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Hyperfine adjustment of flexible pore-surface pockets enables smart recognition of gas size and quadrupole moment

Chun-Ting He , Zi-Ming Ye , Yan-Tong Xu , Dong-Dong Zhou , Hao-Long Zhou , Da Chen , Jie-Peng Zhang * and Xiao-Ming Chen
MOE Key Laboratory of Bioinorganic and Synthetic Chemistry, School of Chemistry, Sun Yat-Sen University, Guangzhou 510275, China. E-mail:

Received 13th July 2017 , Accepted 9th September 2017

First published on 11th September 2017

The pore size and framework flexibility of hosts are of vital importance for molecular recognition and related applications, but accurate control of these parameters is very challenging. We use the slight difference of metal ion size to achieve continuous hundredth-nanometer pore-size adjustments and drastic flexibility modulations in an ultramicroporous metal–organic framework, giving controllable N2 adsorption isotherm steps, unprecedented/reversed loading-dependence of H2 adsorption enthalpy, quadrupole-moment sieving of C2H2/CO2, and an exceptionally high working capacity for C2H2 storage under practical conditions (98 times that of an empty cylinder). In situ single-crystal X-ray diffraction measurements and multilevel computational simulations revealed the importance of pore-surface pockets, which utilize their size and electrostatic potential to smartly recognize the molecular sizes and quadruple moments of gas molecules to control their accessibility to the strongest adsorption sites.


Smart materials exhibiting adaptive responses or recognition to guest molecules are of paramount importance for applications in high-tech areas.1–3 Size matching between the host and guest is the most important aspect of molecular recognition.4–6 Generally, the host size is modified by changing the number of repeating building units, which can achieve size intervals as small as ca. 0.1–0.3 nm (e.g., cyclodextrins 0.14–0.21 nm,2 cucurbit[n]urils 0.14–0.26 nm,7 and zeolites 0.1 nm (ref. 8)), i.e., the diameter of an atom. Biomacromolecules such as proteins can precisely fit complicated molecules with additional help from shape matching, either through the lock-and-key or induced-fit (structural deformation) mechanisms.9,10 However, the available strategies for molecular recognition can hardly work for gas molecules with very small sizes and simple shapes.

Porous coordination polymers (PCPs), also known as metal–organic frameworks (MOFs), have been demonstrated as a promising type of host materials, mainly because of their readily tunable pore sizes/shapes11,12 and notable framework flexibilities.13–15 For instance, the channel size of the MOF-74 type structure has been systematically tuned from 1.0 nm to 8.5 nm with an interval of ca. 0.75 nm by stepwise addition of a phenyl ring into the organic linker.16 More precise adjustments can be reached using smaller spacers and/or changing the ligand side groups.17,18 Nevertheless, just like conventional hosts, the pore sizes of MOFs can be hardly tuned with a precision below 0.1 nm.

The structural transformations of flexible MOFs can be used to distinguish different guest molecules including gases.19,20 The gate-opening processes of flexible MOFs usually lead to selective adsorption of guest molecules with smaller sizes and higher polarities. Being similar to biomacromolecules, the adaptive dynamism of MOFs can realize molecular recognition without strict requirements of the pore sizes.21,22 However, on-demand control of framework flexibility is even more difficult than for pore size, because little knowledge has been developed to understand the relationship between framework structure (such as pore size) and framework flexibility.23,24

Besides changing the ligand spacer and/or side group, the modular structures of MOFs provide an additional parameter, i.e., the metal ion, for precise adjustment of the pore size. The frequently used first-row divalent transition metal ions (with octahedral geometry) possess ionic radii gradually changing from 0.97 Å for Mn(II) to 0.88 Å for Zn(II), a range in which the intervals between adjacent elements are far below 0.01 nm.25 To fully utilize the different radii of metal ions and to realize the recognition of small gas molecules, ultramicroporous structures with extremely short bridging ligands are necessary.26,27 Accordingly, three isostructural ultramicroporous metal azolate frameworks, namely [Zn3(vtz)6], [Mn3(vtz)6], and [Cd3(vtz)6] (MAF-123-Zn, MAF-123-Mn, and MAF-123-Cd; and for clarity hereafter denoted as Zn, Mn, and Cd, respectively; Hvtz = 1,2,3-triazole)28,29 were selected for the study.

Results and discussion

High-quality single crystals of Zn, Mn, and Cd were successfully obtained through high-temperature hydrothermal reactions (Fig. S1 and S2), which enabled precise determination of the host–guest structures. [M3(vtz)6] is a three-dimensional 4-connected dia type coordination framework constructed from vertex sharing Kuratowski-type M5(vtz)6-tetrahedra (Table S1),30 which embeds a pore system with the same dia topology consisting of small cavities and even smaller connecting channels (Fig. 1a). Benefiting from very short organic linkers (just one N–N bond length), the 0.01 nm differences between the metal ions effectively transfer to the pore sizes. The most important feature of the pore structure of [M3(vtz)6] is the presence of pore-surface pockets, which are defined by six vtz ligands arranged alternatively either parallel or perpendicular to the pore surface. The three parallel ones provide their electronegative N atoms for the pocket bottom, while the three perpendicular ones provide their electropositive H atoms for the pocket entrance. For Zn, Mn, and Cd, the entrance diameters are 2.2, 2.4, and 2.6 Å and the inner diameters/depths are 3.4/2.0, 3.6/2.1, and 3.8/2.2 Å, respectively (Fig. 1b–d).
image file: c7sc03067c-f1.tif
Fig. 1 (a) The framework and pore structure of [M3(vtz)6] (black dashed lines: linkers of the dia topology, yellow sphere: cavity of the pore system, green cylinders: channels connecting adjacent cavities, orange spheres: pore-surface pockets, and light green cylinders: pocket entrances). (b)–(d) Structures of the pore-surface pockets of Zn, Mn and Cd, respectively, in a static point of view (entrances are highlighted by light-green spheres with aperture diameters in the unit of Å).

N2 adsorption isotherms of Zn, Mn, and Cd show remarkably different shapes and uptakes (Fig. 2a, S3 and S4).28 Specifically, Zn shows a typical type-I isotherm with a saturation uptake of 1.0 N2/Zn, while Mn shows a two-step isotherm with saturation uptakes of 1.0 and 1.9 N2/Mn. Cd also shows a two-step isotherm, but its saturation uptakes are 0.8 and 2.0 N2/Cd. The observation of stoichiometric saturation uptakes, including 1.0 N2/Zn, 1.0 N2/Mn, and 2.0 N2/Cd, indicates the formation of commensurate and ordered host–guest structures under the corresponding conditions. The trends of initial onset adsorption pressure and total N2 uptake can be roughly explained by the different pore sizes, but the experimental pore volumes cannot fit the theoretical values (Table S2 and Fig. S5).

image file: c7sc03067c-f2.tif
Fig. 2 (a) Stoichiometric/non-stoichiometric N2 adsorption isotherms of [M3(vtz)6] measured at 77 K. (b) PES of a N2 molecule inserting into the pocket calculated using DFT based on rigid structures. D is the distance between the pocket entrance and the molecular centroid of N2. The insets are the three typical host–N2 structures for Mn. (c) Top and (d) side views of host–guest configurations of four kinds of pocket in the single-crystal structure of Cd·2N2. Thermal ellipsoids are drawn at 50% probability. The N2 molecule at Site-IIIa exhibits symmetry-induced 3-fold disorder.

The N2 adsorption mechanisms were studied using single crystal X-ray diffraction (SCXRD) at different gas loadings, with successful measurements obtained for [Zn3(vtz)6]·3N2 (Zn·N2), [Cd3(vtz)6]·1.5N2 (Cd·0.5N2), and [Cd3(vtz)6]·6N2 (Cd·2N2). The host framework in Zn·N2 is identical to Zn (Table S1). The channel center (Site-I) and the cavity center (Site-II) are fully occupied to give a total of 3 N2 molecules per formula unit (hereafter, per formula unit is denoted as /unit) of Zn, being consistent with the experimental saturation uptake of 1.0 N2/Zn. The N2 molecule at Site-I exhibits a significantly smaller thermal parameter and less disorder (Fig. S6). Grand Canonical Monte Carlo (GCMC) simulations further confirmed Site-I as the primary adsorption site (Fig. S7). Although the N2 molecules show more disorder due to the large pore size and partial occupancy, the host–guest structure and relative binding affinities of Site-I and Site-II in Cd·0.5N2 are very similar to those of Zn·N2 (Fig. S8).

Interestingly, Cd·2N2 possesses a distorted host framework with a slightly expanded (0.6%) unit cell (Table S1), giving two kinds of dia cage (Cage-I and Cage-II) and two kinds of channel (Site-Ia and Site-Ib), as well as four kinds of pore-surface pockets (denoted as Site-IIIa to Site-IIId, Fig. 2c, d and S9). Summing the N2 molecules at Site-I and Site-III gives a total occupancy of 6 N2/unit, which is consistent with the experimental saturation uptake of 2 N2/Cd. It should be noted that the void ratio of Cd·2N2 is even slightly smaller than that of Cd when adopting the van der Waals radius of a nitrogen atom (1.55 Å) as a probe (Fig. S5). This fact demonstrates that the sudden increase of N2 uptake originates from the framework deformation rather than the host expansion (Fig. S10). Density functional theory (DFT) simulations produced potential energy surfaces (PESs) for inserting N2 molecules into the rigid pockets (Fig. 2b). Outside the pocket, the host–guest binding is energetically favored and follows a Zn > Mn > Cd trend. Inside the pocket, the energy trends are reversed but still indicate better accessibility for larger pockets.

To further investigate the molecular recognition behaviors of the molecular pockets, H2, possessing a smaller molecule size (Table S3), was selected as a guest. All of the isotherms measured at 77 K show type-I characteristics without obvious saturation, which is typical for H2 because this gas can interact weakly with most materials. At 1.2 atm, the H2 uptakes of Zn, Mn and Cd reach 1.13, 2.12, and 1.71 wt%, 16.6, 27.6, and 26.7 mg cm−3, or 1.06, 1.99, and 2.09 H2/M, respectively (Fig. S11). The large H2 uptake of Mn cannot be simply explained by its small molecular weight. Instead, a more important feature of the H2 adsorption isotherm of Mn is that it has the largest slope, which is useful for practical H2 storage applications. For example, taking 0.1–1.2 atm as the working charge–discharge pressure range, Mn and Cd can deliver 75% and 51% of the H2 adsorbed at 1.2 atm, giving usable storage capacities (USCs)31 of 1.60 and 0.88 wt% or 20.7 and 13.6 mg cm−3, respectively.

To explain the abnormal H2 isotherm slope of Mn, loading-dependent adsorption enthalpies were calculated using the Clausius–Clapeyron equation or virial equation using isotherms measured at 77 and 87 K (Fig. 3a, S11–S13). At near-zero loading, the H2 adsorption enthalpies were calculated as 5.9, 5.8, and 7.5 kJ mol−1 (based on the Clausius–Clapeyron equation) for Zn, Mn, and Cd. Note that the large-pore Cd possesses the largest value, in contrast with conventional observations. When the loading increases, the enthalpies of Zn and Cd gradually decrease, similar to other adsorbents. Interestingly, the enthalpy of Mn gradually rises to 7.0 kJ mol−1 at 3.95 H2/unit, meaning that the host can adsorb H2 more easily at higher loadings as reflected by its relatively large isotherm slope. Generally, the adsorption enthalpy decreases as loading increases, because the adsorbate molecules are firstly adsorbed at the strongest site and finally the weakest site. The adsorption enthalpy may sometimes increase as the loading increases because of increased adsorbate–adsorbate interaction and/or structural transformation of the adsorbent. However, both the adsorbate–adsorbate and adsorbent–adsorbate interactions are extremely weak for H2 molecules (reflected by its boiling point and low adsorption enthalpies), so such an increasing adsorption enthalpy profile is unprecedented for H2.32,33 As H2 can hardly induce a structural transformation of the adsorbent,34,35 and it is very difficult to determine the H2 position in crystal structures, we calculated the PES for inserting a H2 molecule into the pockets of Zn, Mn, and Cd, using a DFT method with rigid hosts. As shown in Fig. 3b, all three compounds showed two local minima, located outside and inside the pocket, respectively. For Zn, the more stable one appears outside the pocket (close to Site-II), and the less stable one has a positive binding energy. On the contrary, the more stable ones of Mn and Cd are both inside the pockets, indicating that H2 molecules are in favor of staying outside the pockets in Zn, but tend to enter the pockets in Mn and Cd. In addition, the energy barriers between the two local minima are in line with ZnMn > Cd ≈ 0. All of these sequences can be explained by the sizes of the pockets (including their entrances). Only the pockets of Mn and Cd are large enough for the accommodation of a hydrogen molecule. Therefore, the H2 adsorption of Zn just occurs outside the pockets, giving a normal adsorption behavior. For Mn, H2 is firstly adsorbed in the cavities and channels, giving a low zero-loading enthalpy. However, H2 has a great tendency to overcome the energy barrier between the cavity and the pocket, especially at higher pressures. Therefore, more and more H2 molecules are absorbed in the pockets (the stronger binding sites) at higher pressures, giving the abnormal enthalpy profile and large isotherm slope. The energy barrier of Cd is negligible due to being largest in size, so H2 is adsorbed in the strongest adsorption site or inside the pockets, almost from the beginning. Thus, Cd displays the largest zero-loading adsorption enthalpy and a normal enthalpy trend.

image file: c7sc03067c-f3.tif
Fig. 3 (a) The coverage-dependent H2 adsorption enthalpies (Qst) calculated using the Clausius–Clapeyron equation using original data without fitting (points) and using the virial equation (lines). (b) PES of a H2 molecule inserting into the pore-surface pockets calculated using DFT based on rigid structures. D is the distance between the pocket entrance and the molecular centroid of H2. The insets are four typical host–H2 structures for Mn placed at their corresponding PES positions.

The N2 and H2 sorption experiments demonstrated that a slight change of the metal ion size can readily control the accessibility of the pore-surface pockets. However, N2 and H2 are so small/short and can either stand or lie inside the pockets. To utilize the well-defined electrostatic fields of the pockets, we further measured adsorption isotherms for CO2 and C2H2 possessing large and opposite quadrupole moments, as well as larger/longer molecular sizes/shapes compared with N2 and H2 (Table S3).36 At 195 K, none of the CO2 saturation uptakes of Zn, Mn, and Cd reach 4.0 CO2/unit or any other stoichiometric values (Fig. S14), indicating that the guest molecules are disordered outside of the pockets. The C2H2 adsorption isotherms of Cd and Mn both exhibit one-step behavior, and their saturated uptakes are both 1.98 C2H2/M or 5.94 C2H2/unit, being close to the second-step saturated uptake of N2. The adsorption isotherm of Zn exhibits a multi-step behavior. The saturation uptakes of the two most obvious steps are 1.09 and 2.08 C2H2/Zn, the latter of which indicates that C2H2 must have entered the pockets. The PES of a CO2/C2H2 molecule moving linearly between the bottoms of two pockets in [M3(vtz)6] straightforwardly demonstrates that C2H2 can insert into the pockets of all three compounds, and that the pocket accessibilities are proportional to the metal radius. On the contrary, CO2 cannot enter any of the pockets in any of the compounds as no local minima occur for inside the pockets (Fig. 4). Obviously, [M3(vtz)6] can efficiently recognize the different quadrupole moments of CO2 and C2H2 to realize unprecedented adsorption selectivities. It is worth noting that they can usually choose the best orientations to adapt to the electrostatic field of the pore surface, even in ultra-microporous MOFs like CPL-2 and MAF-2 showing relatively high CO2/C2H2 selectivities.31,37

image file: c7sc03067c-f4.tif
Fig. 4 PES of a CO2/C2H2 molecule moving linearly between the bottoms of two pockets (connected by a channel) in [M3(vtz)6] supposing a rigid host. D is the distance between the centers of the channel and the gas molecule. Inset: a portion of Cd (scaled to fit the abscissa) with three typical guest positions.

As predicted from the low-temperature isotherms, the CO2 adsorption of all three compounds at ambient temperatures is poor with the uptakes no more than 2.23 mmol g−1 at 1 atm (Fig. S15). The C2H2 uptakes of Zn and Mn are also quite low, indicating that their gate-opening pressures at ambient temperatures are higher than 1 atm. Interestingly, the C2H2 uptake of Cd at 1.0 atm is relatively low (2.23 mmol g−1) at 298 K but very high (6.34 mmol g−1) at 273 K (Fig. 5a). Also, the 273 K isotherm shows an obvious S-shape, indicating that the gate-opening pressure is lower and higher than 1 atm at 273 and 298 K, respectively. Such a large adsorption difference at two similar temperatures demonstrates a large slope in the isotherm of 298 K above 1 atm, which is very useful for obtaining a large USC between 1.0 and 1.5 atm (the practical compressed and discharged limits of pure C2H2). Since pure C2H2 explodes above 2 atm, it is stored in gas cylinders below 1.5 atm (for safety) and because gas storage systems cannot discharge below 1.0 atm (cannot outflow automatically), it can provide very limited USCs. Although some porous materials can adsorb large amounts of C2H2 at ambient temperature and pressure (Table S4),38 their USCs are usually very low because saturation is almost or already reached at 1.0 atm. Theoretically, a porous material with an S-shape isotherm whose inflection point is located in the working pressure region must be beneficial in improving the USC. Obviously, a good storage material/method should have not only a high USC but also a low wasting uptake at 1.0 atm.

image file: c7sc03067c-f5.tif
Fig. 5 (a) C2H2 adsorption isotherms of Cd at 273, 283 and 298 K. The predicted isotherm was obtained based on the Clausius–Clapeyron equation and isotherms measured at 273, 283, and 298 K. The two dashed lines represent the practical working limits of the charging and discharging pressures. (b) Comparison of the USCs and utilization ratios for C2H2 storage parameters of representative MOFs.

Based on adsorption isotherms measured at 273, 283, and 298 K, the 298 K isotherm was extrapolated to give an uptake of 3.53 mmol g−1 at 1.5 atm (Fig. 5a and S16), meaning a USC (at 1.0–1.5 atm) of 1.30 mmol g−1 or 1.99 mmol cm−3 was determined, being 98 times that of a gas cylinder (0.0204 mmol cm−3), and also much higher than all other known adsorbents (Fig. 5b and Table S4). Besides USC, the relative ratio between USC and the wasting uptake at 1.0 atm can also be used as a specific parameter (denoted as the C2H2 utilization ratio) to evaluate the efficiency of a storage system, which is determined by the shape of the adsorption isotherm. The C2H2 utilization ratios of porous materials are generally much lower than 50% because their type-I isotherms or quasi type-I isotherms exhibit smaller slopes at higher pressures. A few porous materials with weak C2H2 adsorption affinities can show linear isotherm shapes (such as MAF-4 (ref. 39) and MAF-7 (ref. 40)), just like the gas cylinder, to give approximately 50% utilization ratio, but their USCs are relatively low. Remarkably, the C2H2 utilization ratio of Cd reaches 58%, because the isotherm increases along with the pressure in the working pressure range.


By using the tiny differences between metal ions, the pore structures of a series of isostructural ultramicroporous MOFs have been continuously regulated with the precision of a hundredth of a nanometer leading to interesting size and quadrupole-moment recognition behaviors, being useful for gas adsorption, separation and storage. In situ SCXRD analyses and computational simulations played critical roles in revealing the structural and energetic mechanisms. For instance, without SCXRD, the great structural difference between Cd and Cd·2N2 would be ignored as in conventional cases (Fig. S1). This work also demonstrates the possibility and strategy for achieving a reversed adsorption sequence at energetically different adsorption sites.

Conflicts of interest

There are no conflicts to declare.


This work was supported by the “973 Project” (2014CB845602), NSFC (21290173, 21473260, 91622109, and 21731007), and the National Postdoctoral Program for Innovative Talents (BX201600195).

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Electronic supplementary information (ESI) available: Experimental section, PXRD patterns, crystallographic tables and characterization details. CCDC 1561837–1561845. For ESI and crystallographic data in CIF or other electronic format see DOI: 10.1039/c7sc03067c

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