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NMR window of molecular complexity showing homeostasis in superorganisms

Abstract

NMR offers tremendous advantages in analyses of molecular complexity, such as crude bio-fluids, bio-extracts, and intact cells and tissues. Here we introduce recent applications of NMR approaches, as well as next generation sequencing (NGS), for the evaluation of human and environmental health (i.e., maintenance of a homeostatic state) based on metabolic and microbial profiling and data science. We describe useful database and web tools that are used to support these studies by facilitating the characterization of metabolites from complex NMR spectra. Because NMR spectra of metabolic mixtures can produce numerical matrix data (e.g., chemical shift versus intensity) with high reproducibility and inter-institution convertibility, advanced data science approaches, such as multivariate analysis and machine learning, are desirable; therefore, we also introduce informatics techniques derived from heterogeneously measured data, such as environmental microbiota, for the extraction of submerged information using data science approaches. We summarize recent studies of microbiomes that are based on these techniques and show that, particularly in human studies, NMR-based metabolic characterization of non-invasive samples, such as feces, can provide a large quantity of beneficial information regarding human health and disease.

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Publication details

The article was received on 19 Jun 2017, accepted on 23 Sep 2017 and first published on 26 Sep 2017


Article type: Critical Review
DOI: 10.1039/C7AN01019B
Citation: Analyst, 2017, Accepted Manuscript
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    NMR window of molecular complexity showing homeostasis in superorganisms

    J. Kikuchi and S. Yamada, Analyst, 2017, Accepted Manuscript , DOI: 10.1039/C7AN01019B

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