks
Open Access Paper

Ligand impacts on band edge energies and excited state splittings of silicane

Ligand functionalization leads to enormous ranges of band edge energies of silicanes. The band edge energies can be predicted by empirical functions.

Graphical abstract: Ligand impacts on band edge energies and excited state splittings of silicane
Open Access Paper

1H isotropic chemical shift metrics for NMR crystallography of powdered molecular organics

Proton isotropic chemical shift metrics are robust to substantial reduction in GIPAW DFT computational quality. This finding should allow for more efficient NMR crystallography studies.

Graphical abstract: 1H isotropic chemical shift metrics for NMR crystallography of powdered molecular organics
Open Access Paper

Two-photon absorption of BODIPY, BIDIPY, GADIPY, and SBDIPY

Two-photon absorption (2PA) properties of BODIPY, BIDIPY, GADIPY, and SBDIPY were investigated using TD-DFT and RI-CC2. Core substitution (Ga, Sb, Bi) has minimal impact on 2PA cross-sections, while extended conjugation significantly enhances them.

Graphical abstract: Two-photon absorption of BODIPY, BIDIPY, GADIPY, and SBDIPY
Paper

Comprehensive DFT investigation of small-molecule adsorption on the paradigm M-MOF-74 family of metal–organic frameworks

The design of advanced metal–organic-framework materials is essential for efficient capture of toxic chemicals such as NH3, H2S, NO2 and SO2 to prevent their adverse impact on human health and the environment.

Graphical abstract: Comprehensive DFT investigation of small-molecule adsorption on the paradigm M-MOF-74 family of metal–organic frameworks
Paper

Dissociation of adsorbates via electronic energy transfer from aromatic thin films

Photofragment translational spectroscopy has been used to characterize the energetics and the cross sections for photodissociation of CH3I and CF3I adsorbed on thin films of a variety of aromatic molecules, initiated by near-UV light.

Graphical abstract: Dissociation of adsorbates via electronic energy transfer from aromatic thin films
Paper

The retinal chromophore environment in an inward light-driven proton pump studied by solid-state NMR and hydrogen-bond network analysis

The mechanism of inward proton transport in a microbial rhodopsin suggested by solid-state NMR spectroscopy and molecular dynamics simulations.

Graphical abstract: The retinal chromophore environment in an inward light-driven proton pump studied by solid-state NMR and hydrogen-bond network analysis
Paper

Conformational adaptation and large amplitude motions of 1-phenyl-2,2,2-trifluoroethanol with two water molecules: a rotational spectroscopic and ab initio investigation

The conformational dynamics of 1-phenyl-2,2,2-trifluoroethanol⋯water2 was explored with rotational spectroscopy and extensive theoretical modelling which reveal the interplay of several large amplitude motions including water tunnelling.

Graphical abstract: Conformational adaptation and large amplitude motions of 1-phenyl-2,2,2-trifluoroethanol with two water molecules: a rotational spectroscopic and ab initio investigation
Paper

Small but bright: origin of the enhanced luminescence of ultrasmall ZnGa2O4:Cr3+ in mesoporous silica nanoparticles

Mesoporous silica plays an active role in improving the persistence luminescence properties of sub-5 nm ZnGa2O4:Cr3+ nanoparticles.

Graphical abstract: Small but bright: origin of the enhanced luminescence of ultrasmall ZnGa2O4:Cr3+ in mesoporous silica nanoparticles
Paper

New insight into impact of humidity on direct air capture performance by SIFSIX-3-Cu MOF

Removal of CO2 from air is one of the key human challenges in battling global warming.

Graphical abstract: New insight into impact of humidity on direct air capture performance by SIFSIX-3-Cu MOF
Paper

A two-step quadrature-based variational calculation of ro-vibrational levels and wavefunctions of CO2 using a bisector-x molecule-fixed frame

In this paper, we propose a new two-step strategy for computing ro-vibrational energy levels and wavefunctions of a triatomic molecule and apply it to CO2.

Graphical abstract: A two-step quadrature-based variational calculation of ro-vibrational levels and wavefunctions of CO2 using a bisector-x molecule-fixed frame
Paper

Simultaneous switching of two different CO2-switchable amines in the same solution

The application or removal of CO2 can simultaneously trigger the switching of two different amines, but only if limitations on basicity and concentration are met.

Graphical abstract: Simultaneous switching of two different CO2-switchable amines in the same solution
Paper

Cs+ conductance in graphene membranes with Ångström-scale pores: the role of pore entrance geometry

Varying pore entrance geometry reveals up to 100% change in ionic conductance for the transport of Cs+ ions in graphene membranes with 3.4 Å pores.

Graphical abstract: Cs+ conductance in graphene membranes with Ångström-scale pores: the role of pore entrance geometry
Paper

N-heterocyclic carbene adsorption states on Pt(111) and Ru(0001)

NHC states on two reactive metal surfaces.

Graphical abstract: N-heterocyclic carbene adsorption states on Pt(111) and Ru(0001)
Paper

Applications of noisy quantum computing and quantum error mitigation to “adamantaneland”: a benchmarking study for quantum chemistry

Modeling isomers of C10H16 and carbocationic rearrangements of C10H15+ using the variational quantum eigensolver algorithm and quantum state tomography correction.

Graphical abstract: Applications of noisy quantum computing and quantum error mitigation to “adamantaneland”: a benchmarking study for quantum chemistry
Paper

Solvent effects on the intramolecular charge transfer excited state of 3CzClIPN: a broadband transient absorption study

Broadening of intramolecular charge-transfer excited-state absorption of 3CzClIPN in aromatic solvents: a local probe of the medium's polarity.

Graphical abstract: Solvent effects on the intramolecular charge transfer excited state of 3CzClIPN: a broadband transient absorption study
Paper

Perovskenes: two-dimensional perovskite-type monolayer materials predicted by first-principles calculations

Perovskenes: a novel family of high-stability two-dimensional perovskite-type monolayer materials with predicted electronic, optical, and thermoelectric properties predicted via first-principles calculations.

Graphical abstract: Perovskenes: two-dimensional perovskite-type monolayer materials predicted by first-principles calculations
Paper

In situ monitoring of mechanochemical MOF formation by NMR relaxation time correlation

We present a new approach to monitoring mechanochemical transformations, using a magnetic resonance (MR) method in which relaxation time correlation maps are used to follow the formation of metal–organic frameworks (MOFs) Zn-MOF-74 and ZIF-8.

Graphical abstract: In situ monitoring of mechanochemical MOF formation by NMR relaxation time correlation
46 items

About this collection

Physical Chemistry Chemical Physics is co-owned by 19 learned societies, including the Canadian Society for Chemistry (CSC). This collection celebrates the involvement of CSC in the journal and showcases excellence in physical chemistry and chemical physics research in Canada.

This themed collection is guest edited by Alex Brown (University of Alberta, Canada).

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