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Journal cover: Molecular BioSystems

Molecular BioSystems

Research at the interface of chemistry and biology: chemical biology, -omics sciences and systems biology.
Impact Factor 2.829 12 Issues per Year Indexed in Medline
 
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Molecular BioSystems,
01 August 2016 , Issue 8,
Page 2307 to 2654
Yongzhong Zhao, Christian V. Forst, Camil E. Sayegh, I-Ming Wang, Xia Yang and Bin Zhang
Mol. BioSyst., 2016, 12, 2318-2341
DOI: 10.1039/C6MB00240D, Review Article
Omics data alongside the advances in data integration technologies have enabled reconstruction of molecular and genetic inflammation networks which shed light on the underlying pathophysiology of complex diseases or clinical conditions.
 
Asier Galán, Lubos Comor, Anita Horvatić, Josipa Kuleš, Nicolas Guillemin, Vladimir Mrljak and Mangesh Bhide
Mol. BioSyst., 2016, 12, 2342-2358
DOI: 10.1039/C6MB00219F, Review Article
From themed collection 2016 Hot Articles in Molecular BioSystems
Display technology is a collection of methods for creating libraries of modularly coded biomolecules and submit them to directed evolution to obtain arrays of desired properties with multiple applications.
 
M. F. Addis, A. Tanca, S. Uzzau, G. Oikonomou, R. C. Bicalho and P. Moroni
Mol. BioSyst., 2016, 12, 2359-2372
DOI: 10.1039/C6MB00217J, Review Article
From themed collection Omics in Animal Sciences
Recent findings and future perspectives of -omics studies on the bovine milk microbiota, focusing on its impact on animal health.
 
Anita Horvatić, Josipa Kuleš, Nicolas Guillemin, Asier Galan, Vladimir Mrljak and Mangesh Bhide
Mol. BioSyst., 2016, 12, 2373-2384
DOI: 10.1039/C6MB00223D, Review Article
From themed collection Omics in Animal Sciences
Pathogens pose a major threat to human and animal welfare. Understanding the interspecies host–pathogen protein–protein interactions could lead to the development of novel strategies to combat infectious diseases through the rapid development of new therapeutics.
 
Mol. BioSyst., 2016, 12, 2385-2388
DOI: 10.1039/C6MB00385K, Communication
Data-independent acquisition (DIA) is here applied to determine unexplored phosphorylation events on isobarically modified peptides.
 
Nobuaki Takemori, Ayako Takemori, Yuki Tanaka, Jun Ishizaki, Hitoshi Hasegawa, Atsushi Shiraishi and Yuichi Ohashi
Mol. BioSyst., 2016, 12, 2389-2393
DOI: 10.1039/C6MB00209A, Communication
From themed collection 2016 Hot Articles in Molecular BioSystems
Development of a reference peptide library for selected reaction monitoring (SRM)-based targeted proteomics using a high-throughput protein synthesis system.
 
Amphun Chaiboonchoe, Lila Ghamsari, Bushra Dohai, Patrick Ng, Basel Khraiwesh, Ashish Jaiswal, Kenan Jijakli, Joseph Koussa, David R. Nelson, Hong Cai, Xinping Yang, Roger L. Chang, Jason Papin, Haiyuan Yu, Santhanam Balaji and Kourosh Salehi-Ashtiani
Mol. BioSyst., 2016, 12, 2394-2407
DOI: 10.1039/C6MB00237D, Paper
From themed collection 2016 Hot Articles in Molecular BioSystems
Topological and functional analyses of Chlamydomonas metabolic network offers insight into fluidity of gene-pair co-conservation dynamics.
 
Mol. BioSyst., 2016, 12, 2408-2416
DOI: 10.1039/C6MB00259E, Paper
From themed collection Chemical Biology in Molecular BioSystems
Unique C–H⋯S hydrogen bonding interactions allow nature to attain recognition specificity between molecular interfaces where there is no apparent scope for classical hydrogen bonding or polar interactions.
 
Mol. BioSyst., 2016, 12, 2417-2426
DOI: 10.1039/C6MB00304D, Paper
From themed collection Chemical Biology in Molecular BioSystems
Reversible protonation of histidine at the dimer interface of HucR controls interconversion between molten globule and compact folded state.
 
Hamid D. Ismail, Robert H. Newman and Dukka B. KC
Mol. BioSyst., 2016, 12, 2427-2435
DOI: 10.1039/C6MB00179C, Paper
From themed collection 2016 Hot Articles in Molecular BioSystems
Protein hydroxylation is an emerging posttranslational modification involved in both normal cellular processes and a growing number of pathological states, including several cancers.
 
Alexandra Brietz, Kristin Verena Schuch, Gaby Wangorsch, Kristina Lorenz and Thomas Dandekar
Mol. BioSyst., 2016, 12, 2436-2446
DOI: 10.1039/C6MB00255B, Paper
From themed collection Chemical Biology in Molecular BioSystems
The ERK cascade (e.g. Raf-1) protects the heart from cell death and ischemic injury but can also turn maladaptive.
 
V. M. R. Pires, M. S. Madeira, A. A. Dowle, J. Thomas, A. M. Almeida and J. A. M. Prates
Mol. BioSyst., 2016, 12, 2447-2457
DOI: 10.1039/C6MB00213G, Paper
From themed collection Omics in Animal Sciences
Reduced protein diets affects the amounts of proteins related to fibre type and structure and energy.
 
S. Mohana, M. Ganesan, B. Agilan, R. Karthikeyan, G. Srithar, R. Beaulah Mary, D. Ananthakrishnan, D. Velmurugan, N. Rajendra Prasad and Suresh V. Ambudkar
Mol. BioSyst., 2016, 12, 2458-2470
DOI: 10.1039/C6MB00187D, Paper
From themed collection Chemical Biology in Molecular BioSystems
P-Glycoprotein (P-gp) serves as a therapeutic target for the development of inhibitors to overcome multidrug resistance in cancer cells.
 
Kusal T. G. Samarasinghe, Dhanushka N. P. Munkanatta Godage, Yani Zhou, Fidelis T. Ndombera, Eranthie Weerapana and Young-Hoon Ahn
Mol. BioSyst., 2016, 12, 2471-2480
DOI: 10.1039/C6MB00175K, Paper
From themed collection Chemical Biology in Molecular BioSystems
Clickable glutathione was used for analyzing the reversible change of protein glutathionylation in response to glucose metabolism and mitochondrial ROS.
 
Mol. BioSyst., 2016, 12, 2481-2489
DOI: 10.1039/C6MB00324A, Paper
Structural and functional changes in glycated-HSA, isolated from diabetic patients, suggests it has a significant role in diabetes progression and kidney dysfunction.
 
Mol. BioSyst., 2016, 12, 2490-2505
DOI: 10.1039/C6MB00131A, Paper
The work demonstrates how cancer cells manage macromolecular synthesis and energy by maintaining coordination between PKM2 and enzymes catalyzing PPP.
 
Soma Mondal, Jagannath Jana, Pallabi Sengupta, Samarjit Jana and Subhrangsu Chatterjee
Mol. BioSyst., 2016, 12, 2506-2518
DOI: 10.1039/C6MB00218H, Paper
From themed collection Chemical Biology in Molecular BioSystems
The use of small molecules to arrest G-quadruplex structure has become a potential strategy for the development and design of a new class of anticancer therapeutics.
 
Mol. BioSyst., 2016, 12, 2519-2531
DOI: 10.1039/C6MB00066E, Paper
In this study, a novel MMP-9 inhibitor was identified using structure-based pharmacophore modeling, cross docking, binding free energy and molecular dynamics simulation studies.
 
Mol. BioSyst., 2016, 12, 2532-2540
DOI: 10.1039/C6MB00297H, Paper
A systematic strategy is described to optimize peptide selectivity between the MAPK family kinases JNK and p38 for epilepsy therapy.
 
Tien-Sheng Tseng, Show-Mei Chuang, Nai-Wan Hsiao, Yi-Wen Chen, Yu-Ching Lee, Chi-Chen Lin, Cheng Huang and Keng-Chang Tsai
Mol. BioSyst., 2016, 12, 2541-2551
DOI: 10.1039/C6MB00229C, Paper
From themed collection Chemical Biology in Molecular BioSystems
Cyclooxygenase (COX; EC: 1.14.99.1), the key enzyme in prostaglandin production in the human body, is a major pharmacological target for developing anti-inflammatory agents.
 
Reza Mohammadi, Jalil Fallah-Mehrabadi, Gholamreza Bidkhori, Javad Zahiri, Mohammad Javad Niroomand and Ali Masoudi-Nejad
Mol. BioSyst., 2016, 12, 2552-2561
DOI: 10.1039/C6MB00119J, Paper
Metabolic network models can be optimized for the production of desired materials like biofuels.
 
João Figueira, Pär Jonsson, Annelie Nordin Adolfsson, Rolf Adolfsson, Lars Nyberg and Anders Öhman
Mol. BioSyst., 2016, 12, 2562-2571
DOI: 10.1039/C6MB00233A, Paper
A procedure for NMR analysis of the human saliva metabolome, that can differentiate dementia patients from matched controls and identify discriminatory metabolites, is described.
 
Mol. BioSyst., 2016, 12, 2572-2586
DOI: 10.1039/C6MB00241B, Paper
Knowledge of the subcellular location (SCL) of viral proteins in the host cell is important for understanding their function in depth.
 
Mol. BioSyst., 2016, 12, 2587-2593
DOI: 10.1039/C6MB00221H, Paper
The nucleosome is the fundamental unit of eukaryotic chromatin, which participates in regulating different cellular processes.
 
Alexandar V., Pradeep G. Nayar, R. Murugesan, Shajahan S., Jayalakshmi Krishnan and Shiek S. S. J. Ahmed
Mol. BioSyst., 2016, 12, 2594-2604
DOI: 10.1039/C6MB00264A, Paper
We propose a novel systems biology approach that relates causative genes, interactomes and pathways to elucidate the risk factors mediating the molecular mechanisms and biomarkers of coronary heart disease for feasible diagnosis.
 

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37 citations
With the avalanche of DNA/RNA sequences generated in the post-genomic age, it is urgent to develop automated methods for analyzing the relationship between the sequences and their functions.
DOI: 10.1039/C5MB00155B
Published: 05 Jun 2015
27 citations
MicroRNA precursor identification is an important task in bioinformatics.
DOI: 10.1039/C5MB00050E
Published: 17 Feb 2015
31 citations
Mechanistic insight into the BSA–limonene interaction: biophysical and molecular docking approach.
DOI: 10.1039/C4MB00548A
Published: 23 Oct 2014

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