Issue 42, 2017

Cancer classification with a network of chemical oscillators

Abstract

We discuss chemical information processing considering dataset classifiers formed with a network of interacting droplets. Our arguments are based on computer simulations of droplets in which a photosensitive variant of the Belousov–Zhabotinsky (BZ) reaction proceeds. By applying optical control we can adjust the time evolution of individual droplets and prepare the network to perform a specific computational task. We demonstrate that chemical classifiers made of droplets can be designed in computer simulations based on evolutionary algorithms. The mutual information between the dataset and the observed time evolution of droplets in the network is taken as the fitness function in the optimization process. We show that a classifier of the Wisconsin Breast Cancer Dataset made of a relatively small number of droplets can distinguish between malignant and benign forms of cancer with an accuracy exceeding 97%. The reliability of the optimized chemical classifiers of this dataset as a function of optimization time, number of droplets involved in data processing and the method of extracting the output information is discussed.

Graphical abstract: Cancer classification with a network of chemical oscillators

Article information

Article type
Paper
Submitted
18 Aug 2017
Accepted
11 Oct 2017
First published
11 Oct 2017
This article is Open Access
Creative Commons BY license

Phys. Chem. Chem. Phys., 2017,19, 28808-28819

Cancer classification with a network of chemical oscillators

K. Gizynski and J. Gorecki, Phys. Chem. Chem. Phys., 2017, 19, 28808 DOI: 10.1039/C7CP05655A

This article is licensed under a Creative Commons Attribution 3.0 Unported Licence. You can use material from this article in other publications without requesting further permissions from the RSC, provided that the correct acknowledgement is given.

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